Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G091500.1 | Wheat | plastid | 95.59 | 94.48 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 94.6 | 94.42 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 89.88 | 90.83 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 10.87 | 75.11 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 21.18 | 68.06 |
| TraesCS2B01G491700.2 | Wheat | plastid | 49.5 | 62.46 |
| Os08t0191433-01 | Rice | plastid | 55.84 | 57.89 |
| KRH51091 | Soybean | plastid | 37.83 | 56.28 |
| CDY49799 | Canola | mitochondrion | 37.89 | 56.22 |
| CDX97980 | Canola | plastid | 37.89 | 55.91 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 37.95 | 55.85 |
| KXG24650 | Sorghum | plastid | 58.32 | 55.76 |
| KRH20852 | Soybean | plastid | 39.69 | 55.61 |
| CDY31209 | Canola | plastid | 37.02 | 55.6 |
| Zm00001d000002_P002 | Maize | plastid | 57.39 | 55.1 |
| KRH11434 | Soybean | plastid | 39.5 | 54.55 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 37.58 | 54.02 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 39.69 | 51.95 |
| GSMUA_Achr11P... | Banana | plastid | 29.32 | 46.41 |
| Bra016818.1-P | Field mustard | cytosol | 36.96 | 45.32 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 40.75 | 42.93 |
| TraesCS1B01G368500.1 | Wheat | plastid | 15.65 | 27.6 |
| TraesCS7B01G018600.1 | Wheat | cytosol | 8.7 | 26.87 |
| TraesCS6B01G336400.1 | Wheat | plastid | 10.43 | 24.93 |
| TraesCS2B01G390700.1 | Wheat | plastid | 9.25 | 24.87 |
| TraesCS1B01G155700.3 | Wheat | plastid | 10.43 | 22.61 |
| TraesCS7B01G093800.2 | Wheat | plastid | 10.43 | 21.05 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF345 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | EnsemblPlantsGene:TraesCS1B01G119300 |
| EnsemblPlants:TraesCS1B01G119300.1 | TIGR:cd03791 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:+:141283814..141295848
Molecular Weight (calculated)
181312.0 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.465
Length
1610 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMSLWPRSP LCPRSRQPLV VVRPAGRGGL TQPFLMNGRF TRSRTLRCMV ASSDPPNRKS RRMVPPQVKV ISSRGYTTRL IVEPSNENTE HNNRDEETLD
0101: TYNALLSTET AEWTDNREAE TAKADSSQNA LSSSIIGEVD VADEDILAAD LTVYSLSSVM KTEVDAADKA RVKEDVFELD LPATTLRSVI VDVMDHNGTV
