CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021486.1-P	Field mustard	endoplasmic reticulum	92.31	62.56
CDY55806	Canola	plastid	95.1	24.59
CDY37538	Canola	plastid	90.21	19.05
CDY43274	Canola	plastid	91.61	18.77
TraesCS6D01G287000.1	Wheat	plastid	72.03	15.54
Os02t0744700-01	Rice	nucleus	73.43	15.51
TraesCS6B01G336400.1	Wheat	plastid	72.03	15.28
HORVU6Hr1G075950.4	Barley	plastid	72.03	15.26
TraesCS6A01G307800.1	Wheat	plastid	72.03	15.24
OQU91730	Sorghum	cytosol	72.03	15.06
PGSC0003DMT400003356	Potato	cytosol	80.42	14.99
Solyc02g088000.2.1	Tomato	nucleus, plastid	80.42	14.97
Zm00001d018033_P001	Maize	plastid	69.93	14.53
VIT_14s0108g00940.t01	Wine grape	plastid	80.42	14.38
Zm00001d052263_P001	Maize	plastid	69.93	14.29
EES05532	Sorghum	plastid	69.93	14.2
TraesCS1B01G155700.3	Wheat	plastid	73.43	14.13
TraesCS1A01G137200.1	Wheat	plastid	74.13	14.11
Os10t0437600-00	Rice	plastid	73.43	14.02
TraesCS1D01G138100.2	Wheat	plastid	73.43	13.98
Zm00001d037234_P005	Maize	plastid	73.43	13.91
KRH15937	Soybean	plastid	12.59	13.85
Zm00001d014150_P005	Maize	plastid	72.73	13.44
KXG19644	Sorghum	plastid	71.33	13.25
Os06t0229800-01	Rice	plastid	73.43	12.96
HORVU1Hr1G035960.19	Barley	cytosol, plastid	72.73	12.95
TraesCS7B01G093800.2	Wheat	plastid	68.53	12.28
TraesCS7A01G189000.1	Wheat	plastid	67.83	12.19
TraesCS7D01G190100.1	Wheat	plastid	67.13	12.02
HORVU7Hr1G038420.1	Barley	plastid	67.83	11.33
CDX88091	Canola	plastid	47.55	10.45
CDX80428	Canola	plastid	47.55	10.45
CDY34693	Canola	endoplasmic reticulum, golgi	23.08	8.29
CDX73274	Canola	plastid	15.38	5.76
CDY71840	Canola	plastid	11.89	5.63
CDY08902	Canola	plastid	27.97	3.92
CDX76534	Canola	plastid	27.97	3.92
GSMUA_Achr1P24640_001	Banana	cytosol	4.9	3.54
CDY45619	Canola	plastid	15.38	3.34
CDY49799	Canola	mitochondrion	23.78	3.13
CDX97980	Canola	plastid	23.78	3.12
CDY21007	Canola	plastid	23.08	3.1
CDY31209	Canola	plastid	23.08	3.08
CDY08760	Canola	plastid	14.69	3.06
CDY21006	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY34695	EnsemblPlantsGene:GSBRNA2T00057210001	Gene3D:3.40.50.2000	InterPro:Starch_synth_cat_dom	KEGG:00500+2.4.1.21	MetaCyc:PWY-622
PANTHER:PTHR12526	PANTHER:PTHR12526:SF542	PFAM:PF08323	ProteinID:CDY34695	ProteinID:CDY34695.1	SUPFAM:SSF53756
UniParc:UPI0004EE481E	UniPathway:UPA00164	UniProt:A0A078H852	MapMan:35.1	:	:

Description

BnaA01g33300DBnaA01g33300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H852]

Coordinates

chrLK032340:+:12158..13249

Molecular Weight (calculated)

16518.6 Da

IEP (calculated)

7.751

GRAVY (calculated)

-0.397

Length

143 amino acids

Sequence
(BLAST)

001: MKYTRSVLVI HNIAHQGRGP VDDFSYVDLP GHYLDSFKLY DPVGGEHFNI FAAGLKAADR VLTVRHGYSW EVRTVRFKPA LRDEVWNRSA GKLIHALGNC
101: LLTYREYKES WEGLLRRGMA QDLSWDNAAE NYEEVLVAAK YQW

Best Arabidopsis Sequence Match ( AT3G01180.1 )
(BLAST)

001: MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW

Arabidopsis Description

SS2Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNS2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.