Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 5
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH58438 | Soybean | nucleus | 94.14 | 94.24 |
GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 16.06 | 71.95 |
VIT_10s0003g02880.t01 | Wine grape | plastid | 70.0 | 68.55 |
TraesCS1A01G353300.1 | Wheat | cytosol | 45.15 | 65.16 |
PGSC0003DMT400021444 | Potato | plastid | 65.86 | 65.13 |
Solyc02g071040.2.1 | Tomato | nucleus | 65.76 | 65.03 |
Bra021017.1-P | Field mustard | plastid | 65.96 | 64.02 |
CDX76534 | Canola | plastid | 65.86 | 63.92 |
CDY08902 | Canola | plastid | 65.25 | 63.33 |
AT4G18240.1 | Thale cress | plastid | 66.46 | 63.27 |
GSMUA_Achr8P27560_001 | Banana | plastid | 57.98 | 61.06 |
TraesCS1B01G368500.1 | Wheat | plastid | 53.03 | 57.5 |
TraesCS1D01G356900.1 | Wheat | plastid | 52.93 | 57.39 |
Os05t0533600-02 | Rice | plastid | 52.63 | 56.69 |
GSMUA_Achr3P16340_001 | Banana | plastid | 41.72 | 56.34 |
OQU78343 | Sorghum | plastid | 51.41 | 56.0 |
HORVU1Hr1G080950.5 | Barley | plastid | 52.93 | 54.81 |
Zm00001d010821_P002 | Maize | plastid | 50.3 | 54.79 |
Os01t0720600-01 | Rice | plastid | 52.32 | 53.13 |
KRH01182 | Soybean | cytosol | 8.28 | 30.83 |
KRH74428 | Soybean | plastid | 21.21 | 30.7 |
KRH39530 | Soybean | cytosol | 7.58 | 27.27 |
KRH34245 | Soybean | plastid | 16.67 | 27.14 |
KRH06370 | Soybean | nucleus, plastid | 16.87 | 26.98 |
KRG92546 | Soybean | plastid | 16.36 | 26.78 |
KRH47803 | Soybean | nucleus | 16.67 | 26.66 |
KRH53506 | Soybean | plastid | 16.77 | 26.18 |
KRH64431 | Soybean | plastid | 16.87 | 25.65 |
KRH51091 | Soybean | plastid | 27.68 | 25.32 |
KRH20852 | Soybean | plastid | 28.28 | 24.37 |
KRH11434 | Soybean | plastid | 28.38 | 24.1 |
KRH16258 | Soybean | extracellular | 3.23 | 23.53 |
KRH18473 | Soybean | plastid | 18.08 | 23.07 |
KRG93537 | Soybean | plastid | 17.68 | 22.61 |
KRH15937 | Soybean | plastid | 2.22 | 16.92 |
Protein Annotations
KEGG:00500+2.4.1.21 | EntrezGene:100804775 | MapMan:3.2.2.4.4 | Gene3D:3.40.50.2000 | EMBL:ACUP02004798 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_08G082600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009011 |
GO:GO:0009058 | GO:GO:0009501 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016740 |
GO:GO:0016757 | GO:GO:0019252 | InterPro:GS/SS | InterPro:Glyco_trans_1 | UniProt:K7L5I8 | EnsemblPlants:KRH42312 |
ProteinID:KRH42312 | ProteinID:KRH42312.1 | ProteinID:KRH42313.1 | ProteinID:KRH42314.1 | HAMAP:MF_00484 | PFAM:PF00534 |
PFAM:PF08323 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF341 | MetaCyc:PWY-622 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom |
