Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97980 | Canola | plastid | 94.19 | 93.68 |
| CDY21007 | Canola | plastid | 89.95 | 91.82 |
| CDY31209 | Canola | plastid | 89.03 | 90.11 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 88.02 | 87.29 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 17.14 | 79.83 |
| KRH51091 | Soybean | plastid | 62.86 | 63.03 |
| KRH20852 | Soybean | plastid | 66.54 | 62.84 |
| KRH11434 | Soybean | plastid | 66.54 | 61.92 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 68.29 | 60.24 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 57.7 | 55.89 |
| KXG27148 | Sorghum | mitochondrion, plastid | 58.25 | 53.06 |
| Zm00001d002256_P012 | Maize | plastid | 57.6 | 52.61 |
| Zm00001d026337_P013 | Maize | plastid | 57.6 | 52.48 |
| Os04t0624600-01 | Rice | plastid | 58.71 | 52.38 |
| TraesCS2B01G491700.2 | Wheat | plastid | 58.43 | 49.69 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 68.94 | 48.95 |
| TraesCS2A01G468800.1 | Wheat | plastid | 58.89 | 48.89 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 59.35 | 48.46 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 58.62 | 45.33 |
| GSMUA_Achr11P... | Banana | plastid | 42.12 | 44.94 |
| Os08t0191433-01 | Rice | plastid | 55.39 | 38.7 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 55.94 | 38.1 |
| TraesCS1B01G119300.1 | Wheat | plastid | 56.22 | 37.89 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 55.85 | 37.57 |
| TraesCS1A01G091500.1 | Wheat | plastid | 56.04 | 37.32 |
| Zm00001d000002_P002 | Maize | plastid | 56.5 | 36.55 |
| KXG24650 | Sorghum | plastid | 56.59 | 36.46 |
| CDY08902 | Canola | plastid | 25.71 | 27.35 |
| CDX76534 | Canola | plastid | 25.71 | 27.35 |
| CDX80428 | Canola | plastid | 15.3 | 25.5 |
| CDY37538 | Canola | plastid | 15.85 | 25.41 |
| CDX88091 | Canola | plastid | 15.12 | 25.19 |
| CDY43274 | Canola | plastid | 16.13 | 25.07 |
| CDY34695 | Canola | plastid | 3.13 | 23.78 |
| CDY45619 | Canola | plastid | 13.0 | 21.4 |
| CDY08760 | Canola | plastid | 12.63 | 19.97 |
| CDY55806 | Canola | plastid | 9.12 | 17.9 |
| CDY71840 | Canola | plastid | 4.79 | 17.22 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 5.71 | 15.58 |
| CDX73274 | Canola | plastid | 4.98 | 14.14 |
| CDY21006 | Canola | nucleus | 0.09 | 0.5 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | GO:A0A078IK45 | UniProt:A0A078IK45 | InterPro:CBM25 |
| EnsemblPlants:CDY49799 | ProteinID:CDY49799 | ProteinID:CDY49799.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 | InterPro:GS/SS |
| EnsemblPlantsGene:GSBRNA2T00093825001 | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 | MetaCyc:PWY-622 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom |
