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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 12.5 81.97
Bra019836.1-P Field mustard endoplasmic reticulum, vacuole 26.51 80.84
AT1G11720.2 Thale cress mitochondrion, plastid 49.54 69.2
KRH20852 Soybean plastid 51.9 69.02
KRH51091 Soybean plastid 48.82 68.95
CDY49799 Canola mitochondrion 48.95 68.94
CDY31209 Canola plastid 48.36 68.94
CDX97980 Canola plastid 48.95 68.56
KRH11434 Soybean plastid 51.37 67.32
Solyc02g080570.2.1 Tomato nucleus, plastid 52.55 65.28
GSMUA_Achr5P00700_001 Banana plastid 46.2 63.04
Zm00001d002256_P012 Maize plastid 44.76 57.58
Zm00001d026337_P013 Maize plastid 44.57 57.18
KXG27148 Sorghum mitochondrion, plastid 44.5 57.09
Os04t0624600-01 Rice plastid 45.42 57.07
Bra016818.1-P Field mustard cytosol 48.49 56.44
TraesCS2B01G491700.2 Wheat plastid 45.42 54.39
TraesCS2A01G468800.1 Wheat plastid 45.75 53.48
HORVU2Hr1G106410.9 Barley cytosol 45.16 51.92
GSMUA_Achr11P... Banana plastid 33.84 50.84
TraesCS2D01G468900.2 Wheat endoplasmic reticulum, golgi 45.29 49.32
HORVU1Hr1G021590.5 Barley mitochondrion 42.87 41.12
Os08t0191433-01 Rice plastid 41.62 40.95
TraesCS1B01G119300.1 Wheat plastid 42.93 40.75
TraesCS1D01G100100.1 Wheat cytosol 42.87 40.61
TraesCS1A01G091500.1 Wheat plastid 43.13 40.45
Zm00001d000002_P002 Maize plastid 43.26 39.42
KXG24650 Sorghum plastid 43.32 39.31
VIT_11s0065g00150.t01 Wine grape plastid 13.35 33.72
VIT_10s0003g02880.t01 Wine grape plastid 19.24 29.08
VIT_07s0205g00090.t01 Wine grape plastid 3.99 27.85
VIT_16s0098g01780.t01 Wine grape plastid 10.67 25.75
VIT_15s0048g02600.t01 Wine grape plastid 10.08 25.08
VIT_02s0025g02790.t01 Wine grape plastid 9.82 24.79
VIT_14s0108g00940.t01 Wine grape plastid 11.65 22.25
VIT_07s0205g00110.t01 Wine grape cytosol, nucleus 6.48 20.37
Protein Annotations
KEGG:00500+2.4.1.21Gene3D:2.60.40.10MapMan:3.2.2.4.3Gene3D:3.40.50.2000InterPro:CBM25ProteinID:CCB48215
ProteinID:CCB48215.1ncoils:CoilUniProt:F6H7M0EMBL:FN595248GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0003824GO:GO:0004373GO:GO:0004518GO:GO:0004519
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0005975GO:GO:0006139GO:GO:0006259GO:GO:0006281GO:GO:0006355GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009011GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009987GO:GO:0015074GO:GO:0016602GO:GO:0016740GO:GO:0016787
GO:GO:0019252GO:GO:0030246GO:GO:0090305GO:GO:2001070InterPro:GS/SSInterPro:Glyco_trans_1
InterPro:IPR013783InterPro:Ig-like_foldHAMAP:MF_00484PFAM:PF00534PFAM:PF08323PFAM:PF16760
PANTHER:PTHR12526PANTHER:PTHR12526:SF341SMART:SM01066SUPFAM:SSF53756InterPro:Starch_synth_cat_domUniParc:UPI0002108D26
ArrayExpress:VIT_10s0116g01730EnsemblPlantsGene:VIT_10s0116g01730EnsemblPlants:VIT_10s0116g01730.t01RefSeq:XP_003635581RefSeq:XP_003635581.1SEG:seg
Description
No Description!