TIGRFAMs:TIGR02095 | UniParc:UPI00023C6283 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:6255669..6264833
Molecular Weight (calculated)
111876.0 Da
IEP (calculated)
5.584
GRAVY (calculated)
-0.467
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKLRTCFM CWNLSGFNCV NHHNGRNRVV RVSFPASCEM RHRATFSSQH KRQQIKPSAE GGLRQNQDEE DDAAEVSLNN DDSVENLNDA TAPLAINING
101: AEQAEQLSGR QLEDLLGMIK NAEKNILLLN EARVRSLEDL EKILAEKEAL QGEINVLETR LAETDAQIKV ANQEKIHVEL LEGQLEKLRN ELAQKESTEG
201: KYSELHDLQN GGLSDANPLS HNDSIHSLTE ELNSLRAENA SLKNTIESFK TQLSDTKNND ERLVALEKER SSLESALKDL ESKLSISQDD VSKISTLTVE
301: YKDLWDKVEN LQSLLDKATK QADQAVIVLQ QNQDLRRKVD KLEESLEEAN IYKLSSDKLQ KYSELMQQKL KLLEDRLQKT DEEINSYVQL YQQSVKEFQD
401: TLDTLKEESK KGNLEEPVED MPWEFWSQLL LLIDGWKLEK KISVDDASLL REKVWKRDRR IIDTYIACKK QSEQEAISAF LGLLSSATSP GLHVIHIAAE
501: MAPVAKVGGL GDVVSGLGKA LQKKGHLVEI VLPKYDCMQY DRVCDLRALD VLIDSYFDRQ LYKNKIWVGT VEGLPVYFIE PHHPDKFFWR GEFYGERDDF
601: RRFSFFSRAA LEFLLRAGKK PDIIHCHDWQ TAFIAPLYWE IFAPKKGLNS ARICFTCHNF EYQGTAAASE LESCGLESHR LNRKDRMQDN SSHDRVNSVK
701: GGIVFSNIVT TVSPTYAQEV RTEEGGRGLH STLSVHSKKL IGIINGIDTD AWNPATDAFL PVQYNATDLQ GKAENKQALG RNLGLSSTDV RRPLVGCITR
801: LVPQKGVHLI RHAIYLTLEL GGQFVLLGSS PVPHIQKEFE GIANHFQNHD HIRLILKYDE SLSHAIYAAS DMFIIPSIFE PCGLTQMISM RYGAIPIVRK
901: TGGLNDSVFD VDDDTIPSQF RNGFTFVNAD EQGLNGALVR AFNLFNNNPE GWKQLVQKDM NIDFSWETSS AQYEELYLKS VARAKAAKGA
101: AEQAEQLSGR QLEDLLGMIK NAEKNILLLN EARVRSLEDL EKILAEKEAL QGEINVLETR LAETDAQIKV ANQEKIHVEL LEGQLEKLRN ELAQKESTEG
201: KYSELHDLQN GGLSDANPLS HNDSIHSLTE ELNSLRAENA SLKNTIESFK TQLSDTKNND ERLVALEKER SSLESALKDL ESKLSISQDD VSKISTLTVE
301: YKDLWDKVEN LQSLLDKATK QADQAVIVLQ QNQDLRRKVD KLEESLEEAN IYKLSSDKLQ KYSELMQQKL KLLEDRLQKT DEEINSYVQL YQQSVKEFQD
401: TLDTLKEESK KGNLEEPVED MPWEFWSQLL LLIDGWKLEK KISVDDASLL REKVWKRDRR IIDTYIACKK QSEQEAISAF LGLLSSATSP GLHVIHIAAE
501: MAPVAKVGGL GDVVSGLGKA LQKKGHLVEI VLPKYDCMQY DRVCDLRALD VLIDSYFDRQ LYKNKIWVGT VEGLPVYFIE PHHPDKFFWR GEFYGERDDF
601: RRFSFFSRAA LEFLLRAGKK PDIIHCHDWQ TAFIAPLYWE IFAPKKGLNS ARICFTCHNF EYQGTAAASE LESCGLESHR LNRKDRMQDN SSHDRVNSVK
701: GGIVFSNIVT TVSPTYAQEV RTEEGGRGLH STLSVHSKKL IGIINGIDTD AWNPATDAFL PVQYNATDLQ GKAENKQALG RNLGLSSTDV RRPLVGCITR
801: LVPQKGVHLI RHAIYLTLEL GGQFVLLGSS PVPHIQKEFE GIANHFQNHD HIRLILKYDE SLSHAIYAAS DMFIIPSIFE PCGLTQMISM RYGAIPIVRK
901: TGGLNDSVFD VDDDTIPSQF RNGFTFVNAD EQGLNGALVR AFNLFNNNPE GWKQLVQKDM NIDFSWETSS AQYEELYLKS VARAKAAKGA
0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
Arabidopsis Description
SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.