Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G491700.2 | Wheat | plastid | 86.46 | 95.06 |
| TraesCS2A01G468800.1 | Wheat | plastid | 87.95 | 94.41 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 82.68 | 87.28 |
| Os04t0624600-01 | Rice | plastid | 68.71 | 79.28 |
| KXG27148 | Sorghum | mitochondrion, plastid | 64.79 | 76.32 |
| Zm00001d026337_P013 | Maize | plastid | 64.01 | 75.4 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 12.47 | 75.11 |
| Zm00001d002256_P012 | Maize | plastid | 63.51 | 75.0 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 25.45 | 71.26 |
| KRH51091 | Soybean | plastid | 45.4 | 58.87 |
| CDY49799 | Canola | mitochondrion | 45.33 | 58.62 |
| CDY31209 | Canola | plastid | 44.76 | 58.58 |
| CDX97980 | Canola | plastid | 45.47 | 58.48 |
| KRH20852 | Soybean | plastid | 47.61 | 58.14 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 46.33 | 58.04 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 45.19 | 57.95 |
| KRH11434 | Soybean | plastid | 47.83 | 57.55 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 47.04 | 53.66 |
| GSMUA_Achr11P... | Banana | plastid | 35.99 | 49.66 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 56.52 | 49.16 |
| Bra016818.1-P | Field mustard | cytosol | 45.05 | 48.13 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 49.32 | 45.29 |
| TraesCS1D01G356900.1 | Wheat | plastid | 18.6 | 28.59 |
| TraesCS7D01G064300.1 | Wheat | plastid | 10.98 | 25.5 |
| TraesCS2D01G369800.1 | Wheat | plastid | 10.76 | 25.21 |
| TraesCS6D01G287000.1 | Wheat | plastid | 11.9 | 25.19 |
| TraesCS1D01G138100.2 | Wheat | plastid | 12.62 | 23.57 |
| TraesCS7D01G117800.1 | Wheat | plastid | 10.83 | 23.21 |
| TraesCS7D01G190100.1 | Wheat | plastid | 12.19 | 21.4 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS2D01G468900 |
| EnsemblPlants:TraesCS2D01G468900.2 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:574104449..574113211
Molecular Weight (calculated)
158385.0 Da
IEP (calculated)
4.710
GRAVY (calculated)
-0.565
Length
1403 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYVLFRSPFL LVCIFLFRSL HSYWWARLCG AARPRKEYLT AELLTFRCFP QVHLACNPLV APGRRITRGS RTGLGPRDEN KGESSELTSN SDTFTPGTLY
0101: GMRTKSIVKC SRFTRRRLVR CMVASSDYPK RNPRRSSAPK PKGTASRGYA PRPSAESWTS TKKTEHSSAD EDGDLGTSNG TLSSETTEQT SIAEEEYEVE
0201: FSGNVSSSME LKGVNEVETE EEADQKQPPA LASTSMDVES TSIADESSEV DFSGNVSSSV ELKGVNEVET EEEADQKQPP ALASTSMDVD SVNEATEQTS
0301: TADESSEVDF SGNVSSSVVL EVVDESETEE EADQKQSSAL ASTSMDVESI DRELEEYRVR ISALVGFSTQ GQDQSIIGVH EQDKLVITSD EQDISAVDVP
0401: EESQSVVGVT REDTTEQTTS EQDITEAVVE EIASKNLVAR KHSSSEDGVG ASKDANEEPL VAGDELRVTE DEEQHEPEMQ EQVPMDVDPQ ALKRRLAELA
