Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 18.12 | 87.12 |
| Bra019836.1-P | Field mustard | endoplasmic reticulum, vacuole | 31.43 | 70.26 |
| KRH51091 | Soybean | plastid | 56.43 | 58.41 |
| GSMUA_Achr11P... | Banana | plastid | 52.86 | 58.21 |
| CDY31209 | Canola | plastid | 55.54 | 58.02 |
| CDY49799 | Canola | mitochondrion | 55.89 | 57.7 |
| AT1G11720.2 | Thale cress | mitochondrion, plastid | 56.34 | 57.68 |
| CDX97980 | Canola | plastid | 55.8 | 57.29 |
| KRH20852 | Soybean | plastid | 57.95 | 56.48 |
| KRH11434 | Soybean | plastid | 57.95 | 55.66 |
| Solyc02g080570.2.1 | Tomato | nucleus, plastid | 59.46 | 54.15 |
| KXG27148 | Sorghum | mitochondrion, plastid | 57.5 | 54.07 |
| Zm00001d026337_P013 | Maize | plastid | 56.79 | 53.4 |
| Zm00001d002256_P012 | Maize | plastid | 56.61 | 53.37 |
| Os04t0624600-01 | Rice | plastid | 57.77 | 53.21 |
| TraesCS2B01G491700.2 | Wheat | plastid | 58.66 | 51.49 |
| TraesCS2A01G468800.1 | Wheat | plastid | 58.57 | 50.19 |
| HORVU2Hr1G106410.9 | Barley | cytosol | 58.66 | 49.44 |
| Bra016818.1-P | Field mustard | cytosol | 55.45 | 47.3 |
| TraesCS2D01G468900.2 | Wheat | endoplasmic reticulum, golgi | 58.04 | 46.33 |
| VIT_10s0116g01730.t01 | Wine grape | plastid | 63.04 | 46.2 |
| GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 7.59 | 38.46 |
| HORVU1Hr1G021590.5 | Barley | mitochondrion | 54.38 | 38.23 |
| Os08t0191433-01 | Rice | plastid | 52.95 | 38.18 |
| TraesCS1B01G119300.1 | Wheat | plastid | 54.02 | 37.58 |
| TraesCS1D01G100100.1 | Wheat | cytosol | 54.11 | 37.57 |
| TraesCS1A01G091500.1 | Wheat | plastid | 54.2 | 37.26 |
| KXG24650 | Sorghum | plastid | 55.98 | 37.23 |
| Zm00001d000002_P002 | Maize | plastid | 55.45 | 37.03 |
| GSMUA_Achr8P24090_001 | Banana | cytosol | 8.3 | 30.9 |
| GSMUA_Achr8P27560_001 | Banana | plastid | 22.14 | 26.38 |
| GSMUA_Achr1P08190_001 | Banana | cytosol, plastid | 13.39 | 24.35 |
| GSMUA_Achr1P06140_001 | Banana | plastid | 13.21 | 24.03 |
| GSMUA_Achr1P16620_001 | Banana | cytosol | 4.73 | 23.66 |
| GSMUA_Achr3P16340_001 | Banana | plastid | 15.45 | 23.6 |
| GSMUA_Achr9P20780_001 | Banana | plastid | 12.68 | 23.13 |
| GSMUA_Achr3P03290_001 | Banana | plastid | 14.02 | 22.72 |
| GSMUA_Achr4P10220_001 | Banana | plastid | 15.71 | 22.62 |
| GSMUA_Achr6P23190_001 | Banana | cytosol | 13.75 | 21.15 |
| GSMUA_Achr1P24650_001 | Banana | mitochondrion | 14.64 | 20.81 |
| GSMUA_Achr1P24640_001 | Banana | cytosol | 3.66 | 20.71 |
