Factsheet for VIT_07s0205g00110.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g091770.1.1	Tomato	mitochondrion	26.34	42.38
PGSC0003DMT400078688	Potato	cytosol	21.19	26.41
KXG31317	Sorghum	plastid	30.66	21.35
Zm00001d051976_P002	Maize	plastid	22.22	20.61
Solyc02g091760.1.1	Tomato	cytosol	5.97	15.51
VIT_07s0205g00090.t01	Wine grape	plastid	6.58	14.61
VIT_11s0065g00150.t01	Wine grape	plastid	18.11	14.55
VIT_15s0048g02600.t01	Wine grape	plastid	15.43	12.21
VIT_02s0025g02790.t01	Wine grape	plastid	14.61	11.74
VIT_10s0003g02880.t01	Wine grape	plastid	23.66	11.37
VIT_16s0098g01780.t01	Wine grape	plastid	14.4	11.06
Os02t0807100-01	Rice	plastid	6.38	10.0
VIT_14s0108g00940.t01	Wine grape	plastid	16.05	9.75
CDY21007	Canola	plastid	19.55	8.94
VIT_10s0116g01730.t01	Wine grape	plastid	20.37	6.48
HORVU0Hr1G005540.2	Barley	cytosol	2.26	1.09
CDY21006	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.40.50.2000	Gene3D:3.60.10.10	MapMan:35.1	ProteinID:CCB45173.1	ncoils:Coil	InterPro:Endo/exonu/phosph_ase_sf
UniProt:F6GYY7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006810	GO:GO:0006886
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016020
GO:GO:0016192	GO:GO:0016740	GO:GO:0016757	GO:GO:0016787	GO:GO:0046872	GO:GO:0090305
InterPro:IPR036691	PANTHER:PTHR12526	PANTHER:PTHR12526:SF382	SUPFAM:SSF53756	SUPFAM:SSF56219	TIGR:TC61076
UniParc:UPI000210A919	ArrayExpress:VIT_07s0205g00110	EnsemblPlantsGene:VIT_07s0205g00110	EnsemblPlants:VIT_07s0205g00110.t01	SEG:seg	:

Description

UDP-Glycosyltransferase superfamily protein [Source:TAIR;Acc:AT5G65685](projected from arabidopsis_thaliana,AT5G65685)

Coordinates

chr7:+:15177551..15197749

Molecular Weight (calculated)

50927.1 Da

IEP (calculated)

6.889

GRAVY (calculated)

-0.164

Length

486 amino acids

Sequence
(BLAST)

001: MGETVESNDS SKRRVIKAVI RSQRVDLFCL QETKIQTLSE GLVRSLGSGR WSNWVALDAL GSIGGMLVCW DKRSLEVMET EVGNFSISCR IRNVEDGLTW
101: ILTGVKRPFS KKDRDCLWEE LGAIRGLWED PGCLGGDFNV ILSQRERNRQ GRLTGAMRSF AQTVDEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: SLGFYSKNLQ GGVVYSNKVV IMSSMHSKAS IIHSLSHGLE STFTIHKDKL LIAPYGFDKF TWDPSRDKFL PENYTADNMK GKAVCKVALQ QHLGLTEHAS
301: VILVGCIFSE VSDVDVENLK EVVLIASRRD VQFVFTRLSK VPSKNTSLDS FLEEIKDENV RFIDKCDEAL SHLIFAGSDI ILCPSFHDPM LQVPLKAMRY
401: GAAPIAITSI GKRFRHVVDH DFQSTKLSQF LNTTFAYMSL NEALDEIKSN SMQWNQKIMD AMTKDFSWDA ECYDIHISAY TALKNL

Best Arabidopsis Sequence Match ( AT4G18240.1 )
(BLAST)

0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT

Arabidopsis Description

SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.