Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P00700_001 | Banana | plastid | 58.21 | 52.86 |
| KRH51091 | Soybean | plastid | 45.53 | 42.79 |
| KRH20852 | Soybean | plastid | 48.08 | 42.56 |
| KRH11434 | Soybean | plastid | 48.38 | 42.2 |
| CDY49799 | Canola | mitochondrion | 44.94 | 42.12 |
| Os04t0624600-01 | Rice | plastid | 50.05 | 41.86 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 44.54 | 41.41 |
| CDY31209 | Canola | plastid | 43.56 | 41.32 |
| CDX97980 | Canola | plastid | 44.05 | 41.06 |
| KXG27148 | Sorghum | mitochondrion, plastid | 48.08 | 41.06 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 49.46 | 40.89 |
| Zm00001d026337_P013 | Maize | plastid | 47.39 | 40.47 |
| Zm00001d002256_P012 | Maize | plastid | 47.1 | 40.32 |
| TraesCS2B01G491700.2 | Wheat | plastid | 50.15 | 39.97 |
| TraesCS2A01G468800.1 | Wheat | plastid | 50.34 | 39.17 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 50.25 | 38.45 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 49.66 | 35.99 |
| Bra016818.1-P | Field mustard | cytosol | 43.85 | 33.97 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 50.84 | 33.84 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 15.93 | 32.34 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 46.41 | 29.63 |
| Zm00001d000002_P002 | Maize | plastid | 48.38 | 29.34 |
| TraesCS1B01G119300.1 | Wheat | plastid | 46.41 | 29.32 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 46.41 | 29.26 |
| TraesCS1A01G091500.1 | Wheat | plastid | 46.61 | 29.1 |
| KXG24650 | Sorghum | plastid | 48.18 | 29.1 |
| Os08t0191433-01 | Rice | plastid | 44.25 | 28.98 |
| GSMUA_Achr1P24640_001 | Banana | cytosol | 4.03 | 20.71 |
| GSMUA_Achr3P16340_001 | Banana | plastid | 13.27 | 18.42 |
| GSMUA_Achr1P16610_001 | Banana | plastid | 5.41 | 18.03 |
| GSMUA_Achr8P27560_001 | Banana | plastid | 13.37 | 14.47 |
| GSMUA_Achr4P10220_001 | Banana | plastid | 8.55 | 11.18 |
| GSMUA_Achr1P08190_001 | Banana | cytosol, plastid | 6.69 | 11.04 |
| GSMUA_Achr1P06140_001 | Banana | plastid | 6.39 | 10.55 |
| GSMUA_Achr9P20780_001 | Banana | plastid | 6.1 | 10.1 |
| GSMUA_Achr3P03290_001 | Banana | plastid | 6.78 | 9.99 |
| GSMUA_Achr1P24650_001 | Banana | mitochondrion | 7.47 | 9.64 |
| GSMUA_Achr6P23190_001 | Banana | cytosol | 6.69 | 9.34 |
| GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 0.29 | 1.36 |
| GSMUA_Achr8P24090_001 | Banana | cytosol | 0.29 | 1.0 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 0.2 | 0.86 |
| GSMUA_Achr1P16620_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P18570_001 | EnsemblPlants:GSMUA_Achr11T18570_001 | EnsemblPlantsGene:GSMUA_Achr11G18570_001 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | GO:GO:2001070 | InterPro:CBM25 | InterPro:Starch_synth_cat_dom | KEGG:00500+2.4.1.21 | ncoils:Coil |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 | PFAM:PF08323 | PFAM:PF16760 | SEG:seg | SMART:SM01066 |
