Factsheet for Zm00001d051976_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31317	Sorghum	plastid	82.25	61.75
Solyc02g091770.1.1	Tomato	mitochondrion	27.29	47.35
PGSC0003DMT400078688	Potato	cytosol	26.91	36.15
Os02t0807100-01	Rice	plastid	20.61	34.84
Bra024412.1-P	Field mustard	plastid	37.21	32.88
KRH74428	Soybean	plastid	42.56	32.6
AT5G65685.5	Thale cress	extracellular, golgi	31.11	32.28
CDY08760	Canola	plastid	41.41	31.63
CDY45619	Canola	plastid	39.69	31.56
VIT_07s0205g00090.t01	Wine grape	plastid	11.64	27.85
KRH39530	Soybean	cytosol	13.36	25.45
VIT_07s0205g00110.t01	Wine grape	cytosol, nucleus	20.61	22.22
Solyc02g091760.1.1	Tomato	cytosol	6.3	17.65
Zm00001d010821_P002	Maize	plastid	27.1	15.62
Zm00001d033690_P001	Maize	cytosol, plastid	10.11	15.59
Zm00001d045261_P006	Maize	plastid	13.17	12.32
Zm00001d029360_P001	Maize	cytosol	5.73	12.0
Zm00001d045462_P001	Maize	plastid	13.17	11.33
Zm00001d033937_P002	Maize	plastid	13.17	11.33
Zm00001d019479_P004	Maize	plastid	12.6	10.54
Zm00001d018033_P001	Maize	plastid	13.55	10.32
Zm00001d052263_P001	Maize	plastid	13.36	10.0
CDY21007	Canola	plastid	19.47	9.6
Zm00001d027242_P002	Maize	plastid	10.69	9.56
Zm00001d026337_P013	Maize	plastid	20.23	8.9
Zm00001d037234_P005	Maize	plastid	12.79	8.87
Zm00001d002256_P012	Maize	plastid	19.85	8.75
Zm00001d014150_P005	Maize	plastid	12.21	8.27
Zm00001d000002_P002	Maize	plastid	19.85	6.2
HORVU0Hr1G005540.2	Barley	cytosol	3.44	1.78
CDY21006	Canola	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d051976_P002	EnsemblPlants:Zm00001d051976_T002	EnsemblPlantsGene:Zm00001d051976	Gene3D:3.40.50.2000	InterPro:Starch_synth_cat_dom	KEGG:00500+2.4.1.21
ncoils:Coil	PANTHER:PTHR12526	PANTHER:PTHR12526:SF382	PFAM:PF08323	ProteinID:AQK55665.1	SEG:seg
SUPFAM:SSF53756	UniParc:UPI0008426BB1	UniProt:A0A1D6QBP0	MapMan:35.1	:	:

Description

starch synthase5 starch synthase5

Coordinates

chr4:-:175714876..175730530

Molecular Weight (calculated)

58828.6 Da

IEP (calculated)

6.745

GRAVY (calculated)

-0.205

Length

524 amino acids

Sequence
(BLAST)

001: METPRLVVGA ASRAPPPAPR SQRRRILRPC GGAHCSPSAR AAPPVLLTRC SSYSSSREGN GDSHDILYIN KQRLIAMEEM KKLHDENNLL LEEIQGLETE
101: MQGAVSVANI FRLRNYMDDN VKFLNLQQSY ADCIPLEAAQ SSSFSELLLR IDTMVISGMI SMTEASDLRE KLVTNRSIIQ STFCDIHHKP NTELLSELQL
201: FLRKPIDTSS GVGLVIIEPS QLSYFSRDML RGYPDDFERF SYFSRASLDY IVKSGKRPDI IHIHNWETAI VAPLFWEIFA HQGLGNTRIL LTCQDLNSEC
301: LEEPNKLEMC GLDPRKLHRP DRLQDTNKTH LVNILKGGIV YSNKVVLMSS THSKDALIQG SRHELQSTLA AHREKILVAS YGLDGELWDP FKDIYLPRRY
401: SANDIEGKSI CRQALRRRLR FNGDSSIIVG CICDDNSDVH SLKEAVHVAL HRNTQVCGSV VNSILQALKG EIKGDKIAFV EAYDEALAHL IYAGSDIILC
501: SSFQDPSLQI AVCETSLLFS CFFQ

Best Arabidopsis Sequence Match ( AT5G65685.10 )
(BLAST)

001: MILNKQRLAA VDELEQLKKD KEELLERINQ LEAESQIVIK KDKSSLFWEL LLRIDSMVIN GLVNIEEASS MRKLVKEHEA NISVFPLDVL QQGDAEILAE
101: LRRFTNKGKR NGLHVIHICT EMAPLVSVGP LASYITGLSC ALQEEGYMVE VILPKYSTLD LDEIEGLREI EADAYSYFDG QLHANRIWNG VVSGIGVTLI
201: QPVYYSSMFS RDKVYGYQDD FDRFAYFSRA SLDYIAKSGK QPDVLHIHNW QTAIVGPLFW DVFVNQGLEG TRILLTCQDF DKGLVPPEKL ELCGLDPAEL
301: HRLDRLQDNT NPHFVNILKG GVVYSNKVVI MSSSHSSIPG LEPTLAIHKD KLFFAPFGMD NSMEKDLCCD LHVSAYTSIK NL

Arabidopsis Description

UDP-Glycosyltransferase superfamily protein [Source:TAIR;Acc:AT5G65685]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.