Factsheet for HORVU7Hr1G025390.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G018600.1	Wheat	cytosol	88.87	98.08
TraesCS7A01G120300.1	Wheat	plastid	97.57	87.11
Zm00001d045261_P006	Maize	plastid	84.35	86.61
TraesCS7D01G117800.1	Wheat	plastid	98.09	86.11
Os06t0160700-01	Rice	plastid	88.7	79.56
KXG19354	Sorghum	plastid	86.26	76.66
VIT_16s0098g01780.t01	Wine grape	plastid	67.13	60.98
Solyc03g083090.2.1	Tomato	plastid	65.74	58.97
KRH53506	Soybean	plastid	64.17	58.2
PGSC0003DMT400047731	Potato	plastid	64.7	58.03
KRH64431	Soybean	plastid	65.22	57.6
AT5G24300.1	Thale cress	plastid	65.22	57.52
Bra009747.1-P	Field mustard	plastid	64.17	56.68
CDX88091	Canola	plastid	64.17	56.68
CDX80428	Canola	plastid	63.83	56.37
GSMUA_Achr3P03290_001	Banana	plastid	65.04	54.12
KRH16258	Soybean	extracellular	12.7	53.68
HORVU6Hr1G075950.4	Barley	plastid	43.65	37.19
HORVU7Hr1G012380.5	Barley	plastid	34.09	32.5
HORVU2Hr1G090980.3	Barley	plastid	33.22	32.21
HORVU1Hr1G035960.19	Barley	cytosol, plastid	41.91	30.01
HORVU7Hr1G038420.1	Barley	plastid	42.26	28.39
HORVU1Hr1G080950.5	Barley	plastid	28.17	16.95
HORVU2Hr1G106410.9	Barley	cytosol	26.09	11.29
HORVU1Hr1G021590.5	Barley	mitochondrion	25.57	9.23
HORVU0Hr1G005540.2	Barley	cytosol	1.57	0.89
HORVU0Hr1G005550.1	Barley	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.1	Gene3D:3.40.50.2000	UniProt:A0A287VRD7	GO:GO:0003674	GO:GO:0003824
GO:GO:0004373	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009011	GO:GO:0009058	GO:GO:0009501	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0010021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019252	InterPro:GS/SS	InterPro:Glyco_trans_1	EnsemblPlantsGene:HORVU7Hr1G025390	EnsemblPlants:HORVU7Hr1G025390.4	HAMAP:MF_00484
PFAM:PF00534	PFAM:PF08323	PANTHER:PTHR12526	PANTHER:PTHR12526:SF431	SUPFAM:SSF53756	InterPro:Starch_synth_cat_dom
TIGRFAMs:TIGR02095	UniParc:UPI000B460FB5	SEG:seg	:	:	:

Description

Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:A0A287VRD7]

Coordinates

chrchr7H:-:41834950..41841912

Molecular Weight (calculated)

63516.5 Da

IEP (calculated)

5.150

GRAVY (calculated)

-0.187

Length

575 amino acids

Sequence
(BLAST)

001: APPPPAPAQS PAPTQPPLPD AGVGELAPDL LLEGIAEDSI DTIVVAASEQ DSEIMDANDQ PLAKVTRSIV FVTGEAAPYA KSGGLGDVCG SLPIALAARG
101: HRVMVVMPRY LNGTSDKNYA KALYTGKHIK IPCFGGSHEV TFFHEYRDNV DWVFVDHPSY HRPGSLYGDN FGAFGDNQFR YTLLCYAACE APLILELGGY
201: IYGQSCMFVV NDWHASLVPV LLAAKYRPYG VYRDSRSTLV IHNLAHQGVE PASTYPDLGL PPEWYGALEW VFPEWARRHA LDKGEAVNFL KGAVVTADRI
301: VTVSQGYSWE VTTAEGGQGL NELLSSRKSV LNGIVNGIDI NDWNPTTDKC LPHHYSVDDL SGKAKCKAEL QRELGLPVRE DVPLIGFIGR LDYQKGIDLI
401: KMAIPDLMRE DVQFVMLGSG DPVFEGWMRS TESSYKDKFR GWVGFSVPVS HRITAGCDIL LMPSRFEPCG LNQLYAMQYG TVPVVHGTGG LRDTVETFNP
501: FGAKGEEGTG WAFSPLTVEK MLWALRTAIS TFREHKPSWE GLMKRGMTKD HTWDHAAEQY EQIFEWAFVD QPYVM

Best Arabidopsis Sequence Match ( AT5G24300.2 )
(BLAST)

001: MASLQISGSV KFEPFVGFNR IRHFRPIASL GFPRFRRRFS IGRSLLLRRS SSFSGDSRES DEERFITDAE RDGSGSVLGF QLTPPGDQQT VSTSTGEITH
101: HEEKKEAIDQ IVMADFGVPG NRAVEEGAAE VGIPSGKAEV VNNLVFVTSE AAPYSKTGGL GDVCGSLPIA LAGRGHRVMV ISPRYLNGTA ADKNYARAKD
201: LGIRVTVNCF GGSQEVSFYH EYRDGVDWVF VDHKSYHRPG NPYGDSKGAF GDNQFRFTLL CHAACEAPLV LPLGGFTYGE KSLFLVNDWH AGLVPILLAA
301: KYRPYGVYKD ARSILIIHNL AHQGVEPAAT YTNLGLPSEW YGAVGWVFPT WARTHALDTG EAVNVLKGAI VTSDRIITVS QGYAWEITTV EGGYGLQDLL
401: SSRKSVINGI TNGINVDEWN PSTDEHIPFH YSADDVSEKI KCKMALQKEL GLPIRPECPM IGFIGRLDYQ KGIDLIQTAG PDLMVDDIQF VMLGSGDPKY
501: ESWMRSMEET YRDKFRGWVG FNVPISHRIT AGCDILLMPS RFEPCGLNQL YAMRYGTIPV VHGTGGLRDT VENFNPYAEG GAGTGTGWVF TPLSKDSMVS
601: ALRLAAATYR EYKQSWEGLM RRGMTRNYSW ENAAVQYEQV FQWVFMDPPY VS

Arabidopsis Description

SS1Starch synthase, chloroplastic/amyloplastic (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8QN76]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.