Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P24090_001 | Banana | cytosol | 32.83 | 79.4 |
| GSMUA_Achr1P24650_001 | Banana | mitochondrion | 68.82 | 63.58 |
| OQU91730 | Sorghum | cytosol | 55.49 | 59.06 |
| Os10t0437600-00 | Rice | plastid | 58.1 | 56.48 |
| GSMUA_Achr4P10220_001 | Banana | plastid | 60.03 | 56.17 |
| TraesCS1B01G155700.3 | Wheat | plastid | 56.59 | 55.45 |
| TraesCS1A01G137200.1 | Wheat | plastid | 57.14 | 55.39 |
| TraesCS1D01G138100.2 | Wheat | plastid | 56.87 | 55.13 |
| Zm00001d014150_P005 | Maize | plastid | 57.42 | 54.01 |
| GSMUA_Achr1P24640_001 | Banana | cytosol | 14.15 | 52.02 |
| HORVU1Hr1G035960.19 | Barley | cytosol, plastid | 57.28 | 51.93 |
| GSMUA_Achr3P03290_001 | Banana | plastid | 34.07 | 35.89 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, plastid | 11.4 | 35.62 |
| GSMUA_Achr1P06140_001 | Banana | plastid | 29.4 | 34.74 |
| GSMUA_Achr9P20780_001 | Banana | plastid | 28.98 | 34.36 |
| GSMUA_Achr1P08190_001 | Banana | cytosol, plastid | 28.71 | 33.93 |
| GSMUA_Achr1P16620_001 | Banana | cytosol | 9.75 | 31.7 |
| GSMUA_Achr1P16610_001 | Banana | plastid | 11.95 | 28.52 |
| GSMUA_Achr3P16350_001 | Banana | endoplasmic reticulum, vacuole | 8.65 | 28.51 |
| GSMUA_Achr8P27560_001 | Banana | plastid | 22.8 | 17.66 |
| GSMUA_Achr3P16340_001 | Banana | plastid | 14.84 | 14.73 |
| GSMUA_Achr5P00700_001 | Banana | plastid | 21.15 | 13.75 |
| GSMUA_Achr11P... | Banana | plastid | 9.34 | 6.69 |
Protein Annotations
| KEGG:00500+2.4.1.21 | MapMan:3.2.2.4.2 | Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004373 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009501 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019252 | InterPro:GS/SS | EnsemblPlantsGene:GSMUA_Achr6G23190_001 | EnsemblPlants:GSMUA_Achr6P23190_001 |
| EnsemblPlants:GSMUA_Achr6T23190_001 | InterPro:Glyco_trans_1 | UniProt:M0T9G7 | HAMAP:MF_00484 | PFAM:PF00534 | PFAM:PF08323 |
| PANTHER:PTHR12526 | PANTHER:PTHR12526:SF542 | SUPFAM:SSF53756 | InterPro:Starch_synth_cat_dom | TIGRFAMs:TIGR02095 | UniParc:UPI000295B5F1 |
| SEG:seg | : | : | : | : | : |
Description
Soluble starch synthase 2-1, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G23190_001]
Coordinates
chr6:+:23254551..23260090
Molecular Weight (calculated)
82371.6 Da
IEP (calculated)
4.606
GRAVY (calculated)
-0.347
Length
728 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGNPPGAIR RSSSAEGQED SDKDDEDITD DALRATIKQS KKVLEIQKNL LRQIVERRKF VSSIKDNFVT KEEETVSYNQ NYSSFSNMDI DNDEDFDRTN
