Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73274 | Canola | plastid | 1.98 | 1.05 |
| CDY21007 | Canola | plastid | 0.5 | 0.09 |
| CDY31209 | Canola | plastid | 0.5 | 0.09 |
| CDY49799 | Canola | mitochondrion | 0.5 | 0.09 |
| CDX97980 | Canola | plastid | 0.5 | 0.09 |
| CDY43274 | Canola | plastid | 0.0 | 0.0 |
| Zm00001d051976_P002 | Maize | plastid | 0.0 | 0.0 |
| VIT_07s0205g00110.t01 | Wine grape | cytosol, nucleus | 0.0 | 0.0 |
| Solyc02g091770.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Solyc02g091760.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400078688 | Potato | cytosol | 0.0 | 0.0 |
| Os02t0807100-01 | Rice | plastid | 0.0 | 0.0 |
| KXG31317 | Sorghum | plastid | 0.0 | 0.0 |
| HORVU0Hr1G005540.2 | Barley | cytosol | 0.0 | 0.0 |
| CDY71840 | Canola | plastid | 0.0 | 0.0 |
| CDY55806 | Canola | plastid | 0.0 | 0.0 |
| CDY45619 | Canola | plastid | 0.0 | 0.0 |
| CDY37538 | Canola | plastid | 0.0 | 0.0 |
| CDY34695 | Canola | plastid | 0.0 | 0.0 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 0.0 | 0.0 |
| CDY08902 | Canola | plastid | 0.0 | 0.0 |
| CDY08760 | Canola | plastid | 0.0 | 0.0 |
| CDX88091 | Canola | plastid | 0.0 | 0.0 |
| CDX80428 | Canola | plastid | 0.0 | 0.0 |
| CDX76534 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY21006 | EnsemblPlantsGene:GSBRNA2T00015163001 | InterPro:Cystatin-related_pln | PANTHER:PTHR31228 | PANTHER:PTHR31228:SF7 | ProteinID:CDY21006 |
| ProteinID:CDY21006.1 | SEG:seg | TIGRFAMs:TIGR01638 | UniParc:UPI0004EE0235 | UniProt:A0A078G6D0 | MapMan:35.2 |
Description
BnaA08g25190DBnaA08g25190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6D0]
Coordinates
chrLK032115:+:297374..298306
Molecular Weight (calculated)
23184.5 Da
IEP (calculated)
4.956
GRAVY (calculated)
-0.703
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVDAAKRAP TRDSLAEEEQ SSSPMKKQKV EEEEKIYSET HVPELGCKPQ WDVDSYDGRE YESDPEDRKL FSDDEEYDKY RRERRRAFDS KGFIYEPLSG
101: NYPIKDLEAL VYPNVTSREL MTDLANLCVK KLNETEKKTV ELVEIVRVIV LGGGTRKAYI TFMARESLNG PLIEYQAKVV TYAKNLKPPV PILCRPSPIP
201: SV
101: NYPIKDLEAL VYPNVTSREL MTDLANLCVK KLNETEKKTV ELVEIVRVIV LGGGTRKAYI TFMARESLNG PLIEYQAKVV TYAKNLKPPV PILCRPSPIP
201: SV
001: MAPESTVKQA STTDMVNSSL MEEHKVEEEE EDGGSDIDRR YKYVPGPEPE WDVDSYDGRE YESDPEDRQI FSDEDEYNEY RIRKRQAFAS KGFIPEPLSG
101: IYPIKYLDEI AYRNMTAREL MTNLANLCVK KLNDEKGQTV ELVEIVRVID SGGFRWYSYI TFMAREYPNG PLVEYQAKVM NYAGNEKPPF PILCRPSPKL
201: SV
101: IYPIKYLDEI AYRNMTAREL MTNLANLCVK KLNDEKGQTV ELVEIVRVID SGGFRWYSYI TFMAREYPNG PLVEYQAKVM NYAGNEKPPF PILCRPSPKL
201: SV
Arabidopsis Description
Cystatin/monellin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KFM6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.