CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 4
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53506	Soybean	plastid	69.85	14.98
KRH64431	Soybean	plastid	71.32	14.9
KRH01182	Soybean	cytosol	28.68	14.66
TraesCS7B01G018600.1	Wheat	cytosol	54.41	14.2
Zm00001d045261_P006	Maize	plastid	54.41	13.21
VIT_16s0098g01780.t01	Wine grape	plastid	59.56	12.8
HORVU7Hr1G025390.4	Barley	cytosol, plastid	53.68	12.7
Solyc03g083090.2.1	Tomato	plastid	55.15	11.7
TraesCS7A01G120300.1	Wheat	plastid	54.41	11.49
TraesCS7D01G117800.1	Wheat	plastid	55.15	11.45
PGSC0003DMT400047731	Potato	plastid	53.68	11.39
Os06t0160700-01	Rice	plastid	53.68	11.39
KXG19354	Sorghum	plastid	53.68	11.28
Bra009747.1-P	Field mustard	plastid	52.94	11.06
CDX80428	Canola	plastid	52.94	11.06
CDX88091	Canola	plastid	52.94	11.06
AT5G24300.1	Thale cress	plastid	52.94	11.04
GSMUA_Achr3P03290_001	Banana	plastid	52.21	10.28
KRH18473	Soybean	plastid	38.24	6.7
KRG93537	Soybean	plastid	36.76	6.46
KRG92546	Soybean	plastid	27.21	6.12
KRH47803	Soybean	nucleus	27.21	5.98
KRH06370	Soybean	nucleus, plastid	27.21	5.98
KRH34245	Soybean	plastid	26.47	5.92
KRH39530	Soybean	cytosol	10.29	5.09
KRH58438	Soybean	nucleus	23.53	3.24
KRH42312	Soybean	nucleus	23.53	3.23
KRH51091	Soybean	plastid	22.79	2.87
KRH20852	Soybean	plastid	22.06	2.61
KRH11434	Soybean	plastid	22.06	2.57
KRH74428	Soybean	plastid	12.5	2.49
KRH15937	Soybean	plastid	2.21	2.31

Protein Annotations

EMBL:ACUP02008841	EnsemblPlants:KRH16258	EnsemblPlantsGene:GLYMA_14G143800	Gene3D:3.40.50.2000	Gene3D:3.90.180.10	InterPro:GroES-like_sf
PANTHER:PTHR12526	PANTHER:PTHR12526:SF431	ProteinID:KRH16258	ProteinID:KRH16258.1	SUPFAM:SSF50129	SUPFAM:SSF53756
UniParc:UPI0006EDA724	UniProt:A0A0R0GK14	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:29323994..29328623

Molecular Weight (calculated)

15395.0 Da

IEP (calculated)

4.889

GRAVY (calculated)

0.135

Length

136 amino acids

Sequence
(BLAST)

001: MELMSLNGTR HLINILLPTI LLSGKAECKI SLQKELGLLV RPDCPMIGFI GRLDYQKGID LIRLAMPELM EADVQFDTVH NFNPYIEESK AESTEWTFSP
101: VTKDSMLAIM YCGICHTDLH YAKIEWGITM YPVVTG

Best Arabidopsis Sequence Match ( AT5G24300.1 )
(BLAST)

001: MASLQISGSV KFEPFVGFNR IRHFRPIASL GFPRFRRRFS IGRSLLLRRS SSFSGDSRES DEERFITDAE RDGSGSVLGF QLTPPGDQQT VSTSTGEITH
101: HEEKKEAIDQ IVMADFGVPG NRAVEEGAAE VGIPSGKAEV VNNLVFVTSE AAPYSKTGGL GDVCGSLPIA LAGRGHRVMV ISPRYLNGTA ADKNYARAKD
201: LGIRVTVNCF GGSQEVSFYH EYRDGVDWVF VDHKSYHRPG NPYGDSKGAF GDNQFRFTLL CHAACEAPLV LPLGGFTYGE KSLFLVNDWH AGLVPILLAA
301: KYRPYGVYKD ARSILIIHNL AHQGVEPAAT YTNLGLPSEW YGAVGWVFPT WARTHALDTG EAVNVLKGAI VTSDRIITVS QGYAWEITTV EGGYGLQDLL
401: SSRKSVINGI TNGINVDEWN PSTDEHIPFH YSADDVSEKI KCKMALQKEL GLPIRPECPM IGFIGRLDYQ KGIDLIQTAG PDLMVDDIQF VMLGSGDPKY
501: ESWMRSMEET YRDKFRGWVG FNVPISHRIT AGCDILLMPS RFEPCGLNQL YAMRYGTIPV VHGTGGLRDT VENFNPYAEG GAGTGTGWVF TPLSKDSMVS
601: ALRLAAATYR EYKQSWEGLM RRGMTRNYSW ENAAVQYEQV FQWVFMDPPY VS

Arabidopsis Description

SS1Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QN76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.