0501: DKNYSIGNKC FVFPELVEAD SVIDLYLNRS MSALASEPDI LIKGAFNGWR WNHFTEKLHR SELIGDWWCC KLYIPKQAYR LDFVFFNGDT VYENNSYNDF
0601: VLHIESDIDE YSFEDFLLEE KQRELERLAA EEAERERQVE EERRKEEERA AMEADRAQSK AEVEMMRNKL QHVLGLASRY ADNLWYIEPS TYKGGDRVRL
0701: YYNRSSRPLN NKNEIWLHGG YNNWTDGPSI VERLVKSEEK DGDWWYANVT LPESALVLDW VFADGSPGNA SKYDNNGKRD FHAAVSKSIS DDLFWVEEER
0801: RIFERLQRER KEKEDAGRRK AEITARMKAE MKEKTMREFL LSQKHIVYTE PLEVRAGTTV DVLYNPSNTV LNGSPEVWFR CSFNRWTHPS GPLPPQKMVN
0901: EVNGSHLQAT VRVPLDAYMM DFVFSESEEG GIYDNRDGMD YHIPVSDSTA KEPPMHIVHI AVEMAPIAKV GGLGDVVTSL SRAIQDLGHK VEVIFPKYDC
1001: LNLSNVKDLH CRQSFTWGGT EIKVWFGKVE GISVYFLEPQ NGMFWVGCVY GKNDESRFGF FCHSALEFLL QSGSSPDIIH CHDWSSAPVA WLYKQQYVHN
1101: GLPNGRVVFT IHNLEFGVHH IGKAMAHCDK ATTVSYTYSK EVSGHGSIAP HYFKFHGIRN GIDSDIWDPY NDNFIPVHYT SENVVEGKSS AKRALQEKLG
1201: LHQTDSPLVG IISRLTAQKG IHLIKHAIYR TLERNGQVVL LGSAPDHRIQ GDFSNLAAKL HGEFDGRVKL CLTYDEPLSH LIYAGADFIL VPSIFEPCGL
1301: TQLTAMRYGS IPIVRKTGGL YDTVFDVDDD KDRAREQGLE PNGFSFEGAD SNGVDYALDR AITTWYDARD WFHSLCKRVM EQDWSWNRPA LDYMELYHST
1401: RKN
0101: GMRTKSIVKC SRFTRRRLVR CMVASSDYPK RNPRRSSAPK PKGTASRGYA PRPSAESWTS TKKTEHSSAD EDGDLGTSNG TLSSETTEQT SIAEEEYEVE
0201: FSGNVSSSME LKGVNEVETE EEADQKQPPA LASTSMDVES TSIADESSEV DFSGNVSSSV ELKGVNEVET EEEADQKQPP ALASTSMDVD SVNEATEQTS
0301: TADESSEVDF SGNVSSSVVL EVVDESETEE EADQKQSSAL ASTSMDVESI DRELEEYRVR ISALVGFSTQ GQDQSIIGVH EQDKLVITSD EQDISAVDVP
0401: EESQSVVGVT REDTTEQTTS EQDITEAVVE EIASKNLVAR KHSSSEDGVG ASKDANEEPL VAGDELRVTE DEEQHEPEMQ EQVPMDVDPQ ALKRRLAELA
0501: DKNYSIGNKC FVFPELVEAD SVIDLYLNRS MSALASEPDI LIKGAFNGWR WNHFTEKLHR SELIGDWWCC KLYIPKQAYR LDFVFFNGDT VYENNSYNDF
0601: VLHIESDIDE YSFEDFLLEE KQRELERLAA EEAERERQVE EERRKEEERA AMEADRAQSK AEVEMMRNKL QHVLGLASRY ADNLWYIEPS TYKGGDRVRL
0701: YYNRSSRPLN NKNEIWLHGG YNNWTDGPSI VERLVKSEEK DGDWWYANVT LPESALVLDW VFADGSPGNA SKYDNNGKRD FHAAVSKSIS DDLFWVEEER
0801: RIFERLQRER KEKEDAGRRK AEITARMKAE MKEKTMREFL LSQKHIVYTE PLEVRAGTTV DVLYNPSNTV LNGSPEVWFR CSFNRWTHPS GPLPPQKMVN
0901: EVNGSHLQAT VRVPLDAYMM DFVFSESEEG GIYDNRDGMD YHIPVSDSTA KEPPMHIVHI AVEMAPIAKV GGLGDVVTSL SRAIQDLGHK VEVIFPKYDC
1001: LNLSNVKDLH CRQSFTWGGT EIKVWFGKVE GISVYFLEPQ NGMFWVGCVY GKNDESRFGF FCHSALEFLL QSGSSPDIIH CHDWSSAPVA WLYKQQYVHN
1101: GLPNGRVVFT IHNLEFGVHH IGKAMAHCDK ATTVSYTYSK EVSGHGSIAP HYFKFHGIRN GIDSDIWDPY NDNFIPVHYT SENVVEGKSS AKRALQEKLG
1201: LHQTDSPLVG IISRLTAQKG IHLIKHAIYR TLERNGQVVL LGSAPDHRIQ GDFSNLAAKL HGEFDGRVKL CLTYDEPLSH LIYAGADFIL VPSIFEPCGL
1301: TQLTAMRYGS IPIVRKTGGL YDTVFDVDDD KDRAREQGLE PNGFSFEGAD SNGVDYALDR AITTWYDARD WFHSLCKRVM EQDWSWNRPA LDYMELYHST
1401: RKN
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.