CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53506	Soybean	plastid	91.55	94.01
KRH16258	Soybean	extracellular	14.9	71.32
TraesCS7B01G018600.1	Wheat	cytosol	56.99	71.21
Zm00001d045261_P006	Maize	plastid	58.68	68.21
VIT_16s0098g01780.t01	Wine grape	plastid	65.75	67.61
Solyc03g083090.2.1	Tomato	plastid	64.98	65.99
PGSC0003DMT400047731	Potato	plastid	64.52	65.52
HORVU7Hr1G025390.4	Barley	cytosol, plastid	57.6	65.22
AT5G24300.1	Thale cress	plastid	64.67	64.57
Bra009747.1-P	Field mustard	plastid	64.21	64.21
CDX88091	Canola	plastid	64.21	64.21
CDX80428	Canola	plastid	63.13	63.13
Os06t0160700-01	Rice	plastid	59.75	60.69
KXG19354	Sorghum	plastid	59.6	59.97
TraesCS7A01G120300.1	Wheat	plastid	58.06	58.7
TraesCS7D01G117800.1	Wheat	plastid	58.99	58.63
GSMUA_Achr3P03290_001	Banana	plastid	58.37	54.99
KRH01182	Soybean	cytosol	21.66	53.01
KRH18473	Soybean	plastid	42.24	35.44
KRG93537	Soybean	plastid	41.94	35.27
KRG92546	Soybean	plastid	32.57	35.04
KRH34245	Soybean	plastid	31.8	34.05
KRH15937	Soybean	plastid	6.61	33.08
KRH06370	Soybean	nucleus, plastid	31.03	32.63
KRH47803	Soybean	nucleus	30.72	32.31
KRH39530	Soybean	cytosol	8.45	20.0
KRH58438	Soybean	nucleus	25.81	16.99
KRH42312	Soybean	nucleus	25.65	16.87
KRH74428	Soybean	plastid	16.59	15.79
KRH51091	Soybean	plastid	25.19	15.16
KRH20852	Soybean	plastid	25.96	14.71
KRH11434	Soybean	plastid	26.11	14.58

Protein Annotations

KEGG:00500+2.4.1.21	EntrezGene:100807354	MapMan:3.2.2.4.1	Gene3D:3.40.50.2000	EMBL:ACUP02002765	EnsemblPlantsGene:GLYMA_04G235200
GO:GO:0003674	GO:GO:0003824	GO:GO:0004373	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009011	GO:GO:0009058
GO:GO:0009501	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0019252	InterPro:GS/SS	InterPro:Glyco_trans_1	UniProt:I1JYR0	EnsemblPlants:KRH64431	ProteinID:KRH64431
ProteinID:KRH64431.1	HAMAP:MF_00484	PFAM:PF00534	PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF431
MetaCyc:PWY-622	SUPFAM:SSF53756	SignalP:SignalP-noTM	InterPro:Starch_synth_cat_dom	TIGRFAMs:TIGR02095	UniParc:UPI0002339F19
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:50342758..50350965

Molecular Weight (calculated)

72400.7 Da

IEP (calculated)

5.207

GRAVY (calculated)

-0.233

Length

651 amino acids

Sequence
(BLAST)

001: MESLELVPLL LLLHPPPSQS FNNSRSIRQL RFPSLLNSKT RNANLRSFSG NLQGGGGATS QDGPFAFEDQ VSHHKDDRAL VLARETDDFG YLVGFRLLPN
101: SGLEEFMNVS HSITEEDSSS DEVEKPKVED TEEEEAKTRV SHNIVVVTSE AAPYSKTGGL ADVCGSLPIA LASRGHRVMV VTPRYIHGTS EDLKFAGAVD
201: LDQSTKVFCF GGAQEIGFYH EYREGVDWVF VDHPSFHRPG NPYGDKFGTF GDNQFRFTLL CHAACEAPLV LPLGGFSYGE KCLFLANDWH ASLVPILLAA
301: KYRPHGVYKD ARSILVIHNI AHQGVEPAIT YRNLGLPSEW YGALEWVFPT WARTHALDTG EAVNFLKGAV VTADRIVTVS KGYSWEITTS EGGCGLHDLL
401: SSRKSILSGI TNGIDVTEWD PSCDKHIACN YSADDLSGKA ECKISLQKEL GLPMRPDCPM IGFIGRLDYQ KGIDLIRLAM PELMEADVQF VMLGSGNPIY
501: EDWMRATESI YKDKFRGWVG FNVPISHKIT AGCDILLMPS AFEPCGLNQL YAMRYGTIPV VHETGGLRDT VHNFNPYAEE SRAESTGWTF SPLTKESMLA
601: ALRYAIQTYN EYKSSWEGLM IRGMTRDYTW VNAATQYEQV IEWAFTDPPY C

Best Arabidopsis Sequence Match ( AT5G24300.2 )
(BLAST)

001: MASLQISGSV KFEPFVGFNR IRHFRPIASL GFPRFRRRFS IGRSLLLRRS SSFSGDSRES DEERFITDAE RDGSGSVLGF QLTPPGDQQT VSTSTGEITH
101: HEEKKEAIDQ IVMADFGVPG NRAVEEGAAE VGIPSGKAEV VNNLVFVTSE AAPYSKTGGL GDVCGSLPIA LAGRGHRVMV ISPRYLNGTA ADKNYARAKD
201: LGIRVTVNCF GGSQEVSFYH EYRDGVDWVF VDHKSYHRPG NPYGDSKGAF GDNQFRFTLL CHAACEAPLV LPLGGFTYGE KSLFLVNDWH AGLVPILLAA
301: KYRPYGVYKD ARSILIIHNL AHQGVEPAAT YTNLGLPSEW YGAVGWVFPT WARTHALDTG EAVNVLKGAI VTSDRIITVS QGYAWEITTV EGGYGLQDLL
401: SSRKSVINGI TNGINVDEWN PSTDEHIPFH YSADDVSEKI KCKMALQKEL GLPIRPECPM IGFIGRLDYQ KGIDLIQTAG PDLMVDDIQF VMLGSGDPKY
501: ESWMRSMEET YRDKFRGWVG FNVPISHRIT AGCDILLMPS RFEPCGLNQL YAMRYGTIPV VHGTGGLRDT VENFNPYAEG GAGTGTGWVF TPLSKDSMVS
601: ALRLAAATYR EYKQSWEGLM RRGMTRNYSW ENAAVQYEQV FQWVFMDPPY VS

Arabidopsis Description

SS1Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QN76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.