Factsheet for TraesCS2A01G373600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G369800.1	Wheat	plastid	97.83	97.83
TraesCS2B01G390700.1	Wheat	plastid	97.33	97.33
HORVU2Hr1G090980.3	Barley	plastid	95.49	96.46
EER98410	Sorghum	plastid	86.48	85.34
Os07t0412100-01	Rice	plastid	84.81	83.55
Zm00001d019479_P004	Maize	plastid	84.64	80.99
Zm00001d029360_P001	Maize	cytosol	30.72	73.6
Zm00001d033690_P001	Maize	cytosol, plastid	38.9	68.53
VIT_15s0048g02600.t01	Wine grape	plastid	68.11	66.45
Solyc08g083320.2.1	Tomato	plastid	66.28	65.95
PGSC0003DMT400031568	Potato	plastid	66.44	65.57
VIT_02s0025g02790.t01	Wine grape	plastid	65.61	64.96
KRH06370	Soybean	nucleus, plastid	67.11	64.94
KRH47803	Soybean	nucleus	66.94	64.78
KRG92546	Soybean	plastid	64.94	64.3
KRH34245	Soybean	plastid	63.94	62.99
AT1G32900.1	Thale cress	plastid	63.61	62.46
TraesCS4A01G418200.1	Wheat	plastid	59.43	58.84
TraesCS7A01G070100.1	Wheat	plastid	59.27	58.77
CDY71840	Canola	plastid	29.38	58.28
Zm00001d027242_P002	Maize	plastid	51.42	52.56
Bra010189.1-P	Field mustard	nucleus	63.77	52.19
CDX73274	Canola	plastid	31.89	50.0
TraesCS6A01G307800.1	Wheat	plastid	34.22	30.33
TraesCS7A01G120300.1	Wheat	plastid	32.22	29.97
TraesCS1A01G137200.1	Wheat	plastid	35.23	28.1
TraesCS7A01G189000.1	Wheat	plastid	33.72	25.38
TraesCS1A01G353300.1	Wheat	cytosol	26.21	22.89
TraesCS2A01G468800.1	Wheat	plastid	25.38	11.63
TraesCS1A01G091500.1	Wheat	plastid	24.71	9.09

Protein Annotations

EnsemblPlants:TraesCS2A01G373600.1	EnsemblPlantsGene:TraesCS2A01G373600	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004373
GO:GO:0016740	HAMAP:MF_00484	InterPro:GS/SS	InterPro:Glyco_trans_1	InterPro:Starch_synth_cat_dom	KEGG:00500+2.4.1.21
PANTHER:PTHR12526	PANTHER:PTHR12526:SF383	PFAM:PF00534	PFAM:PF08323	SEG:seg	SUPFAM:SSF53756
TIGR:cd03791	TIGRFAMs:TIGR02095	MapMan:3.2.2.4.5	:	:	:

Description

No Description!

Coordinates

chr2A:+:616979816..616982958

Molecular Weight (calculated)

65891.6 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.049

Length

599 amino acids

Sequence
(BLAST)

001: MGSIPTYCSY QTNSVGSLKL SPHIQLQQSC NNGVMLLSMR NKTQLAKRRA TNYGTHRNSS RTPAPIVCST GMPIIFVATE VHPWCKTGGL GDVVGGLPPA
101: LAAMGHRVMT IAPRYDQYKD TWDTNVLVEV IVGDRTETVR FFHCYKRGVD HVFVDHPMFL EKVWGKTGSK LYGPTTGTDF RDNQLRFCLL CLAALEAPRV
201: LNLNNSEYFS GPYGENVVFV ANDWHTAVLP CYLKSMYKQN GIYENAKVAF CIHNIAYQGR FPRADFELLN LPESFVPSFD FVDGHVKPVV GRKINWMKAG
301: ISECDVVLTV SPHYVKELTS GPEKGVELDG VLRAKPLETG IVNGMDVVDW NPATDKYISV KYNATTVAEA RALNKEILQA EVGLPVDSSI PVIVFIGRLE
401: EQKGSDILIA AIPEFVEENV QIIVLGTGKK KMEEELMLLE AEYPQNARGI AKFNVPLAHM MFAGADFIIV PSRFEPCGLI QLQGMRYGVI PICSSTGGLV
501: DTVREGVTGF HMGSFNVEFE TVDPADVAAV ASNVTRALKQ YKTLSFHAMV QNCMAQDLSW KGPAKKWEEA LLGLGVEGSQ PGIEGEEIAP VAKQNVATP

Best Arabidopsis Sequence Match ( AT1G32900.1 )
(BLAST)

001: MATVTASSNF VSRTSLFNNH GASSCSDVAQ ITLKGQSLTH CGLRSFNMVD NLQRRSQAKP VSAKSSKRSS KVKTAGKIVC EKGMSVIFIG AEVGPWSKTG
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP

Arabidopsis Description

GBSS1Granule-bound starch synthase 1, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MAQ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.