Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 45.65 | 99.4 |
| CDY49799 | Canola | mitochondrion | 93.68 | 94.19 |
| CDY21007 | Canola | plastid | 88.18 | 90.5 |
| CDY31209 | Canola | plastid | 87.35 | 88.9 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 86.07 | 85.83 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 17.05 | 79.83 |
| KRH51091 | Soybean | plastid | 62.05 | 62.57 |
| KRH20852 | Soybean | plastid | 65.72 | 62.4 |
| KRH11434 | Soybean | plastid | 65.9 | 61.66 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 67.55 | 59.92 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 57.29 | 55.8 |
| KXG27148 | Sorghum | mitochondrion, plastid | 58.3 | 53.4 |
| Os04t0624600-01 | Rice | plastid | 59.12 | 53.04 |
| Zm00001d002256_P012 | Maize | plastid | 57.75 | 53.03 |
| Zm00001d026337_P013 | Maize | plastid | 57.75 | 52.9 |
| TraesCS2B01G491700.2 | Wheat | plastid | 58.39 | 49.92 |
| TraesCS2A01G468800.1 | Wheat | plastid | 58.85 | 49.12 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 68.56 | 48.95 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 59.03 | 48.46 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 58.48 | 45.47 |
| GSMUA_Achr11P... | Banana | plastid | 41.06 | 44.05 |
| Os08t0191433-01 | Rice | plastid | 54.63 | 38.38 |
| TraesCS1B01G119300.1 | Wheat | plastid | 55.91 | 37.89 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 55.0 | 37.66 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 55.55 | 37.57 |
| TraesCS1A01G091500.1 | Wheat | plastid | 55.64 | 37.26 |
| Zm00001d000002_P002 | Maize | plastid | 56.28 | 36.61 |
| KXG24650 | Sorghum | plastid | 56.37 | 36.52 |
| CDY08902 | Canola | plastid | 26.03 | 27.84 |
| CDX76534 | Canola | plastid | 25.85 | 27.65 |
| CDX80428 | Canola | plastid | 15.22 | 25.5 |
| CDY37538 | Canola | plastid | 15.67 | 25.26 |
| CDX88091 | Canola | plastid | 15.03 | 25.19 |
| CDY43274 | Canola | plastid | 15.95 | 24.93 |
| CDY34695 | Canola | plastid | 3.12 | 23.78 |
| CDY45619 | Canola | plastid | 12.92 | 21.4 |
| CDY08760 | Canola | plastid | 12.56 | 19.97 |
| CDY55806 | Canola | plastid | 8.98 | 17.72 |
| CDY71840 | Canola | plastid | 4.77 | 17.22 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 5.68 | 15.58 |
| CDX73274 | Canola | plastid | 4.95 | 14.14 |
| CDY21006 | Canola | nucleus | 0.09 | 0.5 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | GO:A0A078E792 | InterPro:CBM25 | EnsemblPlants:CDX97980 |
| ProteinID:CDX97980 | ProteinID:CDX97980.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 | InterPro:GS/SS | EnsemblPlantsGene:GSBRNA2T00105335001 |
| InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF341 | MetaCyc:PWY-622 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | UniPathway:UPA00164 |
