Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31209 | Canola | plastid | 77.38 | 94.78 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 36.1 | 94.61 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 71.67 | 86.01 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 14.09 | 79.4 |
| KRH51091 | Soybean | plastid | 51.49 | 62.48 |
| KRH20852 | Soybean | plastid | 54.15 | 61.88 |
| KRH11434 | Soybean | plastid | 54.23 | 61.06 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 55.83 | 59.59 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 47.3 | 55.45 |
| KXG27148 | Sorghum | mitochondrion, plastid | 47.98 | 52.9 |
| Os04t0624600-01 | Rice | plastid | 48.9 | 52.8 |
| Zm00001d002256_P012 | Maize | plastid | 47.45 | 52.44 |
| Zm00001d026337_P013 | Maize | plastid | 47.14 | 51.97 |
| TraesCS2B01G491700.2 | Wheat | plastid | 47.98 | 49.37 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 49.51 | 48.91 |
| TraesCS2A01G468800.1 | Wheat | plastid | 48.36 | 48.58 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 56.44 | 48.49 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 48.13 | 45.05 |
| GSMUA_Achr11P... | Banana | plastid | 33.97 | 43.85 |
| Os08t0191433-01 | Rice | plastid | 45.24 | 38.25 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 44.94 | 37.04 |
| TraesCS1B01G119300.1 | Wheat | plastid | 45.32 | 36.96 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 45.16 | 36.76 |
| TraesCS1A01G091500.1 | Wheat | plastid | 45.16 | 36.4 |
| Zm00001d000002_P002 | Maize | plastid | 46.23 | 36.2 |
| KXG24650 | Sorghum | plastid | 46.38 | 36.16 |
| Bra021017.1-P | Field mustard | plastid | 21.78 | 28.04 |
| Bra009747.1-P | Field mustard | plastid | 12.26 | 24.73 |
| Bra039138.1-P | Field mustard | plastid | 13.33 | 22.7 |
| Bra010189.1-P | Field mustard | nucleus | 12.11 | 21.72 |
| Bra021486.1-P | Field mustard | endoplasmic reticulum | 3.35 | 20.85 |
| Bra024412.1-P | Field mustard | plastid | 8.53 | 18.89 |
| Bra021487.1-P | Field mustard | cytosol | 4.65 | 16.44 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | EnsemblPlantsGene:Bra016818 | EnsemblPlants:Bra016818.1 | EnsemblPlants:Bra016818.1-P |
| InterPro:CBM25 | ncoils:Coil | InterPro:Cystatin-related_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 | InterPro:GS/SS | UniProt:M4DJZ0 |
| HAMAP:MF_00484 | PFAM:PF08323 | PFAM:PF16760 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 | SMART:SM01066 |
| SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | TIGRFAMs:TIGR01638 | UniParc:UPI00025463F8 | SEG:seg | : |
Description
AT1G11720 (E=0.0) ATSS3 | ATSS3 (starch synthase 3); starch synthase/ transferase, transferring glycosyl groups
Coordinates
chrA08:-:20104447..20111172
Molecular Weight (calculated)
149326.0 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.509
Length
1313 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVVDAAKRAP TRDSLAEEEQ SSSPMKKQKV EEEEKIYSET HVPELGCKPQ WDVDSYDGRE YESDPEDRKL FSDDEEYDKY RRERRRAFDS KGFIYEPLSG