| GSMUA_Achr1P16610_001 | Banana | plastid | 5.18 | 19.02 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.3 | Gene3D:3.40.50.2000 | InterPro:CBM25 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004373 | GO:GO:0005488 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0030246 |
| GO:GO:2001070 | InterPro:GS/SS | EnsemblPlantsGene:GSMUA_Achr5G00700_001 | EnsemblPlants:GSMUA_Achr5P00700_001 | EnsemblPlants:GSMUA_Achr5T00700_001 | InterPro:Glyco_trans_1 |
| UniProt:M0SUJ9 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 | PFAM:PF16760 | PANTHER:PTHR12526 |
| PANTHER:PTHR12526:SF341 | SMART:SM01066 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | UniParc:UPI000296388C | SEG:seg |
Description
Soluble starch synthase 3, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G00700_001]
Coordinates
chr5:-:374301..395208
Molecular Weight (calculated)
126112.0 Da
IEP (calculated)
7.978
GRAVY (calculated)
-0.379
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALQPQRPVC CPGTVSENSH LRIRSVLGLF SQSSLRFQEV TRISATPRML AGSGYSKRQP RRSLIPMTKA SNPRGFAPKP QAGTSIRKKD QNKVDEKEVS
0101: GSSSSSKHTI SSSGLTDRRV AAGEKETKVA VSESNLGIID VDEPPEDQNG IAYTTTAIQE SLVKLKADMD ARAHKQLLEN LADQNFSRGN KVFVVPQIVN
0201: PDQVIKVFLN RSSSALANEA DVLIKGAYNG WRWKFFTEKL QKADIKGDWW SCQIYVPKEA YRVDYVFFNG ANTYENNNSE DFFLLVEGGM DEVAFEDFLL
0301: EEEHKKLKKL AAEQAEKERQ AKEQRRKEAE KVASEADRAQ AKVEVEKKKR GFNHVMKLAS NSAHHIWHIE PSLFKGGDRV RLYYNRSCRP LSHAAEIWIH
0401: GGFNNWDEGL SIIEKLSHSE KRDGDWWFAD VAVPGRALVL DWVFADGPPG KAIVYDNNNL QDFHATVPKS IPVEVSWVEE ENQIYRKFQE DRRSKEEAIR
0501: KKTEKTVRMK AETKERTMKL FLLSQKHIVY SEPIVVRAGR MVTVFYNPYH TVLNGKPEVW FKCSFNRWNH RKGPLPPQKM VPAENGSHLK ATVKVPMDAY
0601: MMDFVFSERE NGGIYDNRNR MDYHIPVTGG IAKEPPMHIV HIAVEMAPIA KVGGLGDVVT SLSRAVQDLG HTVVVVLPKY DCMNLSNVKD LHHRNSFAWG
0701: ETEISVWFGK VEGLPVYFLE PKNGMFSVGC IYGRSDDGHR FGFFCHAALE FLLQSGFRPD ILHCHDWSSA PVAWLFKEHY IYYGLSNARV IFTIHNLEFG
0801: VHNIGRAMTY ADKATTVSQT YSREVAGNPA ISPHLHKFHG IVNGIDPDIW DPYNDQFIPV PYTPENVVEG KKAAKEALQQ KLGLKTSDHP LVGIITRLTV
0901: QKGIHLIKHA VWRTLEHNGQ VVLLGSAPDS RIQNDFANLA SELHSSHGDR VRFCLTYNEP LSHLIYAGAD FILVPSLFEP CGLTQLIAMR YGSIPVVRRT
1001: GGLYDTVFDV DTERERAQAQ GLEPNGFSFD GADSADVDDV LNRHSNICLV RQTGMVSLAV QARDGARLVV ESTGFGLYGT LPFGTEQNIM MVWGEKSGTL
1101: FLKSLYSTVD HSLFPLVLYS
0101: GSSSSSKHTI SSSGLTDRRV AAGEKETKVA VSESNLGIID VDEPPEDQNG IAYTTTAIQE SLVKLKADMD ARAHKQLLEN LADQNFSRGN KVFVVPQIVN
