Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78343 | Sorghum | plastid | 75.63 | 76.46 |
| Zm00001d010821_P002 | Maize | plastid | 73.88 | 74.7 |
| GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 17.85 | 74.21 |
| Os01t0720600-01 | Rice | plastid | 66.7 | 62.87 |
| GSMUA_Achr8P27560_001 | Banana | plastid | 58.43 | 57.13 |
| VIT_10s0003g02880.t01 | Wine grape | plastid | 58.87 | 53.51 |
| GSMUA_Achr3P16340_001 | Banana | plastid | 42.66 | 53.48 |
| KRH58438 | Soybean | nucleus | 57.13 | 53.08 |
| KRH42312 | Soybean | nucleus | 56.69 | 52.63 |
| Solyc02g071040.2.1 | Tomato | nucleus | 57.13 | 52.45 |
| PGSC0003DMT400021444 | Potato | plastid | 57.13 | 52.45 |
| Bra021017.1-P | Field mustard | plastid | 55.39 | 49.9 |
| CDX76534 | Canola | plastid | 55.39 | 49.9 |
| CDY08902 | Canola | plastid | 55.06 | 49.61 |
| AT4G18240.1 | Thale cress | plastid | 55.5 | 49.04 |
| Os07t0412100-01 | Rice | plastid | 17.3 | 26.15 |
| Os06t0160700-01 | Rice | plastid | 17.85 | 25.59 |
| Os02t0744700-01 | Rice | nucleus | 18.39 | 24.96 |
| Os06t0133000-02 | Rice | plastid | 16.54 | 24.96 |
| Os02t0807100-01 | Rice | plastid | 7.4 | 21.94 |
| Os06t0229800-01 | Rice | plastid | 19.04 | 21.6 |
| Os10t0437600-00 | Rice | plastid | 17.41 | 21.36 |
| Os04t0624600-01 | Rice | plastid | 27.53 | 20.81 |
| Os08t0191433-01 | Rice | plastid | 26.33 | 15.58 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.4 | Gene3D:3.40.50.2000 | EntrezGene:4339426 | ProteinID:ACY56254.1 | ProteinID:ACY56255.1 |
| ProteinID:ACY56256.1 | ProteinID:ACY56257.1 | ProteinID:ACY56258.1 | ProteinID:ACY56259.1 | ncoils:Coil | UniProt:D0TZW8 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009501 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019252 |
| InterPro:GS/SS | InterPro:Glyco_trans_1 | HAMAP:MF_00484 | EnsemblPlantsGene:Os05g0533600 | EnsemblPlants:Os05t0533600-02 | PFAM:PF00534 |
| PFAM:PF08323 | PANTHER:PTHR12526 | PANTHER:PTHR12526:SF539 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | TIGRFAMs:TIGR02095 |
| UniParc:UPI00000A922E | SEG:seg | : | : | : | : |
Description
SOLUBLE STARCH SYNTHASE IVBStarch synthase, Starch biosynthesis (Os05t0533600-01);Starch synthase, Starch biosynthesis (Os05t0533600-02)
Coordinates
chr5:+:26485770..26493929
Molecular Weight (calculated)
104275.0 Da
IEP (calculated)
6.205
GRAVY (calculated)
-0.355
Length
919 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLAAGAEA APLLFRRRLA PSPVAARRRL LVSCRARRRG LRLVAQSAGS RGCGVVGAPG CDYWVNMQRD EASVSSDKER QEKYGDENGI SNLQLEDLIQ
101: MIQNTEKNIM LLNQARLQAL EHVETVLKEK EDLQRKLKIL ETRLSETDAR LKLSAEGQFG TEINDSLPVL ELDDIKEENM LLKDDIQFLK TMLIEVAETE
201: NSIFTLEKER ALLDASLREL ESRFIDAQAD MLKSDPRQYD AWWEKVENLG DLLETATNKV ENAAMVLGRN HDLEDKVDKL EASLAEANIS KFSCYFVDLL
301: QEKIKSVEER FQVCNHEMHS QIELYENSIA EFHDILSKLV EETEKRSLEH SASSMPSELW SRISLLIDGW LLEKRISYND ANTLREMVRK RDSCLREAYL
