Factsheet for GSMUA_Achr3P03290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G018600.1	Wheat	cytosol	53.55	71.02
Zm00001d045261_P006	Maize	plastid	55.86	68.93
HORVU7Hr1G025390.4	Barley	cytosol, plastid	54.12	65.04
VIT_16s0098g01780.t01	Wine grape	plastid	57.74	63.03
Os06t0160700-01	Rice	plastid	57.89	62.4
KXG19354	Sorghum	plastid	57.45	61.36
Solyc03g083090.2.1	Tomato	plastid	56.44	60.84
AT5G24300.1	Thale cress	plastid	56.58	59.97
Bra009747.1-P	Field mustard	plastid	56.3	59.75
CDX88091	Canola	plastid	56.3	59.75
PGSC0003DMT400047731	Potato	plastid	55.43	59.75
TraesCS7A01G120300.1	Wheat	plastid	55.28	59.32
CDX80428	Canola	plastid	55.28	58.68
TraesCS7D01G117800.1	Wheat	plastid	55.57	58.63
KRH64431	Soybean	plastid	54.99	58.37
KRH53506	Soybean	plastid	53.55	58.36
KRH16258	Soybean	extracellular	10.28	52.21
GSMUA_Achr8P24090_001	Banana	cytosol	22.0	50.5
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	12.3	36.48
GSMUA_Achr6P23190_001	Banana	cytosol	35.89	34.07
GSMUA_Achr1P06140_001	Banana	plastid	28.8	32.31
GSMUA_Achr4P10220_001	Banana	plastid	36.03	32.01
GSMUA_Achr1P08190_001	Banana	cytosol, plastid	28.08	31.49
GSMUA_Achr9P20780_001	Banana	plastid	27.93	31.43
GSMUA_Achr1P24650_001	Banana	mitochondrion	35.6	31.22
GSMUA_Achr3P16350_001	Banana	endoplasmic reticulum, vacuole	9.7	30.32
GSMUA_Achr1P16610_001	Banana	plastid	12.74	28.85
GSMUA_Achr1P24640_001	Banana	cytosol	8.1	28.28
GSMUA_Achr1P16620_001	Banana	cytosol	9.12	28.12
GSMUA_Achr8P27560_001	Banana	plastid	25.76	18.94
GSMUA_Achr3P16340_001	Banana	plastid	16.06	15.14
GSMUA_Achr5P00700_001	Banana	plastid	22.72	14.02
GSMUA_Achr11P...	Banana	plastid	9.99	6.78

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.1	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004373
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009011	GO:GO:0009058	GO:GO:0009501	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0010021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019252
InterPro:GS/SS	EnsemblPlantsGene:GSMUA_Achr3G03290_001	EnsemblPlants:GSMUA_Achr3P03290_001	EnsemblPlants:GSMUA_Achr3T03290_001	InterPro:Glyco_trans_1	UniProt:M0SBE7
HAMAP:MF_00484	PFAM:PF00534	PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF431	SUPFAM:SSF53756
InterPro:Starch_synth_cat_dom	TIGRFAMs:TIGR02095	UniParc:UPI00029559A2	SEG:seg	:	:

Description

Soluble starch synthase 1, chloroplastic/amyloplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G03290_001]

Coordinates

chr3:-:2147715..2159174

Molecular Weight (calculated)

76695.4 Da

IEP (calculated)

5.062

GRAVY (calculated)

-0.338

Length

691 amino acids

Sequence
(BLAST)

001: MAAICVHRTP FAASKPQPPH GGPRPSPPST VGSPRWIRRS YCSHVARWWS AAERRSRKEE DWPYLSAIGK AADPDGGAVQ ENGLLDPTLL AIGRTQNLGD
101: DSVGEQKTEE LAGVLEEEET NGDDSVSASR TVLDSSVEVS DSSTVPDCIV EETKAEKEVL MSSSALDVEE EEETDEQEQT QTRVTRTIVF VSAEAAPYSK
201: TGGLGDVCGS LPISLAARGH RVMVVSPRYL NGVSNKNFAN AMILESASRF CALEENMKFL FIMSTEQVFV DHPSYHRAGN PYGDSNGAFG DNQFRFTILC
301: YAACEAPLVL PLGGYTYGEK SLFIVNDWHA SLVAVLLAAK YRPYGVYKDA RSILVIHNLA HQGVEPATTY EYMGLPPEWY GALEWIFPTW ARKHALDKGE
401: AVNLLKGAIV TADRIVTVSQ GYSWEITTPE GGHGLNELLN SRKFVLNGIT NGIDTNEWNP TSDKHIPFHY SVDDLSGKAQ CKAALQKELG LPIRPDCPLI
501: GFIGRLDYQK GTDVIRSALH ELLQDDIQFI MLGSGNPETE DWMRWVESTN REKFRGWVGF NVPVSHRITA GCDILLMPSR YEPCGLNQLY AMRYGTVPVV
601: NCTGGLRDTV ENFDPFATDS SGQGTGWRFS PLSKESMLLK LRVAIQTYRE HKASWEGLMK RGMSKDFSWD SAAIQYERIF DWTFVDPPYI R

Best Arabidopsis Sequence Match ( AT5G24300.2 )
(BLAST)

001: MASLQISGSV KFEPFVGFNR IRHFRPIASL GFPRFRRRFS IGRSLLLRRS SSFSGDSRES DEERFITDAE RDGSGSVLGF QLTPPGDQQT VSTSTGEITH
101: HEEKKEAIDQ IVMADFGVPG NRAVEEGAAE VGIPSGKAEV VNNLVFVTSE AAPYSKTGGL GDVCGSLPIA LAGRGHRVMV ISPRYLNGTA ADKNYARAKD
201: LGIRVTVNCF GGSQEVSFYH EYRDGVDWVF VDHKSYHRPG NPYGDSKGAF GDNQFRFTLL CHAACEAPLV LPLGGFTYGE KSLFLVNDWH AGLVPILLAA
301: KYRPYGVYKD ARSILIIHNL AHQGVEPAAT YTNLGLPSEW YGAVGWVFPT WARTHALDTG EAVNVLKGAI VTSDRIITVS QGYAWEITTV EGGYGLQDLL
401: SSRKSVINGI TNGINVDEWN PSTDEHIPFH YSADDVSEKI KCKMALQKEL GLPIRPECPM IGFIGRLDYQ KGIDLIQTAG PDLMVDDIQF VMLGSGDPKY
501: ESWMRSMEET YRDKFRGWVG FNVPISHRIT AGCDILLMPS RFEPCGLNQL YAMRYGTIPV VHGTGGLRDT VENFNPYAEG GAGTGTGWVF TPLSKDSMVS
601: ALRLAAATYR EYKQSWEGLM RRGMTRNYSW ENAAVQYEQV FQWVFMDPPY VS

Arabidopsis Description

SS1Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QN76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.