Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31209 | Canola | plastid | 96.52 | 95.71 |
| CDY49799 | Canola | mitochondrion | 91.82 | 89.95 |
| CDX97980 | Canola | plastid | 90.5 | 88.18 |
| CDX76534 | Canola | plastid | 26.91 | 28.04 |
| CDY08902 | Canola | plastid | 26.91 | 28.04 |
| Solyc02g091770.1.1 | Tomato | mitochondrion | 7.24 | 25.5 |
| CDY37538 | Canola | plastid | 15.99 | 25.11 |
| CDX80428 | Canola | plastid | 15.33 | 25.04 |
| CDX88091 | Canola | plastid | 15.24 | 24.88 |
| CDY43274 | Canola | plastid | 16.27 | 24.79 |
| HORVU0Hr1G005540.2 | Barley | cytosol | 23.61 | 24.78 |
| PGSC0003DMT400078688 | Potato | cytosol | 8.75 | 23.85 |
| CDY34695 | Canola | plastid | 3.1 | 23.08 |
| KXG31317 | Sorghum | plastid | 14.86 | 22.64 |
| Solyc02g091760.1.1 | Tomato | cytosol | 3.86 | 21.93 |
| CDY45619 | Canola | plastid | 13.17 | 21.24 |
| CDY08760 | Canola | plastid | 12.89 | 19.97 |
| VIT_07s0205g00110.t01 | Wine grape | cytosol, nucleus | 8.94 | 19.55 |
| Zm00001d051976_P002 | Maize | plastid | 9.6 | 19.47 |
| CDY55806 | Canola | plastid | 9.41 | 18.08 |
| Os02t0807100-01 | Rice | plastid | 5.17 | 17.74 |
| CDY71840 | Canola | plastid | 4.89 | 17.22 |
| CDY34693 | Canola | endoplasmic reticulum, golgi | 6.02 | 16.08 |
| CDX73274 | Canola | plastid | 5.08 | 14.14 |
| CDY21006 | Canola | nucleus | 0.09 | 0.5 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | GO:A0A078G7K6 | UniProt:A0A078G7K6 | InterPro:CBM25 |
| EnsemblPlants:CDY21007 | ProteinID:CDY21007 | ProteinID:CDY21007.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0030246 | GO:GO:2001070 | InterPro:GS/SS |
| EnsemblPlantsGene:GSBRNA2T00015165001 | HAMAP:MF_00484 | PFAM:PF08323 | PFAM:PF16760 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 |
| MetaCyc:PWY-622 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | UniPathway:UPA00164 | UniParc:UPI0004EF0C15 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g25180DBnaA08g25180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7K6]
Coordinates
chrLK032115:+:299204..304107
Molecular Weight (calculated)
120897.0 Da
IEP (calculated)
6.493
GRAVY (calculated)
-0.438
Length
1063 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVCWQIQTP TSLRPGFQQK GRLKINTFIG FLPRPISSLA SLESQYNSNG FLHQITASAD FSRKKQGRMS ASGPKSSAPR GFGRRTTVGS AQKRTQKKNV