| SUPFAM:SSF53756 | UniParc:UPI0002967A2F | UniProt:M0RTD7 | MapMan:3.2.2.4.3 | : | : |
Description
Soluble starch synthase 3, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G18570_001]
Coordinates
chr11:-:19921581..19937452
Molecular Weight (calculated)
114493.0 Da
IEP (calculated)
5.801
GRAVY (calculated)
-0.512
Length
1017 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLQPQRPIC CPRAVPEHTR FRIRPVHGLF SHSTLGFREV TRIGTTPCML ASSGQWFLCH LKSRTSLSMC NLHVFELHSA GRRPRRTLTP GTKASTRKGF
0101: APRPQVGTST QKKDQNDAQE EEVSGSSGSK QPAISSSGTT DRKVTGDAQS AEIVPTSRMS SNLVKRRIDI LEEAEQQGQG NDETDQQIFT DMPSDSTDFA
0201: ETDGQIADVG IEGDGLGLRY KNIAVDHSNK GIGKETMIDQ FTEAGIGKEI TTERFSKVGV GKDTVTDQFN DVGIRKETMT DEFSDAGIGE ETMADQFSEV
0301: GKQMIYVKNQ IGRITIAEMT EIAGEEEKKL AVVESSLDIS DVEELAEAHD STENAVLDME ESLLKQKADM EAKAQRQLLE NLADENFSEG IKVFVVPQVV
0401: NPDQVIEIFF NRSLSALANE PDVLIKGAYN GWRWQFFTEK LQKTDLKGDW WSCRLSVPKE AYKVDFVFFN GADAYENNNS KDFSLPVEGG MDETAFEDLL
0501: LEEKHREIEK LAAEQAEKER QAEEHRQKAA EKAASEADKA QAKIEAEKRR HHLHHLMKLA SESASHIWQI EPNFFEGGDR VRLYYNRSSR PLAHATEIWI
0601: HGGHNIWSEG LSIIEKLSHS EKRDGDWWSA DVVVPDRALV LDWVFADGPP GKAVVYDNNN RQDFHATVPK SMPGELFWVE EEHRIYRKLQ EERRAREEAV
0701: HKKAEKTARM KAETKEKTMK MFLLSQKHIV YTEPIDVRAG SVITVLYNPS NTVLNGKPEV WFRCSFNRWS HHNGPLPPQK MVPAENASHL KATVKVPMDA
0801: YMMDFVFSER EDGGIYDNRN GMDYHIPVIG GIAKEPPMHI VHIAVEMAPI AKVGGLGDVV TSLSRAVQDL GHTVDVVLPK YNCMNLSNVK DLHFRNSFAW
0901: DGMEINVWFG QVEGLPVYFL EPQNGMFSVG CIYGRNDDGH RFGFFCHAAL EFLLQSGFQP DILHCHDWSS APVAWLFKEH YAHYGLSNAR VIFTIHNLEF
1001: GVHNIGRAMA YADKATT
0101: APRPQVGTST QKKDQNDAQE EEVSGSSGSK QPAISSSGTT DRKVTGDAQS AEIVPTSRMS SNLVKRRIDI LEEAEQQGQG NDETDQQIFT DMPSDSTDFA
0201: ETDGQIADVG IEGDGLGLRY KNIAVDHSNK GIGKETMIDQ FTEAGIGKEI TTERFSKVGV GKDTVTDQFN DVGIRKETMT DEFSDAGIGE ETMADQFSEV
0301: GKQMIYVKNQ IGRITIAEMT EIAGEEEKKL AVVESSLDIS DVEELAEAHD STENAVLDME ESLLKQKADM EAKAQRQLLE NLADENFSEG IKVFVVPQVV
0401: NPDQVIEIFF NRSLSALANE PDVLIKGAYN GWRWQFFTEK LQKTDLKGDW WSCRLSVPKE AYKVDFVFFN GADAYENNNS KDFSLPVEGG MDETAFEDLL
0501: LEEKHREIEK LAAEQAEKER QAEEHRQKAA EKAASEADKA QAKIEAEKRR HHLHHLMKLA SESASHIWQI EPNFFEGGDR VRLYYNRSSR PLAHATEIWI
0601: HGGHNIWSEG LSIIEKLSHS EKRDGDWWSA DVVVPDRALV LDWVFADGPP GKAVVYDNNN RQDFHATVPK SMPGELFWVE EEHRIYRKLQ EERRAREEAV
0701: HKKAEKTARM KAETKEKTMK MFLLSQKHIV YTEPIDVRAG SVITVLYNPS NTVLNGKPEV WFRCSFNRWS HHNGPLPPQK MVPAENASHL KATVKVPMDA
0801: YMMDFVFSER EDGGIYDNRN GMDYHIPVIG GIAKEPPMHI VHIAVEMAPI AKVGGLGDVV TSLSRAVQDL GHTVDVVLPK YNCMNLSNVK DLHFRNSFAW
0901: DGMEINVWFG QVEGLPVYFL EPQNGMFSVG CIYGRNDDGH RFGFFCHAAL EFLLQSGFQP DILHCHDWSS APVAWLFKEH YAHYGLSNAR VIFTIHNLEF
1001: GVHNIGRAMA YADKATT
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.