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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400078688 Potato cytosol 86.1 41.28
VIT_07s0205g00090.t01 Wine grape plastid 47.59 40.64
Os02t0807100-01 Rice plastid 39.04 23.55
AT5G65685.5 Thale cress extracellular, golgi 48.66 18.02
KRH74428 Soybean plastid 62.03 16.96
Bra024412.1-P Field mustard plastid 51.87 16.36
CDY45619 Canola plastid 51.87 14.72
CDY08760 Canola plastid 52.41 14.29
KXG31317 Sorghum plastid 44.92 12.03
Solyc07g042830.2.1 Tomato plastid 22.46 6.84
Solyc02g071040.2.1 Tomato nucleus 35.83 6.69
Zm00001d051976_P002 Maize plastid 17.65 6.3
VIT_07s0205g00110.t01 Wine grape cytosol, nucleus 15.51 5.97
Solyc03g083090.2.1 Tomato plastid 17.11 4.99
Solyc08g083320.2.1 Tomato plastid 13.9 4.32
Solyc02g088000.2.1 Tomato nucleus, plastid 17.11 4.17
Solyc02g080570.2.1 Tomato nucleus, plastid 25.67 3.9
CDY21007 Canola plastid 21.93 3.86
Solyc02g091770.1.1 Tomato mitochondrion 5.35 3.31
KRH39530 Soybean cytosol 2.14 1.45
HORVU0Hr1G005540.2 Barley cytosol 1.07 0.2
CDY21006 Canola nucleus 0.0 0.0
Protein Annotations
EnsemblPlants:Solyc02g091760.1.1EnsemblPlantsGene:Solyc02g091760.1Gene3D:3.40.50.2000InterPro:Starch_synth_cat_domKEGG:00500+2.4.1.21PANTHER:PTHR12526
PANTHER:PTHR12526:SF382PFAM:PF08323SUPFAM:SSF53756UniParc:UPI0002767B6CUniProt:K4BCX4MapMan:35.1
Description
No Description!
Coordinates
chr2:+:52981495..52983258
Molecular Weight (calculated)
21043.3 Da
IEP (calculated)
4.816
GRAVY (calculated)
0.181
Length
187 amino acids
Sequence
(BLAST)
001: MVLTSLIGSK EASEFRRLVM DSIDSIADYF SQIMHKQDTE LLVELSGDHI IHICTEMAPV ASVGSLAPYV TGLSRALQRK GNLVEVILPK YASLNLNEVL
101: GLREVEAEFH SYFNGQLHGN RIWTGVVCGI GVTFVEPLYY SAFFGCENIY GYSNDFERFV NSIQITLQLN EVGKEFHISY CLPFLNF
Best Arabidopsis Sequence Match ( AT5G65685.10 )
(BLAST)
001: MILNKQRLAA VDELEQLKKD KEELLERINQ LEAESQIVIK KDKSSLFWEL LLRIDSMVIN GLVNIEEASS MRKLVKEHEA NISVFPLDVL QQGDAEILAE
101: LRRFTNKGKR NGLHVIHICT EMAPLVSVGP LASYITGLSC ALQEEGYMVE VILPKYSTLD LDEIEGLREI EADAYSYFDG QLHANRIWNG VVSGIGVTLI
201: QPVYYSSMFS RDKVYGYQDD FDRFAYFSRA SLDYIAKSGK QPDVLHIHNW QTAIVGPLFW DVFVNQGLEG TRILLTCQDF DKGLVPPEKL ELCGLDPAEL
301: HRLDRLQDNT NPHFVNILKG GVVYSNKVVI MSSSHSSIPG LEPTLAIHKD KLFFAPFGMD NSMEKDLCCD LHVSAYTSIK NL
Arabidopsis Description
UDP-Glycosyltransferase superfamily protein [Source:TAIR;Acc:AT5G65685]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.