0101: EKDSNATSTV TNEGLGVSNL PEAKADVQKQ ALAEDDVLLE QKLKVERESL RRKEIEALAE EALARGDRMF VYPLVAKPDE DIEVFLNKTL STLSNEPDVL
0201: IMGAFNDWRW KSFTRRLEKT EELHGDWLSC LLHIPKEAYK MDFVFFNGQS VYDNNDSKDF CVDVKGGMDK VEFENFLLEE KWREQEKLAK EEAERERQEE
0301: EKRRIEARKA AIEADREQAK VETQKRREML QPALQKAVVS SENVWYIEPK DFKGGDKVKI YYNKSYGPLA YAKEVWIHGG FNNWIDGLSI VEKLKADSKS
0401: EDWWFAEVIV PVGALVIDWV FADGPPKEAF LYDNNSLQDF HALVPLRTPE ELYWSEEESL IFRKLQEERR LKEEAMRVKM EKTARLKAET KERTLKKFLL
0501: SQKDVVYTEP LEIQAGSPVT VFYNPSNTVL NGKPEVWFRG SFNRWTHRLG PLPPQKMEAA DDGSSHVKTS AKVPLDAYMM DFVFSEKEDG GVFDNRYGLD
0601: YHLPVVGGIA KEPPLHIVHI AVEMAPIAKV GGLGDVVTSL SRAVQELNHN VDIIFPKYDC IKYNFVKDLQ FNRSYHWGDT EIKVWHGKVE GVSVYFLDPQ
0701: NGLFQRGCVY GCADDAGRFG FFCHAALEFL LQGGFHPDIL HCHDWSSAPV SWLFKDLYTH YGLIKTRVVF TIHNLEFGAS AIGKAMTFSD KATTVSRTYA
0801: KEVAGNSVIS PHLYKFHGIV NGIDPDIWDP YNDNFIPVPY TSENVVEGKR AAKEELQNRL GLKSADLPLV GIITRLTHQK GIHLIKHAIW RTLERNGQVV
0901: LLGSAPDPRI QNDFVNLANQ LHSTHGDRAR LVLTYDEPLS HLIYAGADFI LVPSIFEPCG LTQLIAMRYG AVPVVRKTGG LYDTVFDVDH DKERAQAQVL
1001: EPNGFSFDGA DAPGVDYALN RAISAWYDGR EWFNSLCKTV MEQDWSWNRP ALEYIELYHS ARK
0101: EKDSNATSTV TNEGLGVSNL PEAKADVQKQ ALAEDDVLLE QKLKVERESL RRKEIEALAE EALARGDRMF VYPLVAKPDE DIEVFLNKTL STLSNEPDVL
0201: IMGAFNDWRW KSFTRRLEKT EELHGDWLSC LLHIPKEAYK MDFVFFNGQS VYDNNDSKDF CVDVKGGMDK VEFENFLLEE KWREQEKLAK EEAERERQEE
0301: EKRRIEARKA AIEADREQAK VETQKRREML QPALQKAVVS SENVWYIEPK DFKGGDKVKI YYNKSYGPLA YAKEVWIHGG FNNWIDGLSI VEKLKADSKS
0401: EDWWFAEVIV PVGALVIDWV FADGPPKEAF LYDNNSLQDF HALVPLRTPE ELYWSEEESL IFRKLQEERR LKEEAMRVKM EKTARLKAET KERTLKKFLL
0501: SQKDVVYTEP LEIQAGSPVT VFYNPSNTVL NGKPEVWFRG SFNRWTHRLG PLPPQKMEAA DDGSSHVKTS AKVPLDAYMM DFVFSEKEDG GVFDNRYGLD
0601: YHLPVVGGIA KEPPLHIVHI AVEMAPIAKV GGLGDVVTSL SRAVQELNHN VDIIFPKYDC IKYNFVKDLQ FNRSYHWGDT EIKVWHGKVE GVSVYFLDPQ
0701: NGLFQRGCVY GCADDAGRFG FFCHAALEFL LQGGFHPDIL HCHDWSSAPV SWLFKDLYTH YGLIKTRVVF TIHNLEFGAS AIGKAMTFSD KATTVSRTYA
0801: KEVAGNSVIS PHLYKFHGIV NGIDPDIWDP YNDNFIPVPY TSENVVEGKR AAKEELQNRL GLKSADLPLV GIITRLTHQK GIHLIKHAIW RTLERNGQVV
0901: LLGSAPDPRI QNDFVNLANQ LHSTHGDRAR LVLTYDEPLS HLIYAGADFI LVPSIFEPCG LTQLIAMRYG AVPVVRKTGG LYDTVFDVDH DKERAQAQVL
1001: EPNGFSFDGA DAPGVDYALN RAISAWYDGR EWFNSLCKTV MEQDWSWNRP ALEYIELYHS ARK
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.