Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G100100.1 | Wheat | cytosol | 95.4 | 96.34 |
| TraesCS1B01G119300.1 | Wheat | plastid | 94.48 | 95.59 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 88.77 | 90.77 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 10.8 | 75.54 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 20.99 | 68.26 |
| TraesCS2A01G468800.1 | Wheat | plastid | 49.17 | 61.29 |
| Os08t0191433-01 | Rice | plastid | 55.19 | 57.89 |
| KRH51091 | Soybean | plastid | 37.38 | 56.28 |
| CDY49799 | Canola | mitochondrion | 37.32 | 56.04 |
| KXG24650 | Sorghum | plastid | 57.83 | 55.94 |
| CDX97980 | Canola | plastid | 37.26 | 55.64 |
| KRH20852 | Soybean | plastid | 39.23 | 55.61 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 37.32 | 55.58 |
| CDY31209 | Canola | plastid | 36.46 | 55.41 |
| Zm00001d000002_P002 | Maize | plastid | 57.03 | 55.4 |
| KRH11434 | Soybean | plastid | 39.04 | 54.55 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 37.26 | 54.2 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 39.66 | 52.52 |
| GSMUA_Achr11P... | Banana | plastid | 29.1 | 46.61 |
| Bra016818.1-P | Field mustard | cytosol | 36.4 | 45.16 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 40.45 | 43.13 |
| TraesCS1A01G353300.1 | Wheat | cytosol | 13.81 | 32.8 |
| TraesCS2A01G373600.1 | Wheat | plastid | 9.09 | 24.71 |
| TraesCS6A01G307800.1 | Wheat | plastid | 10.25 | 24.7 |
| TraesCS7A01G070100.1 | Wheat | plastid | 8.9 | 24.01 |
| TraesCS4A01G418200.1 | Wheat | plastid | 8.72 | 23.47 |
| TraesCS7A01G120300.1 | Wheat | plastid | 8.96 | 22.67 |
| TraesCS1A01G137200.1 | Wheat | plastid | 10.13 | 21.97 |
| TraesCS7A01G189000.1 | Wheat | plastid | 10.25 | 20.98 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS1A01G091500 |
| EnsemblPlants:TraesCS1A01G091500.1 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1A:+:84002707..84014259
Molecular Weight (calculated)
183067.0 Da
IEP (calculated)
4.687
GRAVY (calculated)
-0.473
Length
1629 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMALRPRGS LCPRSTQPLV VVRPAGRGGG LAQPFLMNGR FTRSRTLRCM VASSDPPNRK SRKMVSPQVK VISSRGYTTR LIVEPSTENI EHNNRDEETL
0101: DTYNALSSTE TAEWTDTREA ETAKADSSQN ALSSSIIGGV DVADEDILAA DLTVNSLSSI TKKEVDAADK ARVKEDAFEL DLPATTLRSV IVDVMDHNGT
0201: VQETLRSVIV DVMDHNGTVQ ETLRSVIVDV MDDAADKARV EEDVFELDLS GNISSSATTV ELDAVDEVGP VQDRFEATSS GNVSNSATVR EVDTSDEAGN
0301: DQGIFRADLS GNVFSSSTTV EVGAVDEAGS IKDRFETDSS GNVSTSAPMW DAIDETVADQ DTFEADLLGN ASSCATYREV DDVVDETRSE EETFVMDLFA
0401: SESGHEKHMA VDYVGEATDE EETYQQQYPV PSSFSMWNKA IAKTGVSLNP ELRLVRVEEQ GKVNFSDKKD LSIDDLPRQN QSIIGSYKQD KSIADVAGPT
0501: QSIFGSSKQH RSIVAFPKQN QSTVSVPEQK QSIVGFHSQD LSAVSLPKQN VPIVGTSREG QTKQVPVVDR QDALYVNGLE AKEGDHTSEK TDEDALHVKF
0601: NVDNVLRKHQ ADRTQAVERT TWKKVDEEHL YMTEHQKSAA EGQMVVNEDE LSITEIGMGR GDKIQHVLSE EELSWSEDEV QLIEDDGQYE VDETSVSVNV
0701: EQDIQGSPQD VVDPQALRVM LQELAEKNYS MRNKLFVFPE VVKADSVIDL YLNRDLTALA NEPDVVIKGA FNGWKWRLFT ERLHKSDLGG VWWSCKLYIP