| UniPathway:UPA00164 | UniParc:UPI0004EF29F7 | SEG:seg | : | : | : |
Description
BnaCnng18120DBnaCnng18120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IK45]
Coordinates
chrLK032859:+:80098..85028
Molecular Weight (calculated)
123442.0 Da
IEP (calculated)
6.801
GRAVY (calculated)
-0.464
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMCWQIQRP ASLRLVFHQK GPLKINTCIG FLHPHPKSYS FSSLASLESQ YNSNGFLHQI TASADFSRKK QGRMAASGPK SSSPRGLGRR TTVGSAQKKT
0101: PKKNGEKDSN ATSTVTNEVL EISKLPGAKA DVEKQSSVVF GERNVLDRSE TEVDALLELK LKAERENLRR KEIEALAEET LARGDRMFVY PLTAKPDEDI
0201: EVFLNITLST LNKEPDVLIM GAFNDWRWKS FTRRLEKTWI NGDWLSCLLH IPKEAYKIDF VFFNGQSVYD NNDSKDFCID VKNGMDKVEF ENFLLEEKWR
0301: EQEKLAKEEA ERERQEEEKR RIEARKAAIE ADREQAKAET QKRREMLHQA LEKAVVSARN VWYIEPKNFK GEDKVKLYYN KRSGPLANAK EIWIHGGFNS
0401: WVDGLSIVEK LVDAELKDDS KNGDWWFAEV IVPVRALVID WVFADGPPEG AFLYDNNSRK DFHALVPLTT PEEAYWSEEE DRMFRKLQEE RRLKEEAMRV
0501: KMEKTARLKA ETKERTLKMF LLSQKDVVYT EPLEIQAGSP VTVLYNPSNT VLNGKPEVWF RGSFNRWTHR LGPLPQKMEA ADDGSSHLKT SAKVPLDAYM
0601: MDFVFSEKED GGMFDNKDGL DYHLPVVGGI AKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELSH NVDIIFPKYD CIKYNFVKDL QFNRSYHWGG
0701: TEIKVWHGKV EGVSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT HYGLIKTRVV FTIHNLEFGA
0801: GAIGKAMTFA DKATTVSRTY AKEVAGNSVI SPHLYKFHGI VNGIDPDIWD PYNDNFIPVP YTSENVLEGK RAAKEELQKR LGLKSADLPL VGIITRLTHQ
0901: KGIHLIKHAI RRTLERNGQQ VVLLGSAPDP RIQNDFVNLA NQLHSTHGDR ARLVLTYDEP LSHLIYAGAD FILVPSIFEP CGLTQLIAMR YGSVPVVRKT
1001: GGLYDTVFDV DHDKERAQAQ VLEPNGFSFD GADAPGVDYA LNRAISAWYD GREWFNSLCK TLMEQDWSWN RPALEYIELY HSARK
0101: PKKNGEKDSN ATSTVTNEVL EISKLPGAKA DVEKQSSVVF GERNVLDRSE TEVDALLELK LKAERENLRR KEIEALAEET LARGDRMFVY PLTAKPDEDI
0201: EVFLNITLST LNKEPDVLIM GAFNDWRWKS FTRRLEKTWI NGDWLSCLLH IPKEAYKIDF VFFNGQSVYD NNDSKDFCID VKNGMDKVEF ENFLLEEKWR
0301: EQEKLAKEEA ERERQEEEKR RIEARKAAIE ADREQAKAET QKRREMLHQA LEKAVVSARN VWYIEPKNFK GEDKVKLYYN KRSGPLANAK EIWIHGGFNS
0401: WVDGLSIVEK LVDAELKDDS KNGDWWFAEV IVPVRALVID WVFADGPPEG AFLYDNNSRK DFHALVPLTT PEEAYWSEEE DRMFRKLQEE RRLKEEAMRV
0501: KMEKTARLKA ETKERTLKMF LLSQKDVVYT EPLEIQAGSP VTVLYNPSNT VLNGKPEVWF RGSFNRWTHR LGPLPQKMEA ADDGSSHLKT SAKVPLDAYM
0601: MDFVFSEKED GGMFDNKDGL DYHLPVVGGI AKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELSH NVDIIFPKYD CIKYNFVKDL QFNRSYHWGG
0701: TEIKVWHGKV EGVSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT HYGLIKTRVV FTIHNLEFGA
0801: GAIGKAMTFA DKATTVSRTY AKEVAGNSVI SPHLYKFHGI VNGIDPDIWD PYNDNFIPVP YTSENVLEGK RAAKEELQKR LGLKSADLPL VGIITRLTHQ
0901: KGIHLIKHAI RRTLERNGQQ VVLLGSAPDP RIQNDFVNLA NQLHSTHGDR ARLVLTYDEP LSHLIYAGAD FILVPSIFEP CGLTQLIAMR YGSVPVVRKT
1001: GGLYDTVFDV DHDKERAQAQ VLEPNGFSFD GADAPGVDYA LNRAISAWYD GREWFNSLCK TLMEQDWSWN RPALEYIELY HSARK
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.