Coordinates
chr10:-:977373..999028
Molecular Weight (calculated)
173236.0 Da
IEP (calculated)
6.482
GRAVY (calculated)
-0.537
Length
1528 amino acids
Sequence
(BLAST)
0001: MEVALQAQRP VSCRALSDRE ANFKIKPFLG FFPNGRATQS SQHSWRREFP LSGVSNGIVA SADFSRRRQR KVSMSGPRGP GPKGFLPKTP VETSTQKRDQ
0101: RNTGKNEDPS TPTSSEYVGT GKKTLGTDEE QTVEITRGTE VDEERNDKGS SAPTSSEYES GKKTLETTVV AGEKQTVEIT QGKKVEGGDD NGKVAGADEN
0201: VIESQKIKPT AKSDTGHAKD GISLEEKNSG IIKSSANEGN ESIKFDGVRA EDVSLDLKLE MEANLHKQVL EELAEENFSR GNKMFYYPQV VKPDQDIEVF
0301: LNRSVSTLSN EPDVMIMGAF NDWRWKSFTI QLNKTHLQGD WWSCQVHIPK EAYKMDFVFF NGTNVYDNNN QKDFCIPVHG GMDALAFEDI LLEEKRRELE
0401: KLAKEQAERE RQAEEQRRIE AEKAAREADR AQARAETERR REMLQHLMKK GAVSVDNVWC IEPREFKGDD LVRLYYNRSS GPLAHANDIW IHGGHNNWKD
0501: GLSIVGSLIK DEKKEGDWWY VEVVVPERAL VLDWVFADGP PQRASLYDNN HREDFHAIVP QSISEELYWV EEEYQIYKKL QEERWLREEA IRAKVERTAR
0601: MKAEAKERTL KMFLLSQKHI VYTEPLDVQA GSTVSVLYNP ANTVLNGKSE VWFRCSFNRW THRNGSLPPQ KMLPVDNGSH LKATEQTVTQ YYNTLTRYWQ
0701: HLDLFETHSW KSSSDLPLKV FGCTAFVHVY SQNRSKFAPR ANKCIFLGYS PTQKGYKCYS PTNKRFYTTM DVSFFEHVFF YPKSHVQGES MNEHQVWESL
0801: LEGVPSFHSE SPNPSQFAPT ELSTPMPSSV QPAQHTNVPS PVTIQSPMPI QPIAPQLANE NLQVYIRRRK RQELEHGSQS TCGQYIDSNS SLPEENIGED
0901: RVGEVLIPSI DDSTLLIALR KGVRRCTDHP IGNYVTYEGL SPSYRAFATS LDDTQVPNTI QEALKISEWK KAVQDEIDAL EKNGTWTITD LPVGKRPVGF
1001: KVPLDAYMMD FVFSEREDGG IFDNRNGMDY HIPVFGSVVK EPPMHIVHIA VEMAPIAKVG GLGDVVTSLS RAVQELNHHV DIILPKYDCL NLSNVGGLGD
1101: VVTSLSRAVQ ELNHHVDIIL PKYDCLNLSN VKDFQYKRCY FWGGTEIKVW FGKVEGLSVY FLEPQNGFFS AGCIYGCRND GERFGFFCHA ALEFLLQSGF
1201: HPDIIHCHDW SSAPVSWLFK DHYKHYGLSK ARVVFTIHNL EFGAPLIAKA MVYTDKATTV SHTYSREVSG NPAIAPHLYK FHGILNGIDL DIWDPYNDKF
1301: IPVPYISDNV VEGKRAAKEA LQQRLGLKKS DFPLVGIITR LTHQKGIHLI KHAIWRTLER NGQVVLLGSA PDPRIQNDFV NLANQLHSSH GDRARLCLTY
1401: DEPLSHLIYA GADFILVPSI FEPCGLTQLT AMRYGSIPVV RKTGGLYDTV FDVDHDKERA QAQGLEPNGF NFDGADPVGV DYALNRAISA WYDGRDWFNS
1501: LCKRVMEQDW SWNRPALDYM ELYHAARK
Best Arabidopsis Sequence Match ( AT1G11720.2 )
(BLAST)
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.