0101: NYPIKDLEAL VYPNVTSREL MTDLANLCVK KLNETEKKTV ELVEIVRVIV LGGGTRKAYI TFMARESLNG PLIEYQAKVV TYAKNLKPPV PILCRPSPIP
0201: SVYLHQDIKP TESFGGSSLK SKWRKTSYLV RTRGPFDDSN QRPVFGKEDP LRLDVVIQTP TSLRPGFQQK GRLKINTFIG FLPRPISSLA SLESQYNSNG
0301: FLHQITASAD FSRKKQGRMA ASGPKSSAPR GFGRRTTVGS AQKRTQKKND EKDSNATSTV TNEGLGVSNL PEAKADVQKQ ALAEDDVLLE QKLKVERESL
0401: RRKEIEALAE EALAKGDRMF VYPLVAKPDE DIEVFLNKTL STLSSEPDVL IMGAFNDWRW KSFTRRLEKT EELHGDWRSC LLHIPKEAYK MDFVFFNGQS
0501: AYDNNDSKDF CVDVKGGMDK VEFENFLLEE KWREQEKLAK EEAERERQEE EKRRIEARKA AIEADREQAK VETQKRREML QPALQKAVVS DENVCYIEPK
0601: DFKGGDEVKI FYNKSSGPLG YAKEVWIHGG FNNWIDGLSI VEKLKADSKS EDWWFAEVIV PVGALVIDWV FADGPPKEAF LYDNNSLQDF HALVPLRTPE
0701: ELYWSEEESL IFRKLQEERR LKEEAMRVKM EKTARLKAET KERTLKKFLL SQKDVVYTEP LEIQAGRPVT VFYNPSNTVL NGKPEVWFRG SFNRWTHRLG
0801: PLPPQKMEAA DDGSSHVKTS AKVPLDAYMM DFVFSEKEDG GVFDNRYGLD YHLPVVGGIA KEPPLHIVHI AVEMAPIAKV GGLGDVVTSL SRAVQELNHN
0901: VDIIFPKYDC IKYNLVKDLQ FNRSYHWGDT EIKVWHGKVE GVSVYFLDPQ NGLFQRGCVY GCADDAGRFG FFCHAALEFL LQGGFHPDIL HCHDWSSAPV
1001: SWLFKDLYTH YGLIKTRVVF TIHNLEFGAG AIGKAMTFSD KATTVSRTYA KEVAGNSVIS PHLYKFHGIV NGIDPDIWDP YNDNFIPVPY TSENVVEGKR
1101: AAKEELQNRL GIKSADLPLV GIITRLTHQK GIHLIKHAIW RTLERNGQVV LLGSAPDPRI QNDFVNLANQ LHSTHGDRAR LVLTYDEPLS HLIYAGADFI
1201: LVPSIFEPCG LTQLIAMRYG AVPVVRKTGG LYDTVFDVDH DKERAQAQVL EPNGFSFDGA DAPGVDYALN RAISAWYDGR EWFNSLCKTV MEQDWSWNRP
1301: ALEYIELYHS ARK
0101: NYPIKDLEAL VYPNVTSREL MTDLANLCVK KLNETEKKTV ELVEIVRVIV LGGGTRKAYI TFMARESLNG PLIEYQAKVV TYAKNLKPPV PILCRPSPIP
0201: SVYLHQDIKP TESFGGSSLK SKWRKTSYLV RTRGPFDDSN QRPVFGKEDP LRLDVVIQTP TSLRPGFQQK GRLKINTFIG FLPRPISSLA SLESQYNSNG
0301: FLHQITASAD FSRKKQGRMA ASGPKSSAPR GFGRRTTVGS AQKRTQKKND EKDSNATSTV TNEGLGVSNL PEAKADVQKQ ALAEDDVLLE QKLKVERESL
0401: RRKEIEALAE EALAKGDRMF VYPLVAKPDE DIEVFLNKTL STLSSEPDVL IMGAFNDWRW KSFTRRLEKT EELHGDWRSC LLHIPKEAYK MDFVFFNGQS
0501: AYDNNDSKDF CVDVKGGMDK VEFENFLLEE KWREQEKLAK EEAERERQEE EKRRIEARKA AIEADREQAK VETQKRREML QPALQKAVVS DENVCYIEPK
0601: DFKGGDEVKI FYNKSSGPLG YAKEVWIHGG FNNWIDGLSI VEKLKADSKS EDWWFAEVIV PVGALVIDWV FADGPPKEAF LYDNNSLQDF HALVPLRTPE
0701: ELYWSEEESL IFRKLQEERR LKEEAMRVKM EKTARLKAET KERTLKKFLL SQKDVVYTEP LEIQAGRPVT VFYNPSNTVL NGKPEVWFRG SFNRWTHRLG
0801: PLPPQKMEAA DDGSSHVKTS AKVPLDAYMM DFVFSEKEDG GVFDNRYGLD YHLPVVGGIA KEPPLHIVHI AVEMAPIAKV GGLGDVVTSL SRAVQELNHN
0901: VDIIFPKYDC IKYNLVKDLQ FNRSYHWGDT EIKVWHGKVE GVSVYFLDPQ NGLFQRGCVY GCADDAGRFG FFCHAALEFL LQGGFHPDIL HCHDWSSAPV
1001: SWLFKDLYTH YGLIKTRVVF TIHNLEFGAG AIGKAMTFSD KATTVSRTYA KEVAGNSVIS PHLYKFHGIV NGIDPDIWDP YNDNFIPVPY TSENVVEGKR
1101: AAKEELQNRL GIKSADLPLV GIITRLTHQK GIHLIKHAIW RTLERNGQVV LLGSAPDPRI QNDFVNLANQ LHSTHGDRAR LVLTYDEPLS HLIYAGADFI
1201: LVPSIFEPCG LTQLIAMRYG AVPVVRKTGG LYDTVFDVDH DKERAQAQVL EPNGFSFDGA DAPGVDYALN RAISAWYDGR EWFNSLCKTV MEQDWSWNRP
1301: ALEYIELYHS ARK
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.