Factsheet for HORVU7Hr1G012380.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G064300.1	Wheat	plastid	95.02	94.87
TraesCS7A01G070100.1	Wheat	plastid	94.86	94.7
TraesCS4A01G418200.1	Wheat	plastid	94.53	94.21
EER87785	Sorghum	plastid	83.42	82.73
Os06t0133000-02	Rice	plastid	83.08	82.27
Zm00001d045462_P001	Maize	plastid	82.42	81.61
Zm00001d033937_P002	Maize	plastid	82.42	81.61
GSMUA_Achr1P08190_001	Banana	cytosol, plastid	67.83	66.4
GSMUA_Achr1P06140_001	Banana	plastid	67.66	66.23
GSMUA_Achr9P20780_001	Banana	plastid	66.17	64.98
VIT_02s0025g02790.t01	Wine grape	plastid	65.01	64.79
KRG92546	Soybean	plastid	63.35	63.14
VIT_15s0048g02600.t01	Wine grape	plastid	64.18	63.03
Solyc08g083320.2.1	Tomato	plastid	62.69	62.79
PGSC0003DMT400031568	Potato	plastid	63.18	62.77
KRH34245	Soybean	plastid	63.18	62.66
AT1G32900.1	Thale cress	plastid	61.86	61.15
KRH47803	Soybean	nucleus	62.69	61.07
KRH06370	Soybean	nucleus, plastid	62.69	61.07
HORVU2Hr1G090980.3	Barley	plastid	60.03	61.05
GSMUA_Achr1P16610_001	Banana	plastid	30.18	59.67
CDY71840	Canola	plastid	29.85	59.6
Bra010189.1-P	Field mustard	nucleus	62.85	51.78
GSMUA_Achr1P16620_001	Banana	cytosol	19.07	51.34
CDX73274	Canola	plastid	32.34	51.05
HORVU7Hr1G025390.4	Barley	cytosol, plastid	32.5	34.09
HORVU6Hr1G075950.4	Barley	plastid	33.83	30.22
HORVU1Hr1G035960.19	Barley	cytosol, plastid	36.15	27.15
HORVU7Hr1G038420.1	Barley	plastid	35.16	24.77
HORVU1Hr1G080950.5	Barley	plastid	24.88	15.69
HORVU2Hr1G106410.9	Barley	cytosol	24.88	11.29
HORVU1Hr1G021590.5	Barley	mitochondrion	23.88	9.04
HORVU0Hr1G005540.2	Barley	cytosol	0.83	0.49
HORVU0Hr1G005550.1	Barley	cytosol	0.0	0.0

Protein Annotations

KEGG:00500+2.4.1.21	MapMan:3.2.2.4.5	Gene3D:3.40.50.2000	ProteinID:ADE08466.1	ProteinID:AHC55211.1	ProteinID:AHC55213.1
ProteinID:AHC55214.1	ProteinID:AHC55215.1	ProteinID:AHC55216.1	UniProt:C3W8L9	EMBL:FN179380	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004373	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009501	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0019252	GO:GO:0019863	GO:GO:0033840	GO:GO:0043531	GO:GO:0102502	InterPro:GS/SS
InterPro:Glyco_trans_1	EnsemblPlantsGene:HORVU7Hr1G012380	EnsemblPlants:HORVU7Hr1G012380.5	HAMAP:MF_00484	PFAM:PF00534	PFAM:PF08323
PANTHER:PTHR12526	PANTHER:PTHR12526:SF452	SUPFAM:SSF53756	InterPro:Starch_synth_cat_dom	TIGRFAMs:TIGR02095	UniParc:UPI00000A910A
SEG:seg	:	:	:	:	:

Description

Starch synthase, chloroplastic/amyloplastic [Source:UniProtKB/TrEMBL;Acc:C3W8L9]

Coordinates

chrchr7H:-:17089965..17094192

Molecular Weight (calculated)

66284.0 Da

IEP (calculated)

7.621

GRAVY (calculated)

-0.163

Length

603 amino acids

Sequence
(BLAST)

001: MAALATSQLA TSGTVLGVTD RFRRPGFQGL RPRNPADAAL GMRTIGASAA PKQSRKAHRG SRRCLSVVVR ATGSGMNLVF VGAEMAPWSK TGGLGDVLGG
101: LPPAMAANGH RVMVVSPRYD QYKDAWDTSV ISEIKVADEY ERVRFFHCYK RGVDRVFIDH PWFLEKVRGK TKEKIYGPDA GTDYEDNQQR FSLLCQAALE
201: APRILNLNNN PYFSGPYGED VVFVCNDWHT GLLACYLKSN YQSNGIYRTA KVAFCIHNIS YQGRFSFDDF AQLNLPDRFK SSFDFIDGYD KPVEGRKINW
301: MKAGILQADK VLTVSPYYAE ELISGEARGC ELDNIMRLTG ITGIVNGMDV SEWDPTKDKF LAVNYDITTA LEAKALNKEA LQAEVGLPVD RKVPLVAFIG
401: RLEEQKGPDV MIAAIPEILK EEDVQIILLG TGKKKFEKLL KSMEEKFPGK VRAVVRFNAP LAHQMMAGAD LLAVTSRFEP CGLIQLQGMR YGTPCVCAST
501: GGLVDTIVEG KTGFHMGRLS VDCNVVEPAD VKKVATTLKR AVKVVGTPAY QEMVKNCMIQ DLSWKGPAKN WEDVLLELGV EGSEPGIVGE EIAPLAMENV
601: AAP

Best Arabidopsis Sequence Match ( AT1G32900.1 )
(BLAST)

001: MATVTASSNF VSRTSLFNNH GASSCSDVAQ ITLKGQSLTH CGLRSFNMVD NLQRRSQAKP VSAKSSKRSS KVKTAGKIVC EKGMSVIFIG AEVGPWSKTG
101: GLGDVLGGLP PALAARGHRV MTICPRYDQY KDAWDTCVVV QIKVGDKVEN VRFFHCYKRG VDRVFVDHPI FLAKVVGKTG SKIYGPITGV DYNDNQLRFS
201: LLCQAALEAP QVLNLNSSKY FSGPYGEDVV FVANDWHTAL LPCYLKSMYQ SRGVYMNAKV VFCIHNIAYQ GRFAFDDYSL LNLPISFKSS FDFMDGYEKP
301: VKGRKINWMK AAILEAHRVL TVSPYYAQEL ISGVDRGVEL HKYLRMKTVS GIINGMDVQE WNPSTDKYID IKYDITTVTD AKPLIKEALQ AAVGLPVDRD
401: VPVIGFIGRL EEQKGSDILV EAISKFMGLN VQMVILGTGK KKMEAQILEL EEKFPGKAVG VAKFNVPLAH MITAGADFII VPSRFEPCGL IQLHAMRYGT
501: VPIVASTGGL VDTVKDGYTG FHIGRFNVKC EVVDPDDVIA TAKAVTRAVA VYGTSAMQEM VKNCMDQDFS WKGPARLWEK VLLSLNVAGS EAGTEGEEIA
601: PLAKENVATP

Arabidopsis Description

GBSS1Granule-bound starch synthase 1, chloroplastic/amyloplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9MAQ0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.