0201: QETLRSVIVD VMDDAADKAR VEEDVFELDL SGNISSSATT VELDAVDEVG PVQDTFEATS SGNVSNSTTV REVDAIDEAG NDQDIFRADL SGNVFSSITT
0301: VEVGAVDEAG SIKDRFETDS SGNVSTSATM WDAIDETVAD QETFEADLSG NASSCATYRE VDDVVDETRS EEETFAMDLF ASDSGHEKHM AVDYVGEATD
0401: EEEIYQQQYP VLSSFSMWDK AIAKTGVSLN PEMRLVRVQE QDKVNFSDKK DLSIDDLPGQ NQSIIGSYKQ DKSVADVAEP TQSIFGSSKQ HRSIVAFPKQ
0501: NQSIVGVPKQ KQSIVGFRSQ DLSTVSLPKQ NIPIVGTSRE GQTKHVPVVD RQDALYVNGL EAKEGDHTSE KTDEDALHVN FNVDNVLRKH QANRTQAMET
0601: TTWKKVDEEH LHITEHQIGG AEGQMVVNED ELSITEIGMG RGDKIQHVLS EEELSCSEDE VQLIVDDRQY EVDETSVSIN VEQDIQGSPQ DVVDPQALRV
0701: MLQELAEKNY SMRNKLFVFP EVVKADSVID LYLNRDLTAL ANEPDVVIKG AFNGWKWRLF TERLHKSDLG GVWWSCKLYI PKEAYRLDFV FFNGRTVYEN
0801: NGNNDFCIGI EGTMNEDLFE DFLVKEKQRE LEKLAMEEAE RRTQTEEQRR RKEARAADEA VRAQAKAEIE IKKKKLQSML SLARTCVDNL WYIEASTDTR
0901: GDTIRLYYNR NSRPLAHSTE IWMHGGYNNW TDGLSIVESF VKCNDKDGDW WYADVIPPEK ALVLDWVFAD GPAGNARNYD NNARQDFHAI LPNNNVTEEG
1001: FWAQEEQNIY TRLLQERREK EETMKRKAER SANIKAEMKA KTMRRFLLSQ KHIVYTEPLE IRAGTTVDVL YNPSNTVLNG KSEVWFRCSF NLWMHPSGAL
1101: PPQKMVKSGD GPLLKATVDV PPDAYMMDFV FSEWEEDGIY DNRNGMDYHI PVSDSIETEN YMRIIHIAVE MAPVAKVGGL GDVVTSLSRA IQDLGHTVEV
1201: ILPKYDCLNQ SSVKDLHLYQ SFSWGGTEIK VWVGRVEDLT VYFLEPQNGM FGVGCVYGRN DDRRFGFFCH SALEFILQNE FSPHIIHCHD WSSAPVAWLY
1301: KEHYSQSRMA STRVVFTIHN LEFGAHYIGK AMTYCDKATT VSPTYSRDVA GHGAIAPHRE KFYGILNGID PDIWDPYTDN FIPVPYTCEN VVEGKRAAKR
1401: ALQQKFGLQQ TDVPIVGIIT RLTAQKGIHL IKHAIHRTLE SNGQVVLLGS APDHRIQGDF CRLADALHGV YHGRVKLVLT YDEPLSHLIY AGSDFIIVPS
1501: IFEPCGLTQL VAMRYGSIPI VRKTGGLHDT VFDVDNDKDR ARSLGLEPNG FSFDGADSNG VDYALNRAIG AWFDARDWFH SLCKRVMEQD WSWNRPALDY
1601: IELYHAARKF
0101: TYNALLSTET AEWTDNREAE TAKADSSQNA LSSSIIGEVD VADEDILAAD LTVYSLSSVM KTEVDAADKA RVKEDVFELD LPATTLRSVI VDVMDHNGTV
0201: QETLRSVIVD VMDDAADKAR VEEDVFELDL SGNISSSATT VELDAVDEVG PVQDTFEATS SGNVSNSTTV REVDAIDEAG NDQDIFRADL SGNVFSSITT
0301: VEVGAVDEAG SIKDRFETDS SGNVSTSATM WDAIDETVAD QETFEADLSG NASSCATYRE VDDVVDETRS EEETFAMDLF ASDSGHEKHM AVDYVGEATD
0401: EEEIYQQQYP VLSSFSMWDK AIAKTGVSLN PEMRLVRVQE QDKVNFSDKK DLSIDDLPGQ NQSIIGSYKQ DKSVADVAEP TQSIFGSSKQ HRSIVAFPKQ
0501: NQSIVGVPKQ KQSIVGFRSQ DLSTVSLPKQ NIPIVGTSRE GQTKHVPVVD RQDALYVNGL EAKEGDHTSE KTDEDALHVN FNVDNVLRKH QANRTQAMET
0601: TTWKKVDEEH LHITEHQIGG AEGQMVVNED ELSITEIGMG RGDKIQHVLS EEELSCSEDE VQLIVDDRQY EVDETSVSIN VEQDIQGSPQ DVVDPQALRV