101: NPWSYSDNYA QTTEADVLDY GEETIDGIEV EQSVAETLGL LREADLEPSQ PQDMPPVIFE ESEYYTMNDE ILEVSAEEGM QGSNEQQEVP PEEGIMDSAP
201: LAGPNVMNVI VVAAECAPWC LPVGGLGDVV GALPKSLARR GHRVMVVAPR YGNYAEPKEV GVRKRYKVDG QVFICSMSSW SETSCRYNII FLAFPLLVLQ
301: DMEVMYYHAF IDRVDFVFID SPVFRHIGND IYGGNRLDIL KRMILFCKAA VEVPWHVPCG GTCYGDGNLV FVANDWHTSL LPVYLKAYYR DNGLMIYARC
401: VLVIHNIAHQ GRGPINDFSY VDLPGHYMDF FKLYDPVGGE HFNIFAAGLK AADRLVTVSH GYAWELKTPE GGWGLHGIIN DNDWKFQGIV NGIDTRSWNP
501: KFDMYLQSDG YTNYSLETLQ MGKSQCKAAL QRELGLPVRD NVPIISFIGR LDDQKGVDLI ADAMSWLVDQ DLQLIMLGTG RPDLEDMLRK FESEHHDKVR
601: GWVGFSVKMA HRFTAGADVL LMPSRFEPCG LNQLYAMMYG TVPVVHAVGG LRDTVKQFDP FNETGLGWTF KRAEANKMIE ALGHCLNTYR NYKDSWEGLQ
701: RRGMMQDLSW DNAAQRYEDV LVAAKYQW
101: NPWSYSDNYA QTTEADVLDY GEETIDGIEV EQSVAETLGL LREADLEPSQ PQDMPPVIFE ESEYYTMNDE ILEVSAEEGM QGSNEQQEVP PEEGIMDSAP
201: LAGPNVMNVI VVAAECAPWC LPVGGLGDVV GALPKSLARR GHRVMVVAPR YGNYAEPKEV GVRKRYKVDG QVFICSMSSW SETSCRYNII FLAFPLLVLQ
301: DMEVMYYHAF IDRVDFVFID SPVFRHIGND IYGGNRLDIL KRMILFCKAA VEVPWHVPCG GTCYGDGNLV FVANDWHTSL LPVYLKAYYR DNGLMIYARC
401: VLVIHNIAHQ GRGPINDFSY VDLPGHYMDF FKLYDPVGGE HFNIFAAGLK AADRLVTVSH GYAWELKTPE GGWGLHGIIN DNDWKFQGIV NGIDTRSWNP
501: KFDMYLQSDG YTNYSLETLQ MGKSQCKAAL QRELGLPVRD NVPIISFIGR LDDQKGVDLI ADAMSWLVDQ DLQLIMLGTG RPDLEDMLRK FESEHHDKVR
601: GWVGFSVKMA HRFTAGADVL LMPSRFEPCG LNQLYAMMYG TVPVVHAVGG LRDTVKQFDP FNETGLGWTF KRAEANKMIE ALGHCLNTYR NYKDSWEGLQ
701: RRGMMQDLSW DNAAQRYEDV LVAAKYQW
001: MASVAESSFP LLCQIKTQRR INSSTLRHSR VSYHDLPSGS LSFRSRSFVL GHRCKCVSRV EASGSDDDEP EDALQATIDK SKKVLAMQRN LLHQIAERRK
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
101: LVSSIKESTP DLDDAKASSK QESASSVNAN TDATKKEIMD GDANGSVSPS TYGKSSLSKE PEAKTFSPST ESLKNRKQSS ASVISSSPVT SPQKPSDVAT
201: NGKPWSSVVA SSVDPPYKPS SVMTSPEKTS DPVTSPGKPS KSRAGAFWSD PLPSYLTKAP QTSTMKTEKY VEKTPDVASS ETNEPGKDEE KPPPLAGANV
301: MNVILVAAEC APFSKTGGLG DVAGALPKSL ARRGHRVMVV VPRYAEYAEA KDLGVRKRYK VAGQDMEVMY FHAFIDGVDF VFIDSPEFRH LSNNIYGGNR
401: LDILKRMVLF CKAAVEVPWY VPCGGVCYGD GNLAFIANDW HTALLPVYLK AYYRDHGIMK YTRSVLVIHN IAHQGRGPVD DFSYVDLPSH YLDSFKLYDP
501: VGGEHFNIFA AGLKAADRVL TVSHGYSWEV KTLEGGWGLH NIINENDWKF RGIVNGIDTQ EWNPEFDTYL HSDDYTNYSL ENLHIGKPQC KAALQKELGL
601: PVRPDVPLIG FIGRLDHQKG VDLIAEAVPW MMSQDVQLVM LGTGRPDLEE VLRQMEHQYR DKARGWVGFS VKTAHRITAG ADILLMPSRF EPCGLNQLYA
701: MNYGTIPVVH AVGGLRDTVQ QFDPYSETGL GWTFDSAEAG KLIHALGNCL LTYREYKESW EGLQRRGMTQ DLSWDNAAEK YEEVLVAAKY HW
Arabidopsis Description
SS2Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QNS2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.