Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78343 | Sorghum | plastid | 93.29 | 93.29 |
| TraesCS1A01G353300.1 | Wheat | cytosol | 63.15 | 83.67 |
| TraesCS1D01G356900.1 | Wheat | plastid | 76.9 | 76.56 |
| TraesCS1B01G368500.1 | Wheat | plastid | 76.68 | 76.34 |
| Os05t0533600-02 | Rice | plastid | 74.7 | 73.88 |
| HORVU1Hr1G080950.5 | Barley | plastid | 76.02 | 72.28 |
| GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 16.61 | 68.33 |
| Os01t0720600-01 | Rice | plastid | 65.35 | 60.92 |
| GSMUA_Achr3P16340_001 | Banana | plastid | 43.67 | 54.16 |
| GSMUA_Achr8P27560_001 | Banana | plastid | 55.89 | 54.04 |
| Solyc02g071040.2.1 | Tomato | nucleus | 56.33 | 51.15 |
| PGSC0003DMT400021444 | Potato | plastid | 56.33 | 51.15 |
| VIT_10s0003g02880.t01 | Wine grape | plastid | 56.66 | 50.94 |
| KRH58438 | Soybean | nucleus | 55.23 | 50.76 |
| KRH42312 | Soybean | nucleus | 54.79 | 50.3 |
| CDX76534 | Canola | plastid | 55.23 | 49.22 |
| Bra021017.1-P | Field mustard | plastid | 55.12 | 49.12 |
| CDY08902 | Canola | plastid | 55.12 | 49.12 |
| AT4G18240.1 | Thale cress | plastid | 55.34 | 48.37 |
| Zm00001d045261_P006 | Maize | plastid | 16.94 | 27.5 |
| Zm00001d029360_P001 | Maize | cytosol | 7.48 | 27.2 |
| Zm00001d051976_P002 | Maize | plastid | 15.62 | 27.1 |
| Zm00001d033690_P001 | Maize | cytosol, plastid | 9.9 | 26.47 |
| Zm00001d018033_P001 | Maize | plastid | 19.14 | 25.29 |
| Zm00001d019479_P004 | Maize | plastid | 17.27 | 25.08 |
| Zm00001d052263_P001 | Maize | plastid | 19.25 | 25.0 |
| Zm00001d033937_P002 | Maize | plastid | 16.72 | 24.96 |
| Zm00001d045462_P001 | Maize | plastid | 16.72 | 24.96 |
| Zm00001d037234_P005 | Maize | plastid | 18.59 | 22.38 |
| Zm00001d014150_P005 | Maize | plastid | 18.59 | 21.83 |
| Zm00001d026337_P013 | Maize | plastid | 27.17 | 20.74 |
| Zm00001d002256_P012 | Maize | plastid | 26.62 | 20.37 |
| Zm00001d027242_P002 | Maize | plastid | 12.65 | 19.62 |
| Zm00001d000002_P002 | Maize | plastid | 26.62 | 14.43 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.4 | Gene3D:3.40.50.2000 | ProteinID:AQK95027.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005975 | GO:GO:0005982 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009011 | GO:GO:0009058 |
| GO:GO:0009501 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0019252 | InterPro:GS/SS | InterPro:Glyco_trans_1 | UniProt:K7V1M1 | HAMAP:MF_00484 | PFAM:PF00534 |
| PFAM:PF08323 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF539 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | TIGRFAMs:TIGR02095 |
