CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64431	Soybean	plastid	94.01	91.55
TraesCS7B01G018600.1	Wheat	cytosol	57.57	70.06
KRH16258	Soybean	extracellular	14.98	69.85
VIT_16s0098g01780.t01	Wine grape	plastid	66.25	66.35
Zm00001d045261_P006	Maize	plastid	58.52	66.25
Solyc03g083090.2.1	Tomato	plastid	65.14	64.43
HORVU7Hr1G025390.4	Barley	cytosol, plastid	58.2	64.17
PGSC0003DMT400047731	Potato	plastid	64.51	63.81
AT5G24300.1	Thale cress	plastid	65.3	63.5
Bra009747.1-P	Field mustard	plastid	64.98	63.29
CDX88091	Canola	plastid	64.98	63.29
CDX80428	Canola	plastid	64.04	62.37
KXG19354	Sorghum	plastid	60.25	59.04
Os06t0160700-01	Rice	plastid	59.62	58.97
TraesCS7A01G120300.1	Wheat	plastid	59.15	58.23
TraesCS7D01G117800.1	Wheat	plastid	60.09	58.17
GSMUA_Achr3P03290_001	Banana	plastid	58.36	53.55
KRH01182	Soybean	cytosol	22.08	52.63
KRG92546	Soybean	plastid	33.6	35.21
KRH18473	Soybean	plastid	42.9	35.05
KRG93537	Soybean	plastid	42.43	34.75
KRH34245	Soybean	plastid	32.65	34.05
KRH15937	Soybean	plastid	6.78	33.08
KRH06370	Soybean	nucleus, plastid	32.18	32.96
KRH47803	Soybean	nucleus	31.86	32.63
KRH39530	Soybean	cytosol	8.83	20.36
KRH58438	Soybean	nucleus	26.5	16.99
KRH42312	Soybean	nucleus	26.18	16.77
KRH74428	Soybean	plastid	17.03	15.79
KRH51091	Soybean	plastid	25.87	15.16
KRH20852	Soybean	plastid	26.18	14.45
KRH11434	Soybean	plastid	26.34	14.32

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.1	Gene3D:3.40.50.2000	EMBL:ACUP02003469	EnsemblPlantsGene:GLYMA_06G129400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004373	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009011	GO:GO:0009058	GO:GO:0009501
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0019252
InterPro:GS/SS	InterPro:Glyco_trans_1	UniProt:I1KAT2	EnsemblPlants:KRH53506	ProteinID:KRH53506	ProteinID:KRH53506.1
HAMAP:MF_00484	PFAM:PF00534	PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF431	MetaCyc:PWY-622
SUPFAM:SSF53756	InterPro:Starch_synth_cat_dom	TIGRFAMs:TIGR02095	UniParc:UPI000294DA00	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:10632042..10640023

Molecular Weight (calculated)

70034.9 Da

IEP (calculated)

5.447

GRAVY (calculated)

-0.239

Length

634 amino acids

Sequence
(BLAST)

001: MESLELVPLL LLHPRASPPL QSIRQPRFPS LLNRKTRNAN LRSFSANLQG GGGGATSQGG PFSFEDQTSH HKDDRALLIA RETDDFGYLV GFRLLPDSGL
101: EELMSVSHTI TEEDSSSDEV EKPEIEDTEE EGAKTRVSHN IVFVTSEAAP YSKTGGLADV CGSLPIALAG RGHRVMVVTP RYIHGTPEDL KFAGAVDLDQ
201: STKVFCFGGA QEIGFYHEYR EGVDWVFVDH PSFHRPGNPY GDTFGTFGDN QFRFTLLCHA ACEAPLVLPL GGFTYGEKCL FLANDWHASL VPILLAAKYR
301: PHGVYKDARS ILVIHNIAHQ GVEPAITYSN LGLPPEWYGA LGWVFPTWAR THALDTGEAV NFLKGAVVTS DRIVTVSKGY SWEITTSEGG CGLHDLLSSR
401: KSILSGITNG IDVTEWDPSC DKHIASNYSA DDLSGKAECK ISLQKELGLP VRPDCPMIGF IGRLDYQKGI DLIRLAMPEL MEADVQFVML GSGNPIYEDW
501: MRATESAYKD KFRGWVGFNV PISHKITAGC DILLMPSAFE PCGLNQLYAM RYGTIPVVHE TGGLRDTVHN YNPYTEESKA ESTGWTFSPL TKDSMLAALR
601: YAIQTYNEHK PSWEGLMIRG MTRDYTWVNA ATQY

Best Arabidopsis Sequence Match ( AT5G24300.2 )
(BLAST)

001: MASLQISGSV KFEPFVGFNR IRHFRPIASL GFPRFRRRFS IGRSLLLRRS SSFSGDSRES DEERFITDAE RDGSGSVLGF QLTPPGDQQT VSTSTGEITH
101: HEEKKEAIDQ IVMADFGVPG NRAVEEGAAE VGIPSGKAEV VNNLVFVTSE AAPYSKTGGL GDVCGSLPIA LAGRGHRVMV ISPRYLNGTA ADKNYARAKD
201: LGIRVTVNCF GGSQEVSFYH EYRDGVDWVF VDHKSYHRPG NPYGDSKGAF GDNQFRFTLL CHAACEAPLV LPLGGFTYGE KSLFLVNDWH AGLVPILLAA
301: KYRPYGVYKD ARSILIIHNL AHQGVEPAAT YTNLGLPSEW YGAVGWVFPT WARTHALDTG EAVNVLKGAI VTSDRIITVS QGYAWEITTV EGGYGLQDLL
401: SSRKSVINGI TNGINVDEWN PSTDEHIPFH YSADDVSEKI KCKMALQKEL GLPIRPECPM IGFIGRLDYQ KGIDLIQTAG PDLMVDDIQF VMLGSGDPKY
501: ESWMRSMEET YRDKFRGWVG FNVPISHRIT AGCDILLMPS RFEPCGLNQL YAMRYGTIPV VHGTGGLRDT VENFNPYAEG GAGTGTGWVF TPLSKDSMVS
601: ALRLAAATYR EYKQSWEGLM RRGMTRNYSW ENAAVQYEQV FQWVFMDPPY VS

Arabidopsis Description

SS1Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QN76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.