0701: MLQELAEKNY SMRNKLFVFP EVVKADSVID LYLNRDLTAL ANEPDVVIKG AFNGWKWRLF TERLHKSDLG GVWWSCKLYI PKEAYRLDFV FFNGRTVYEN
0801: NGNNDFCIGI EGTMNEDLFE DFLVKEKQRE LEKLAMEEAE RRTQTEEQRR RKEARAADEA VRAQAKAEIE IKKKKLQSML SLARTCVDNL WYIEASTDTR
0901: GDTIRLYYNR NSRPLAHSTE IWMHGGYNNW TDGLSIVESF VKCNDKDGDW WYADVIPPEK ALVLDWVFAD GPAGNARNYD NNARQDFHAI LPNNNVTEEG
1001: FWAQEEQNIY TRLLQERREK EETMKRKAER SANIKAEMKA KTMRRFLLSQ KHIVYTEPLE IRAGTTVDVL YNPSNTVLNG KSEVWFRCSF NLWMHPSGAL
1101: PPQKMVKSGD GPLLKATVDV PPDAYMMDFV FSEWEEDGIY DNRNGMDYHI PVSDSIETEN YMRIIHIAVE MAPVAKVGGL GDVVTSLSRA IQDLGHTVEV
1201: ILPKYDCLNQ SSVKDLHLYQ SFSWGGTEIK VWVGRVEDLT VYFLEPQNGM FGVGCVYGRN DDRRFGFFCH SALEFILQNE FSPHIIHCHD WSSAPVAWLY
1301: KEHYSQSRMA STRVVFTIHN LEFGAHYIGK AMTYCDKATT VSPTYSRDVA GHGAIAPHRE KFYGILNGID PDIWDPYTDN FIPVPYTCEN VVEGKRAAKR
1401: ALQQKFGLQQ TDVPIVGIIT RLTAQKGIHL IKHAIHRTLE SNGQVVLLGS APDHRIQGDF CRLADALHGV YHGRVKLVLT YDEPLSHLIY AGSDFIIVPS
1501: IFEPCGLTQL VAMRYGSIPI VRKTGGLHDT VFDVDNDKDR ARSLGLEPNG FSFDGADSNG VDYALNRAIG AWFDARDWFH SLCKRVMEQD WSWNRPALDY
1601: IELYHAARKF
0001: MISYFLNQDF SRKKQGRMAA SGPKSSGPRG FGRRTTVGSA QKRTQKKNGE KDSNATSTAT NEVSGISKLP AAKVDVQKQS SVVLNERNVL DRSDIEDGSD
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
0101: RLDKKTTDDD DLLEQKLKLE RENLRRKEIE TLAAENLARG DRMFVYPVIV KPDEDIEVFL NRNLSTLNNE PDVLIMGAFN EWRWKSFTRR LEKTWIHEDW
0201: LSCLLHIPKE AYKMDFVFFN GQSVYDNNDS KDFCVEIKGG MDKVDFENFL LEEKLREQEK LAKEEAERER QKEEKRRIEA QKAAIEADRA QAKAETQKRR
0301: ELLQPAIKKA VVSAENVWYI EPSDFKAEDT VKLYYNKRSG PLTNSKELWL HGGFNNWVDG LSIVVKLVNA ELKDVDPKSG NWWFAEVVVP GGALVIDWVF
0401: ADGPPKGAFL YDNNGYQDFH ALVPQKLPEE LYWLEEENMI FRKLQEDRRL KEEVMRAKME KTARLKAETK ERTLKKFLLS QKDVVYTEPL EIQAGNPVTV
0501: LYNPANTVLN GKPEVWFRGS FNRWTHRLGP LPPQKMEATD DESSHVKTTA KVPLDAYMMD FVFSEKEDGG IFDNKNGLDY HLPVVGGISK EPPLHIVHIA
0601: VEMAPIAKVG GLGDVVTSLS RAVQELNHNV DIVFPKYDCI KHNFVKDLQF NRSYHWGGTE IKVWHGKVEG LSVYFLDPQN GLFQRGCVYG CADDAGRFGF
0701: FCHAALEFLL QGGFHPDILH CHDWSSAPVS WLFKDHYTQY GLIKTRIVFT IHNLEFGANA IGKAMTFADK ATTVSPTYAK EVAGNSVISA HLYKFHGIIN
0801: GIDPDIWDPY NDNFIPVPYT SENVVEGKRA AKEELQNRLG LKSADFPVVG IITRLTHQKG IHLIKHAIWR TLERNGQVVL LGSAPDPRIQ NDFVNLANQL
0901: HSSHGDRARL VLTYDEPLSH LIYAGADFIL VPSIFEPCGL TQLIAMRYGA VPVVRKTGGL FDTVFDVDHD KERAQAQVLE PNGFSFDGAD APGVDYALNR
1001: AISAWYDGRE WFNSLCKTVM EQDWSWNRPA LEYLELYHSA RK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.