| UniParc:UPI00004FF2B1 | EnsemblPlantsGene:Zm00001d010821 | EnsemblPlants:Zm00001d010821_P002 | EnsemblPlants:Zm00001d010821_T002 | SEG:seg | : |
Description
starch synthase4 starch synthase4
Coordinates
chr8:+:128734662..128743577
Molecular Weight (calculated)
103107.0 Da
IEP (calculated)
6.427
GRAVY (calculated)
-0.381
Length
909 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSAAAGAE ATALLFRSAA PSTIVGRHRL AMSRRTSRRN LRTGVHPHQK SAPSANHRNR ASIQRDRASA SIDEEQKQMS EDENGLLDIQ LEDLVGMIQN
101: TQKNILLLNQ ARLQALERAD KILKEKETLQ QKINILEMKL SETGKQSVLS SEVKSDEESL EFDVVKEENM LLKDEMNFLK GKLIEITETE ESLFKLEKEC
201: ALLNASLREL ECTSTSAQSD VLKLGPLQQD AWWEKVENLE DLLDSTANQV EHASLTLDGY RDFQDKVDKL KASLGTTNVS EFCLYLVDIL QQRVKSVEER
301: FQACNHEMHS QIELYEHSIV EFHGTLSKLI NESEKKSMEH YAEGMPSEFW SRISLLIDGW SLEKKISIND ASMLREMAWK RDNRLREAYL SSRGMEEREL
401: IDSFLKMALP GTSSGLHIVH IAAEMAPVAK VGGLADVISG LGKALQKKGH LVEIILPKYD CMQHNQINNL KVLDVVVKSY FEGNMFANKI WTGTVEGLPV
501: YFIEPQHPGK FFWRAQYYGE HDDFKRFSYF SRVALELLYQ SGKKVDIIHC HDWQTAFVAP LYWDVYANLG FNSARICFTC HNFEYQGIAP AQDLAYCGLD
601: VDHLDRPDRM RDNSHGRINV VKGAVVYSNI VTTVSPTYAQ EVRSEGGRGL QDTLKVHSKK FVGILNGIDT DTWNPSTDRF LKVQYSANDL YGKSANKAAL
701: RKQLKLASTQ ASQPLVGCIT RLVPQKGVHL IRHAIYKITE LGGQFVLLGS SPVQHIQREF EGIADQFQNN NNVRLLLKYD DALAHMIFAA SDMFIVPSMF
801: EPCGLTQMVA MRYGSVPVVR RTGGLNDSVF DLDDETIPME VRNGFTFLKA DEQDFGNALE RAFNYYHRKP EVWKQLVQKD MKIDFSWDTS VSQYEEIYQK
901: TATRARAAA
101: TQKNILLLNQ ARLQALERAD KILKEKETLQ QKINILEMKL SETGKQSVLS SEVKSDEESL EFDVVKEENM LLKDEMNFLK GKLIEITETE ESLFKLEKEC
201: ALLNASLREL ECTSTSAQSD VLKLGPLQQD AWWEKVENLE DLLDSTANQV EHASLTLDGY RDFQDKVDKL KASLGTTNVS EFCLYLVDIL QQRVKSVEER
301: FQACNHEMHS QIELYEHSIV EFHGTLSKLI NESEKKSMEH YAEGMPSEFW SRISLLIDGW SLEKKISIND ASMLREMAWK RDNRLREAYL SSRGMEEREL
401: IDSFLKMALP GTSSGLHIVH IAAEMAPVAK VGGLADVISG LGKALQKKGH LVEIILPKYD CMQHNQINNL KVLDVVVKSY FEGNMFANKI WTGTVEGLPV
501: YFIEPQHPGK FFWRAQYYGE HDDFKRFSYF SRVALELLYQ SGKKVDIIHC HDWQTAFVAP LYWDVYANLG FNSARICFTC HNFEYQGIAP AQDLAYCGLD
601: VDHLDRPDRM RDNSHGRINV VKGAVVYSNI VTTVSPTYAQ EVRSEGGRGL QDTLKVHSKK FVGILNGIDT DTWNPSTDRF LKVQYSANDL YGKSANKAAL
701: RKQLKLASTQ ASQPLVGCIT RLVPQKGVHL IRHAIYKITE LGGQFVLLGS SPVQHIQREF EGIADQFQNN NNVRLLLKYD DALAHMIFAA SDMFIVPSMF
801: EPCGLTQMVA MRYGSVPVVR RTGGLNDSVF DLDDETIPME VRNGFTFLKA DEQDFGNALE RAFNYYHRKP EVWKQLVQKD MKIDFSWDTS VSQYEEIYQK
901: TATRARAAA
0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
Arabidopsis Description
SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.