0801: KEAYRLDFVF FNGRTVYENN GNNDFCIGIE GTMNEDLFED FLVKEKQREL EKLAMEEAER RTQTEEQRRS KESRAADEAV RAQAKAEIEI KKKKLQSMLS
0901: LARTCVDNLW YIEASTDTSR DTIRLYYNRN SRPLAHSTEI WMHGGYNNWS DGLSIVESFV KCNDRDGDWW YADVIPPEKA LVLDWVFADG PARNARNYDN
1001: NARQDFHAIL PNNNVTEEGF WVQEEQNIYT RLLQERREKE ETMKRKAERS ANIKAEMKAK TMRRFLLSQK HIVYTEPLEI RAGTTVDVLY NPSNTVLNGK
1101: PEVWFRCSFN LWMHPSGALP PQKMVKSGDG PLLKATVNVP PDAYMMDFVF SEWEEDGIYD NRNGMDYHIP VSDSIETENY MRIIHIAVEM APVAKVGGLG
1201: DVVTSLSRAV QDLGHTVEVI LPKYDCLNQS SVKDLHLYQS FSWGGTEIKV WVGRVEDLTV YFLEPQNGMF GVGCVYGRND DRRFGFFCHS ALEFILQNEF
1301: SPHIIHCHDW SSAPVAWLYK EHYSQSRMAS TRVVFTIHNL EFGAHYIGKA MTYCDKATTV SPTYSRDVAG HGAIAPHREK FYGILNGIDP DIWDPYTDNF
1401: IPVPYTCENV VEGKSAAKRA LQQKFGLQQT DVPIVGIITR LTAQKGIHLI KHAIHRTLES NGQVVLLGSA PDHRIQGDFC RLADALHGVY HGRVKLVLTY
1501: DEPLSHLIYA GSDFIIVPSI FEPCGLTQLV AMRYGSIPIV RKTGGLYDTV FDVDNDKDRA RSLGLEPNGF SFDGADSNGV DYALNRAIGA WFDARDWFHS
1601: LCKRVMEQDW SWNRPALDYI ELYHAARKF
0101: DTYNALSSTE TAEWTDTREA ETAKADSSQN ALSSSIIGGV DVADEDILAA DLTVNSLSSI TKKEVDAADK ARVKEDAFEL DLPATTLRSV IVDVMDHNGT
0201: VQETLRSVIV DVMDHNGTVQ ETLRSVIVDV MDDAADKARV EEDVFELDLS GNISSSATTV ELDAVDEVGP VQDRFEATSS GNVSNSATVR EVDTSDEAGN
0301: DQGIFRADLS GNVFSSSTTV EVGAVDEAGS IKDRFETDSS GNVSTSAPMW DAIDETVADQ DTFEADLLGN ASSCATYREV DDVVDETRSE EETFVMDLFA
0401: SESGHEKHMA VDYVGEATDE EETYQQQYPV PSSFSMWNKA IAKTGVSLNP ELRLVRVEEQ GKVNFSDKKD LSIDDLPRQN QSIIGSYKQD KSIADVAGPT
0501: QSIFGSSKQH RSIVAFPKQN QSTVSVPEQK QSIVGFHSQD LSAVSLPKQN VPIVGTSREG QTKQVPVVDR QDALYVNGLE AKEGDHTSEK TDEDALHVKF
0601: NVDNVLRKHQ ADRTQAVERT TWKKVDEEHL YMTEHQKSAA EGQMVVNEDE LSITEIGMGR GDKIQHVLSE EELSWSEDEV QLIEDDGQYE VDETSVSVNV
0701: EQDIQGSPQD VVDPQALRVM LQELAEKNYS MRNKLFVFPE VVKADSVIDL YLNRDLTALA NEPDVVIKGA FNGWKWRLFT ERLHKSDLGG VWWSCKLYIP
0801: KEAYRLDFVF FNGRTVYENN GNNDFCIGIE GTMNEDLFED FLVKEKQREL EKLAMEEAER RTQTEEQRRS KESRAADEAV RAQAKAEIEI KKKKLQSMLS
0901: LARTCVDNLW YIEASTDTSR DTIRLYYNRN SRPLAHSTEI WMHGGYNNWS DGLSIVESFV KCNDRDGDWW YADVIPPEKA LVLDWVFADG PARNARNYDN
1001: NARQDFHAIL PNNNVTEEGF WVQEEQNIYT RLLQERREKE ETMKRKAERS ANIKAEMKAK TMRRFLLSQK HIVYTEPLEI RAGTTVDVLY NPSNTVLNGK
1101: PEVWFRCSFN LWMHPSGALP PQKMVKSGDG PLLKATVNVP PDAYMMDFVF SEWEEDGIYD NRNGMDYHIP VSDSIETENY MRIIHIAVEM APVAKVGGLG
1201: DVVTSLSRAV QDLGHTVEVI LPKYDCLNQS SVKDLHLYQS FSWGGTEIKV WVGRVEDLTV YFLEPQNGMF GVGCVYGRND DRRFGFFCHS ALEFILQNEF
1301: SPHIIHCHDW SSAPVAWLYK EHYSQSRMAS TRVVFTIHNL EFGAHYIGKA MTYCDKATTV SPTYSRDVAG HGAIAPHREK FYGILNGIDP DIWDPYTDNF
1401: IPVPYTCENV VEGKSAAKRA LQQKFGLQQT DVPIVGIITR LTAQKGIHLI KHAIHRTLES NGQVVLLGSA PDHRIQGDFC RLADALHGVY HGRVKLVLTY
1501: DEPLSHLIYA GSDFIIVPSI FEPCGLTQLV AMRYGSIPIV RKTGGLYDTV FDVDNDKDRA RSLGLEPNGF SFDGADSNGV DYALNRAIGA WFDARDWFHS
1601: LCKRVMEQDW SWNRPALDYI ELYHAARKF
0001: MISYFLNQDF SRKKQGRMAA SGPKSSGPRG FGRRTTVGSA QKRTQKKNGE KDSNATSTAT NEVSGISKLP AAKVDVQKQS SVVLNERNVL DRSDIEDGSD
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.