Factsheet for Bra024412.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08760	Canola	plastid	97.13	83.97
AT5G65685.5	Thale cress	extracellular, golgi	62.23	73.07
VIT_07s0205g00090.t01	Wine grape	plastid	21.92	59.36
PGSC0003DMT400078688	Potato	cytosol	37.1	56.41
Solyc02g091760.1.1	Tomato	cytosol	16.36	51.87
Solyc02g091770.1.1	Tomato	mitochondrion	24.28	47.68
KRH74428	Soybean	plastid	50.76	44.01
Zm00001d051976_P002	Maize	plastid	32.88	37.21
KXG31317	Sorghum	plastid	42.83	36.39
Os02t0807100-01	Rice	plastid	18.89	36.13
KRH39530	Soybean	cytosol	12.98	28.0
Bra021017.1-P	Field mustard	plastid	29.51	17.16
Bra009747.1-P	Field mustard	plastid	13.32	12.14
Bra021487.1-P	Field mustard	cytosol	7.25	11.59
Bra039138.1-P	Field mustard	plastid	14.67	11.28
Bra010189.1-P	Field mustard	nucleus	13.49	10.93
Bra021486.1-P	Field mustard	endoplasmic reticulum	3.88	10.9
Bra019836.1-P	Field mustard	endoplasmic reticulum, vacuole	8.09	9.58
Bra016818.1-P	Field mustard	cytosol	18.89	8.53
HORVU0Hr1G005540.2	Barley	cytosol	3.2	1.88

Protein Annotations

EnsemblPlants:Bra024412.1	EnsemblPlants:Bra024412.1-P	EnsemblPlantsGene:Bra024412	Gene3D:3.40.50.2000	InterPro:Starch_synth_cat_dom	KEGG:00500+2.4.1.21
ncoils:Coil	PANTHER:PTHR12526	PANTHER:PTHR12526:SF382	PFAM:PF08323	SUPFAM:SSF53756	UniParc:UPI000253EEA6
UniProt:M4E6K8	MapMan:35.1	:	:	:	:

Description

AT5G65685 (E=4e-171) | soluble glycogen synthase-related

Coordinates

chrA06:-:15629680..15633294

Molecular Weight (calculated)

66802.4 Da

IEP (calculated)

5.878

GRAVY (calculated)

-0.206

Length

593 amino acids

Sequence
(BLAST)

001: MQSAANFPLK WNLSPLVSSS KVQLVNLKFR KAHALHCLRS EGHEEKFENS SQDKLGVSSV IKEDKHKDIW SLFREAQQNI LYLNKQRLAA VEELEKLKNE
101: RVELLEKINQ LEEESHIVVK KDKSSILWEL LLRVDSMVLN GLIGTEEASS MRQLVREHQA NISEFPLDVL QQGDAQVLAE LRQLPNRGKR NGLHVIHICT
201: EMDPLVSVGP LASYITGLSC ALQGKGYLVE VILPKYSTLD LDEVEGLREI EADAYSYFNG QLHANRIWNG VVSGVGVTLI QPVYYGSMFS RDKVYGYSDD
301: VDRFAYFSRA SLDYIAKSGK QPDVLHIHNW QTAIVGPLFW DVFVNQGLEG TRILLTCQGF DSKASHVASF LFFPLCLVPP EKLELCGLDP ASVHRADRLQ
401: DNTNPQLVNL LKGGIVYSNK VVIMPSSPSE GRTLHRNSIP GLEPTLAVHK EKLCFAPFGL DNSKWDPSID VYLPENYSAE DIKGKSICKA ELQRQLGLVE
501: DVSTTIVGCI FSEISGVDLQ SLKSLVRRTA KNDVQFVIMM MNEDQMIIKE LEKAQDEIEK KDGRLWELKI MEAMEKDLCC DVHVSAYTSI KNL

Best Arabidopsis Sequence Match ( AT5G65685.1 )
(BLAST)

001: MQATANLPTI WNLSLRGSSS KVHIVNPRHR KSHALHCLRS EGHEEFDNSQ KSLGQSSITK EAKHKDIWNL FREAQKNIMI LNKQRLAAVD ELEQLKKDKE
101: ELLERINQLE AESQIVIKKD KSSLFWELLL RIDSMVINGL VNIEEASSMR KLVKEHEANI SVFPLDVLQQ GDAEILAELR RFTNKGKRNG LHVIHICTEM
201: APLVSVGPLA SYITGLSCAL QEEGYMVEVI LPKYSTLDLD EIEGLREIEA DAYSYFDGQL HANRIWNGVV SGIGVTLIQP VYYSSMFSRD KVYGYQDDFD
301: RFAYFSRASL DYIAKSGKQP DVLHIHNWQT AIVGPLFWDV FVNQGLEGTR ILLTCQDFDK GLVPPEKLEL CGLDPAELHR LDRLQDNTNP HFVNILKGGV
401: VYSNKVVIMS SSHSSIPGLE PTLAIHKDKL FFAPFGMDNS MEKDLCCDLH VSAYTSIKNL

Arabidopsis Description

UDP-Glycosyltransferase superfamily protein [Source:TAIR;Acc:AT5G65685]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.