CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74428	Soybean	plastid	89.09	35.82
Solyc02g091770.1.1	Tomato	mitochondrion	32.0	29.14
CDY45619	Canola	plastid	40.73	17.0
CDY08760	Canola	plastid	39.64	15.89
KRH01182	Soybean	cytosol	15.27	15.79
KXG31317	Sorghum	plastid	34.55	13.61
Zm00001d051976_P002	Maize	plastid	25.45	13.36
PGSC0003DMT400078688	Potato	cytosol	18.55	13.08
Bra024412.1-P	Field mustard	plastid	28.0	12.98
KRH16258	Soybean	extracellular	5.09	10.29
KRH47803	Soybean	nucleus	22.55	10.02
KRH06370	Soybean	nucleus, plastid	22.18	9.85
KRH53506	Soybean	plastid	20.36	8.83
KRG92546	Soybean	plastid	18.91	8.6
KRH34245	Soybean	plastid	18.91	8.55
KRH64431	Soybean	plastid	20.0	8.45
KRG93537	Soybean	plastid	22.91	8.14
KRH18473	Soybean	plastid	22.91	8.12
KRH42312	Soybean	nucleus	27.27	7.58
KRH58438	Soybean	nucleus	26.91	7.48
KRH51091	Soybean	plastid	21.82	5.55
AT5G65685.5	Thale cress	extracellular, golgi	9.45	5.15
KRH20852	Soybean	plastid	21.45	5.13
KRH11434	Soybean	plastid	21.45	5.06
Solyc02g091760.1.1	Tomato	cytosol	1.45	2.14
VIT_07s0205g00090.t01	Wine grape	plastid	0.73	0.91
Os02t0807100-01	Rice	plastid	0.36	0.32
KRH15937	Soybean	plastid	0.0	0.0
HORVU0Hr1G005540.2	Barley	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02005942	EnsemblPlants:KRH39530	EnsemblPlantsGene:GLYMA_09G203700	Gene3D:3.40.50.2000	PANTHER:PTHR12526	PANTHER:PTHR12526:SF382
ProteinID:KRH39530	ProteinID:KRH39530.1	SUPFAM:SSF53756	UniParc:UPI0006ED95EB	UniProt:A0A0R0IB07	MapMan:35.1

Description

hypothetical protein

Coordinates

chr9:+:42804075..42806863

Molecular Weight (calculated)

30959.0 Da

IEP (calculated)

5.158

GRAVY (calculated)

-0.119

Length

275 amino acids

Sequence
(BLAST)

001: GGVVYSNRVV IMSSIYPEHY STWKITFGCR GKLVIAPYGL DKSTWDPLTD YFLPENFNAE NMNGKAVCKA ALLQQLGLSE HSSAILVGCI FSEGRDLDEK
101: RVEEVILNAK QHDVQFIFMG ASKRSVLNQA PESLQKEFKD DNLKFVPTYD EALLHLVFAG SDIILCQSFL DPTDEIPLIA LRYGAAPLAL VPDASSNRSI
201: PFDRSFINQD HEATKYSKLI NSSFVNMFIS LAIDEIRTNP AMWKRKIMQA MAHDLSWDGE CYDVHVEAYS TIKNM

Best Arabidopsis Sequence Match ( AT4G18240.1 )
(BLAST)

0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT

Arabidopsis Description

SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.