CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20852	Soybean	plastid	93.48	94.87
Bra019836.1-P	Field mustard	endoplasmic reticulum, vacuole	33.79	78.64
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	15.52	77.68
KRH51091	Soybean	plastid	66.98	72.18
CDY49799	Canola	mitochondrion	61.92	66.54
CDY31209	Canola	plastid	60.89	66.23
CDX97980	Canola	plastid	61.66	65.9
AT1G11720.2	Thale cress	mitochondrion, plastid	61.41	65.45
Solyc02g080570.2.1	Tomato	nucleus, plastid	66.04	62.6
GSMUA_Achr5P00700_001	Banana	plastid	55.66	57.95
Os04t0624600-01	Rice	plastid	57.2	54.85
KXG27148	Sorghum	mitochondrion, plastid	55.92	54.74
Zm00001d002256_P012	Maize	plastid	55.66	54.63
Bra016818.1-P	Field mustard	cytosol	61.06	54.23
Zm00001d026337_P013	Maize	plastid	55.32	54.16
TraesCS2B01G491700.2	Wheat	plastid	57.38	52.43
VIT_10s0116g01730.t01	Wine grape	plastid	67.32	51.37
TraesCS2A01G468800.1	Wheat	plastid	57.38	51.19
HORVU2Hr1G106410.9	Barley	cytosol	56.78	49.81
GSMUA_Achr11P...	Banana	plastid	42.2	48.38
TraesCS2D01G468900.2	Wheat	endoplasmic reticulum, golgi	57.55	47.83
Os08t0191433-01	Rice	plastid	53.34	40.05
HORVU1Hr1G021590.5	Barley	mitochondrion	54.2	39.67
TraesCS1B01G119300.1	Wheat	plastid	54.55	39.5
TraesCS1A01G091500.1	Wheat	plastid	54.55	39.04
TraesCS1D01G100100.1	Wheat	cytosol	53.95	39.0
KXG24650	Sorghum	plastid	55.92	38.72
Zm00001d000002_P002	Maize	plastid	55.49	38.58
KRH01182	Soybean	cytosol	6.86	30.08
KRH58438	Soybean	nucleus	24.36	28.72
KRH42312	Soybean	nucleus	24.1	28.38
KRH47803	Soybean	nucleus	14.07	26.49
KRH06370	Soybean	nucleus, plastid	14.07	26.49
KRH53506	Soybean	plastid	14.32	26.34
KRH64431	Soybean	plastid	14.58	26.11
KRH34245	Soybean	plastid	12.69	24.34
KRG92546	Soybean	plastid	12.61	24.3
KRH18473	Soybean	plastid	15.35	23.07
KRG93537	Soybean	plastid	15.01	22.61
KRH16258	Soybean	extracellular	2.57	22.06
KRH39530	Soybean	cytosol	5.06	21.45
KRH74428	Soybean	plastid	12.44	21.2
KRH15937	Soybean	plastid	1.89	16.92

Protein Annotations

KEGG:00500+2.4.1.21	EntrezGene:100797872	MapMan:3.2.2.4.3	Gene3D:3.40.50.2000	EMBL:ACUP02009209	InterPro:CBM25
ncoils:Coil	EnsemblPlantsGene:GLYMA_15G108000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004373	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009011	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	GO:GO:0019252	GO:GO:0030246	GO:GO:2001070	InterPro:GS/SS	UniProt:I1MFH5
EnsemblPlants:KRH11434	ProteinID:KRH11434	ProteinID:KRH11434.1	HAMAP:MF_00484	PFAM:PF08323	PFAM:PF16760
PANTHER:PTHR12526	PANTHER:PTHR12526:SF341	MetaCyc:PWY-622	SMART:SM01066	SUPFAM:SSF53756	InterPro:Starch_synth_cat_dom
UniParc:UPI000233B44A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:8489418..8500190

Molecular Weight (calculated)

132053.0 Da

IEP (calculated)

5.433

GRAVY (calculated)

-0.464

Length

1166 amino acids

Sequence
(BLAST)

0001: MEMSLQLNCK TVFPYRGGDC VSGVLPRRHS VTFTSGYICS PCKAGWGVSF FRASADFSRK RQQKKVPVAR TKGTAGKGFV PSKKSTRVKK GDTLTSVVSE
0101: VSGGDKKQTV DVNVDADKEG ELEFSQEEKF EAVDRIDEIV RDVGELSLLD ETAGELLLLD ESNEANISVI DEDDEVLELR KEEIPYNGGV GIVEGSSEEG
0201: LFDRARIDEN VKETDTDGEI TEEAVEESSS AADDRINEEA ARLLKLELEA NQRRQEIERI AEEKLSQGMK LFVYPPVVKP DQDIELFLNK NLSTLSEEPD
0301: ILIMGAFNDW KWKSFSIRLN KSDLKGDWWS CQLYVPKEAY KVDFVFFNEQ NVYDNNDQKD FCIPVDGGMD ALAFEDFLLE EKRKELEELA WAQAERERQA
0401: EEQRRMEADR AAKEEDRARA KAEVGRMRET LPQLLKNAVK SIDNVWYIEP SEFKGNELIR LYYNRSSGPL ANANEIWIHG GHNNWKYGLS IVERLVKSVL
0501: KGGEWWYADV VVPDQALVLD WVFADGPPKK AVVYDNNRKQ DFHAIVPMAI PDEQYWVEEE QQIYRKFQEE RRLREEAIRA KAGKTAQMKA ETKERTLKRF
0601: LLSQKHIVFT DPLDVQAGST VTVFYNPSNT NLNGKPEVWF RCSFNRWSHR NGPLPPQRML PAENGTHVKA SVKVPLDAYM MDFVFSESEH GGVFDNKFGM
0701: DYHIPVFGGI VKEPPLHIIH IAVEMAPIAK VGGLGDVVTS LSRAVQDLNH NVDIILPKYD CLNLSNVKDF DYHKSYSWGG TEIKVWHGKV EGLSVYFLEP
0801: QNGFFQVGCV YGRGNDGERF GFFCHAALEF LLQSGFHPDI IHCHDWSSAP AAWLFKDNYA HYGLSKARVV FTIHNLEFGA HSIGKAMAHA DKATTVSPTY
0901: SREIAGNPLI APHLHKFHGI INGIDPDIWD PYNDKFIPES YSSKNVVEGK RASKEALQQR LSLKKADLPL VGIITRLTHQ KGIHLIKHAI WRTLERGGQV
1001: VLLGSAPDPR IQNDFVNLAN ELHSAHHDRA RLCLAYDEPL SHLIYAGADF ILVPSIFEPC GLTQLTAMRY GSVPVVRKTG GLYDTVFDVD HDKDRAQAQG
1101: LEPNGFSFDG ADTGGVDYAL NRAISAWYEG RDWFNSLCKR VMEQDWSWNR PALDYLELYH AARKAE

Best Arabidopsis Sequence Match ( AT1G11720.2 )
(BLAST)

0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK

Arabidopsis Description

ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.