Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37538 | Canola | plastid | 75.25 | 88.04 |
| CDY43274 | Canola | plastid | 77.53 | 87.97 |
| Bra039138.1-P | Field mustard | plastid | 84.34 | 86.64 |
| CDY55806 | Canola | plastid | 54.92 | 78.66 |
| Bra021487.1-P | Field mustard | cytosol | 31.82 | 67.92 |
| Solyc02g088000.2.1 | Tomato | nucleus, plastid | 61.24 | 63.15 |
| PGSC0003DMT400003356 | Potato | cytosol | 61.11 | 63.1 |
| VIT_14s0108g00940.t01 | Wine grape | plastid | 63.26 | 62.62 |
| TraesCS6D01G287000.1 | Wheat | plastid | 52.27 | 62.44 |
| TraesCS6B01G336400.1 | Wheat | plastid | 52.9 | 62.17 |
| HORVU6Hr1G075950.4 | Barley | plastid | 52.65 | 61.78 |
| TraesCS6A01G307800.1 | Wheat | plastid | 52.53 | 61.54 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 30.68 | 61.06 |
| Os02t0744700-01 | Rice | nucleus | 52.15 | 61.0 |
| Zm00001d052263_P001 | Maize | plastid | 52.78 | 59.71 |
| EES05532 | Sorghum | plastid | 52.78 | 59.38 |
| Zm00001d018033_P001 | Maize | plastid | 50.76 | 58.43 |
| OQU91730 | Sorghum | cytosol | 49.62 | 57.46 |
| TraesCS1B01G155700.3 | Wheat | plastid | 52.9 | 56.39 |
| TraesCS1D01G138100.2 | Wheat | plastid | 53.28 | 56.19 |
| TraesCS1A01G137200.1 | Wheat | plastid | 53.28 | 56.19 |
| Os10t0437600-00 | Rice | plastid | 52.27 | 55.27 |
| KXG19644 | Sorghum | plastid | 52.4 | 53.9 |
| Zm00001d037234_P005 | Maize | plastid | 51.26 | 53.77 |
| Zm00001d014150_P005 | Maize | plastid | 51.89 | 53.1 |
| TraesCS7B01G093800.2 | Wheat | plastid | 52.78 | 52.38 |
| TraesCS7A01G189000.1 | Wheat | plastid | 52.4 | 52.14 |
| TraesCS7D01G190100.1 | Wheat | plastid | 52.4 | 51.94 |
| HORVU1Hr1G035960.19 | Barley | cytosol, plastid | 52.53 | 51.81 |
| Os06t0229800-01 | Rice | plastid | 52.53 | 51.36 |
| GSMUA_Achr1P24640_001 | Banana | cytosol | 12.12 | 48.48 |
| HORVU7Hr1G038420.1 | Barley | plastid | 51.89 | 48.01 |
| AT5G24300.1 | Thale cress | plastid | 34.09 | 41.41 |
| AT1G32900.1 | Thale cress | plastid | 27.78 | 36.07 |
| AT4G18240.1 | Thale cress | plastid | 23.23 | 17.69 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 22.98 | 16.64 |
| AT5G65685.5 | Thale cress | extracellular, golgi | 8.08 | 12.67 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.2 | Gene3D:3.40.50.2000 | EntrezGene:820294 | ProteinID:AAF26156.1 | ProteinID:AEE73621.1 |
| ArrayExpress:AT3G01180 | EnsemblPlantsGene:AT3G01180 | RefSeq:AT3G01180 | TAIR:AT3G01180 | RefSeq:AT3G01180-TAIR-G | EnsemblPlants:AT3G01180.1 |
| TAIR:AT3G01180.1 | EMBL:AY054467 | Unigene:At.18317 | Symbol:AtSS2 | EMBL:BT002555 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009011 | GO:GO:0009058 | GO:GO:0009501 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010021 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0019252 | GO:GO:0033201 | InterPro:GS/SS | InterPro:Glyco_trans_1 | EMBL:KJ138848 | HAMAP:MF_00484 |
| RefSeq:NP_186767.1 | PFAM:PF00534 | PFAM:PF08323 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF371 |
| UniProt:Q9MAC8 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | TIGRFAMs:TIGR02095 | UniParc:UPI0000048687 | UniProt:W8QNS2 |
| SEG:seg | : | : | : | : | : |
Description
SS2Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNS2]
Coordinates
chr3:-:62245..66111
Molecular Weight (calculated)
87597.6 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.419
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.