| UniParc:UPI0004EF2DF3 | SEG:seg | : | : | : | : |
Description
BnaA06g07310D
Coordinates
chrLK031902:+:341070..345940
Molecular Weight (calculated)
124096.0 Da
IEP (calculated)
6.319
GRAVY (calculated)
-0.459
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMCWQIQRP ASLRLVLHQK GRLKINTCIG FLHPHPKSYS FSSLASLESQ YSSNGFLHQI TATTDFSRKK QGRMSASGPK SSAPTGFGRR TSAQKKNVEK
0101: DSNATSTVTN EVLRISNLPE AKAIVENQSS EVFGERNVLD RSETEDGSNQ VDNKITEDDA LLQVKIKAER ENLRRKEIEA LAEETLLRGD RMFVYPLTAK
0201: PDEDIEVFLN ITLSTLNKEP DVLIMGAFND WRWKSFTRIL EKTWINGDWL SCLVHIPKEA YKIDFVFFNG QSVYDNNNSK DFIIDIKNGM DKVEFENFLL
0301: EEKWREQEKL AKEEAERERE EEEKRRIEAR KAAIEADRAQ AKAETQRRRE MLQQALEKAV VSARNVWYIE PSNFKGGDRV KLYYNKSSGP LANAKEIWTH
0401: GGFNNWVDGL SIAEKLVDAE LEDDSKSGDW WFAEVIVPVR ALVIDWVFAD GPPEGAFLYD NNSRQDFHAL VPLTTPEEVY WSEEEDLMFR KLQEERRLKE
0501: EAMRVKMEKT GRLKAETKER TLKKFLLSQK DVVYTEPLEI QAGSSVTVLY NPSNTVLKGK PEVWFRGSFN RWTHRLGPLP PQKMEAADDG SSHLKTSAKV
0601: PLDAYMMDFV FSEKEDGGVF DNKDGLDYHL PVVGGIAKEP PLHIVHIAVE MAPIAKVGGL GDVVTSLSRA VQELNHNVDI IFPNYDCIKY NFVKDLQFNR
0701: SYHWGGTEIK VWHGKVEGVS VYFLDPQNGL FQRGCVYGCA DDAGRFGFFC HAALEFLLQG GFHPDILHCH DWSSAPVSWL FKDHYTHYGL VKTRVVFTIH
0801: NLEFGAGAIG KAMKFSDKAT TVSRTYAKEV AGNSVISPHL YKFHGIVNGI DPDIWDPYND NFIPVPYTSE NVLEGKRAAK EELQKRLGLK SSDLPLVGII
0901: TRLTHQKGIH LIKHAIWRTL ERNGQQVVLL GSAPDPRIQN DFVNLANQLH STHGDRARLV LTYDEPLSHL IYAGADFILV PSIFEPCGLT QLIAMRYGSV
1001: PIVRKTGGLY DTVFDVDHDK ERAQAQVLEP NGFSFDGADA PGVDYALNRA ISAWYDGREW FNSLCKTVME QDWSWNRPAL EYIELYHSAR K
0101: DSNATSTVTN EVLRISNLPE AKAIVENQSS EVFGERNVLD RSETEDGSNQ VDNKITEDDA LLQVKIKAER ENLRRKEIEA LAEETLLRGD RMFVYPLTAK
0201: PDEDIEVFLN ITLSTLNKEP DVLIMGAFND WRWKSFTRIL EKTWINGDWL SCLVHIPKEA YKIDFVFFNG QSVYDNNNSK DFIIDIKNGM DKVEFENFLL
0301: EEKWREQEKL AKEEAERERE EEEKRRIEAR KAAIEADRAQ AKAETQRRRE MLQQALEKAV VSARNVWYIE PSNFKGGDRV KLYYNKSSGP LANAKEIWTH
0401: GGFNNWVDGL SIAEKLVDAE LEDDSKSGDW WFAEVIVPVR ALVIDWVFAD GPPEGAFLYD NNSRQDFHAL VPLTTPEEVY WSEEEDLMFR KLQEERRLKE
0501: EAMRVKMEKT GRLKAETKER TLKKFLLSQK DVVYTEPLEI QAGSSVTVLY NPSNTVLKGK PEVWFRGSFN RWTHRLGPLP PQKMEAADDG SSHLKTSAKV
0601: PLDAYMMDFV FSEKEDGGVF DNKDGLDYHL PVVGGIAKEP PLHIVHIAVE MAPIAKVGGL GDVVTSLSRA VQELNHNVDI IFPNYDCIKY NFVKDLQFNR
0701: SYHWGGTEIK VWHGKVEGVS VYFLDPQNGL FQRGCVYGCA DDAGRFGFFC HAALEFLLQG GFHPDILHCH DWSSAPVSWL FKDHYTHYGL VKTRVVFTIH
0801: NLEFGAGAIG KAMKFSDKAT TVSRTYAKEV AGNSVISPHL YKFHGIVNGI DPDIWDPYND NFIPVPYTSE NVLEGKRAAK EELQKRLGLK SSDLPLVGII
0901: TRLTHQKGIH LIKHAIWRTL ERNGQQVVLL GSAPDPRIQN DFVNLANQLH STHGDRARLV LTYDEPLSHL IYAGADFILV PSIFEPCGLT QLIAMRYGSV
1001: PIVRKTGGLY DTVFDVDHDK ERAQAQVLEP NGFSFDGADA PGVDYALNRA ISAWYDGREW FNSLCKTVME QDWSWNRPAL EYIELYHSAR K
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.