401: SCRGMKDREI VDNFLKITLP GTSSGLHIIH IAAEMAPVAK VGGLADVISG LGKALQKKGH LVEIILPKYD CMQNDQVNNL KVLDVVVQSY FEGNLFNNKI
501: WTGTVEGLPV YFIEPQHPAK FFWRAQYYGE HDDFKRFAYF SRAALELLYQ SQKKIDIIHC HDWQTAFVAP LYWEAYANLG FNSARICFTC HNFEYQGAAP
601: AQDLACCGLD VQQLDREDRM RDNSHGRINV VKGAIVYSNI VTTVSPTYAL EVRSEGGRGL QDSLKLHSRK FVGILNGIDT DTWNPSTDRH LKVQYNANDL
701: QGKAANKAAL RKQLNLSSTN ASQPLVGCIT RLVPQKGVHL IRHAIYKTAE LGGQFVLLGS SPVPHIQREF EGIADHFQNN NNIRLLLKYD DSLSHWIYAA
801: SDMFIVPSMF EPCGLTQMIA MRYGSVPIVR KTGGLNDSVF DFDDETIPKE LRNGFTFVHP DEKALSGAME RAFNYYNRKP EVWKQLVQKD MRIDFSWASS
901: ASQYEDIYQR AVARARAAA
101: MIQNTEKNIM LLNQARLQAL EHVETVLKEK EDLQRKLKIL ETRLSETDAR LKLSAEGQFG TEINDSLPVL ELDDIKEENM LLKDDIQFLK TMLIEVAETE
201: NSIFTLEKER ALLDASLREL ESRFIDAQAD MLKSDPRQYD AWWEKVENLG DLLETATNKV ENAAMVLGRN HDLEDKVDKL EASLAEANIS KFSCYFVDLL
301: QEKIKSVEER FQVCNHEMHS QIELYENSIA EFHDILSKLV EETEKRSLEH SASSMPSELW SRISLLIDGW LLEKRISYND ANTLREMVRK RDSCLREAYL
401: SCRGMKDREI VDNFLKITLP GTSSGLHIIH IAAEMAPVAK VGGLADVISG LGKALQKKGH LVEIILPKYD CMQNDQVNNL KVLDVVVQSY FEGNLFNNKI
501: WTGTVEGLPV YFIEPQHPAK FFWRAQYYGE HDDFKRFAYF SRAALELLYQ SQKKIDIIHC HDWQTAFVAP LYWEAYANLG FNSARICFTC HNFEYQGAAP
601: AQDLACCGLD VQQLDREDRM RDNSHGRINV VKGAIVYSNI VTTVSPTYAL EVRSEGGRGL QDSLKLHSRK FVGILNGIDT DTWNPSTDRH LKVQYNANDL
701: QGKAANKAAL RKQLNLSSTN ASQPLVGCIT RLVPQKGVHL IRHAIYKTAE LGGQFVLLGS SPVPHIQREF EGIADHFQNN NNIRLLLKYD DSLSHWIYAA
801: SDMFIVPSMF EPCGLTQMIA MRYGSVPIVR KTGGLNDSVF DFDDETIPKE LRNGFTFVHP DEKALSGAME RAFNYYNRKP EVWKQLVQKD MRIDFSWASS
901: ASQYEDIYQR AVARARAAA
0001: MTTKLSSFCF LTHGLAGISC EREHGSSRRF FYLPSRRLVS TSCKMRQQRG FDSSKRQEVK KGSPKPILSI NSGLQSNNDE ESDLENGSAD SVPSLKSDAE
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
0101: KGSSIHGSID MNHADENLEK KDDIQTTEVT RRKSKTAKKK GESIHATIDI GHDDGKNLDN ITVPEVAKAL SLNKSEGEQI SDGQFGELMT MIRSAEKNIL
0201: RLDEARATAL DDLNKILSDK EALQGEINVL EMKLSETDER IKTAAQEKAH VELLEEQLEK LRHEMISPIE SDGYVLALSK ELETLKLENL SLRNDIEMLK
0301: SELDSVKDTG ERVVVLEKEC SGLESSVKDL ESKLSVSQED VSQLSTLKIE CTDLWAKVET LQLLLDRATK QAEQAVIVLQ QNQDLRNKVD KIEESLKEAN
0401: VYKESSEKIQ QYNELMQHKV TLLEERLEKS DAEIFSYVQL YQESIKEFQE TLESLKEESK KKSRDEPVDD MPWDYWSRLL LTVDGWLLEK KIASNDADLL
0501: RDMVWKKDRR IHDTYIDVKD KNERDAISAF LKLVSSPTSS GLYVVHIAAE MAPVAKVGGL GDVVAGLGKA LQRKGHLVEI ILPKYDCMQY DRVRDLRALD
0601: TVVESYFDGK LYKNKIWIGT VEGLPVHFIE PQHPSKFFWR GQFYGEQDDF RRFSYFSRAA LELLLQSGKK PDIIHCHDWQ TAFVAPLYWD LYAPKGLDSA
0701: RICFTCHNFE YQGTASASEL GSCGLDVNQL NRPDRMQDHS SGDRVNPVKG AIIFSNIVTT VSPTYAQEVR TAEGGKGLHS TLNFHSKKFI GILNGIDTDS
0801: WNPATDPFLK AQFNAKDLQG KEENKHALRK QLGLSSAESR RPLVGCITRL VPQKGVHLIR HAIYRTLELG GQFVLLGSSP VPHIQREFEG IEQQFKSHDH
0901: VRLLLKYDEA LSHTIYAASD LFIIPSIFEP CGLTQMIAMR YGSIPIARKT GGLNDSVFDI DDDTIPTQFQ NGFTFQTADE QGFNYALERA FNHYKKDEEK
1001: WMRLVEKVMS IDFSWGSSAT QYEELYTRSV SRARAVPNRT
Arabidopsis Description
SS4Probable starch synthase 4, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WVX5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.