0201: PDQVIKVFLN RSSSALANEA DVLIKGAYNG WRWKFFTEKL QKADIKGDWW SCQIYVPKEA YRVDYVFFNG ANTYENNNSE DFFLLVEGGM DEVAFEDFLL
0301: EEEHKKLKKL AAEQAEKERQ AKEQRRKEAE KVASEADRAQ AKVEVEKKKR GFNHVMKLAS NSAHHIWHIE PSLFKGGDRV RLYYNRSCRP LSHAAEIWIH
0401: GGFNNWDEGL SIIEKLSHSE KRDGDWWFAD VAVPGRALVL DWVFADGPPG KAIVYDNNNL QDFHATVPKS IPVEVSWVEE ENQIYRKFQE DRRSKEEAIR
0501: KKTEKTVRMK AETKERTMKL FLLSQKHIVY SEPIVVRAGR MVTVFYNPYH TVLNGKPEVW FKCSFNRWNH RKGPLPPQKM VPAENGSHLK ATVKVPMDAY
0601: MMDFVFSERE NGGIYDNRNR MDYHIPVTGG IAKEPPMHIV HIAVEMAPIA KVGGLGDVVT SLSRAVQDLG HTVVVVLPKY DCMNLSNVKD LHHRNSFAWG
0701: ETEISVWFGK VEGLPVYFLE PKNGMFSVGC IYGRSDDGHR FGFFCHAALE FLLQSGFRPD ILHCHDWSSA PVAWLFKEHY IYYGLSNARV IFTIHNLEFG
0801: VHNIGRAMTY ADKATTVSQT YSREVAGNPA ISPHLHKFHG IVNGIDPDIW DPYNDQFIPV PYTPENVVEG KKAAKEALQQ KLGLKTSDHP LVGIITRLTV
0901: QKGIHLIKHA VWRTLEHNGQ VVLLGSAPDS RIQNDFANLA SELHSSHGDR VRFCLTYNEP LSHLIYAGAD FILVPSLFEP CGLTQLIAMR YGSIPVVRRT
1001: GGLYDTVFDV DTERERAQAQ GLEPNGFSFD GADSADVDDV LNRHSNICLV RQTGMVSLAV QARDGARLVV ESTGFGLYGT LPFGTEQNIM MVWGEKSGTL
1101: FLKSLYSTVD HSLFPLVLYS
0001: MEVCWQIQRP ASLRPGFQEK GRVKINTFSV GFFPRSISSI ASLESQYKSN GFLHQITASA DFSRKKQGRM AASGPKSSGP RGFGRRTTVG SAQKRTQKKN
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
0101: GEKDSNATST ATNEVSGISK LPAAKVDVQK QSSVVLNERN VLDRSDIEDG SDRLDKKTTD DDDLLEQKLK LERENLRRKE IETLAAENLA RGDRMFVYPV
0201: IVKPDEDIEV FLNRNLSTLN NEPDVLIMGA FNEWRWKSFT RRLEKTWIHE DWLSCLLHIP KEAYKMDFVF FNGQSVYDNN DSKDFCVEIK GGMDKVDFEN
0301: FLLEEKLREQ EKLAKEEAER ERQKEEKRRI EAQKAAIEAD RAQAKAETQK RRELLQPAIK KAVVSAENVW YIEPSDFKAE DTVKLYYNKR SGPLTNSKEL
0401: WLHGGFNNWV DGLSIVVKLV NAELKDVDPK SGNWWFAEVV VPGGALVIDW VFADGPPKGA FLYDNNGYQD FHALVPQKLP EELYWLEEEN MIFRKLQEDR
0501: RLKEEVMRAK MEKTARLKAE TKERTLKKFL LSQKDVVYTE PLEIQAGNPV TVLYNPANTV LNGKPEVWFR GSFNRWTHRL GPLPPQKMEA TDDESSHVKT
0601: TAKVPLDAYM MDFVFSEKED GGIFDNKNGL DYHLPVVGGI SKEPPLHIVH IAVEMAPIAK VGGLGDVVTS LSRAVQELNH NVDIVFPKYD CIKHNFVKDL
0701: QFNRSYHWGG TEIKVWHGKV EGLSVYFLDP QNGLFQRGCV YGCADDAGRF GFFCHAALEF LLQGGFHPDI LHCHDWSSAP VSWLFKDHYT QYGLIKTRIV
0801: FTIHNLEFGA NAIGKAMTFA DKATTVSPTY AKEVAGNSVI SAHLYKFHGI INGIDPDIWD PYNDNFIPVP YTSENVVEGK RAAKEELQNR LGLKSADFPV
0901: VGIITRLTHQ KGIHLIKHAI WRTLERNGQV VLLGSAPDPR IQNDFVNLAN QLHSSHGDRA RLVLTYDEPL SHLIYAGADF ILVPSIFEPC GLTQLIAMRY
1001: GAVPVVRKTG GLFDTVFDVD HDKERAQAQV LEPNGFSFDG ADAPGVDYAL NRAISAWYDG REWFNSLCKT VMEQDWSWNR PALEYLELYH SARK
Arabidopsis Description
ATSS3SS3 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.