Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G190100.1 | Wheat | plastid | 95.61 | 95.49 |
| TraesCS7A01G189000.1 | Wheat | plastid | 94.99 | 95.23 |
| HORVU7Hr1G038420.1 | Barley | plastid | 91.73 | 85.51 |
| KRH01182 | Soybean | cytosol | 25.69 | 77.07 |
| KXG19644 | Sorghum | plastid | 69.8 | 72.34 |
| Zm00001d037234_P005 | Maize | plastid | 66.67 | 70.46 |
| CDY34695 | Canola | plastid | 12.28 | 68.53 |
| Bra021486.1-P | Field mustard | endoplasmic reticulum | 17.29 | 65.4 |
| Os06t0229800-01 | Rice | plastid | 65.66 | 64.69 |
| TraesCS6B01G336400.1 | Wheat | plastid | 54.39 | 64.39 |
| CDY43274 | Canola | plastid | 52.13 | 59.6 |
| CDY37538 | Canola | plastid | 50.0 | 58.94 |
| KRG93537 | Soybean | plastid | 52.88 | 54.52 |
| KRH18473 | Soybean | plastid | 52.51 | 53.99 |
| Bra039138.1-P | Field mustard | plastid | 51.25 | 53.05 |
| Solyc02g088000.2.1 | Tomato | nucleus, plastid | 51.0 | 52.99 |
| VIT_14s0108g00940.t01 | Wine grape | plastid | 53.01 | 52.88 |
| PGSC0003DMT400003356 | Potato | cytosol | 50.75 | 52.8 |
| AT3G01180.1 | Thale cress | plastid | 52.38 | 52.78 |
| TraesCS1B01G155700.3 | Wheat | plastid | 47.12 | 50.61 |
| KRH15937 | Soybean | plastid | 8.15 | 50.0 |
| CDY55806 | Canola | plastid | 33.71 | 48.64 |
| TraesCS7B01G018600.1 | Wheat | cytosol | 29.7 | 45.49 |
| Bra021487.1-P | Field mustard | cytosol | 20.55 | 44.2 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 19.3 | 38.69 |
| TraesCS2B01G390700.1 | Wheat | plastid | 24.94 | 33.22 |
| TraesCS1B01G368500.1 | Wheat | plastid | 22.31 | 19.5 |
| TraesCS2B01G491700.2 | Wheat | plastid | 21.3 | 13.32 |
| TraesCS1B01G119300.1 | Wheat | plastid | 21.05 | 10.43 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G093800.2 | EnsemblPlantsGene:TraesCS7B01G093800 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0016740 | HAMAP:MF_00484 | InterPro:GS/SS | InterPro:Glyco_trans_1 | InterPro:Starch_synth_cat_dom | KEGG:00500+2.4.1.21 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF371 | PFAM:PF00534 | PFAM:PF08323 | SEG:seg | SUPFAM:SSF53756 |
| TIGR:cd03791 | TIGRFAMs:TIGR02095 | MapMan:3.2.2.4.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:107604543..107611108
Molecular Weight (calculated)
86799.6 Da
IEP (calculated)
6.733
GRAVY (calculated)
-0.391
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAVASAAS FLALASASPG RSRRRTRVSA SPPHTGAGRL HWPPSPPQRT ARDGAVAARA AGKKDAGIDD AAPARQPRAL RGGAATKVAE RRDPVKTLDR
101: DAAEGGAPSP PAPRQEDARL PSMNGMPVNG ENKSTGGGGA TKDSGLPAPA RAPQPSSQNR VPVNGENKAN VASPPTSIAE VAAPDPAATI SISDKAPESV
201: VPAEKAPPSS GSNFVPSASA PGSDTVSDVE LELKKGAVIV KEAPNPKALS PPAAPAVQQD LWDFKKYIGF EEPVEAKDDG RAVADDAGSF EHHQNHDSGP
301: LAGENVMNVV VVAAECSPWC KTGGLGDVAG ALPKALAKRG HRVMVVVPRY GDYEEAYDVG VRKYYKAAGQ DMEVNYFHAY IDGVDFVFID APLFRHRQED
401: IYGGSRQEIM KRMILFCKAA VEVPWHVPCG GVPYGDGNLV FIANDWHTAL LPVYLKAYYR DHGLMQYTRS IMVIHNIAHQ GRGPVDEFPF TELPEHYLEH
501: FRLYDPVGGE HANYFAAGLK MADQVVVVSP GYLWELKTVE GGWGLHDIIR QNDWKTRGIV NGIDNMEWNP EVDVHLKSDG YTNFSLGTLD SGKRQCKEAL
601: QRELGLQVRG DVPLLGFIGR LDGQKGVEII ADAMPWIVSQ DVQLVMLGTG RHDLEGMLRH FEREHHDKVR GWVGFSVRLA HRITAGADAL LMPSRFEPCG
701: LNQLYAMAYG TVPVVHAVGG LRDTVPPFDP FNHSGLGWTF DRAEAQKLIE ALGHCLRTYR DYKESWRGLQ ERGMSQDFSW EHAAKLYEDV LVKAKYQW
101: DAAEGGAPSP PAPRQEDARL PSMNGMPVNG ENKSTGGGGA TKDSGLPAPA RAPQPSSQNR VPVNGENKAN VASPPTSIAE VAAPDPAATI SISDKAPESV
201: VPAEKAPPSS GSNFVPSASA PGSDTVSDVE LELKKGAVIV KEAPNPKALS PPAAPAVQQD LWDFKKYIGF EEPVEAKDDG RAVADDAGSF EHHQNHDSGP
301: LAGENVMNVV VVAAECSPWC KTGGLGDVAG ALPKALAKRG HRVMVVVPRY GDYEEAYDVG VRKYYKAAGQ DMEVNYFHAY IDGVDFVFID APLFRHRQED
401: IYGGSRQEIM KRMILFCKAA VEVPWHVPCG GVPYGDGNLV FIANDWHTAL LPVYLKAYYR DHGLMQYTRS IMVIHNIAHQ GRGPVDEFPF TELPEHYLEH
501: FRLYDPVGGE HANYFAAGLK MADQVVVVSP GYLWELKTVE GGWGLHDIIR QNDWKTRGIV NGIDNMEWNP EVDVHLKSDG YTNFSLGTLD SGKRQCKEAL
601: QRELGLQVRG DVPLLGFIGR LDGQKGVEII ADAMPWIVSQ DVQLVMLGTG RHDLEGMLRH FEREHHDKVR GWVGFSVRLA HRITAGADAL LMPSRFEPCG
701: LNQLYAMAYG TVPVVHAVGG LRDTVPPFDP FNHSGLGWTF DRAEAQKLIE ALGHCLRTYR DYKESWRGLQ ERGMSQDFSW EHAAKLYEDV LVKAKYQW
001: MATVTASSNF VSRTSLFNNH GASSCSDVAQ ITLKGQSLTH CGLRSFNMVD NLQRRSQAKP VSAKSSKRSS KVKTAGKIVC EKGMSVIFIG AEVGPWSKTG
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP
Arabidopsis Description
GBSS1Granule-bound starch synthase 1, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MAQ0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.