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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • mitochondrion 2
  • cytosol 3
  • plastid 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0923800-01
Os02t0510000-01
Os02t0708400-01
Os02t0828566-01
Os03t0401200-01
Os03t0422702-00
Os04t0388800-01
Os04t0654700-02
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Os02t0708400-01 AT3G27960.1 21798944
AT4G15700.1 Os04t0654700-02 AT1G22920.1 21798944
AT4G15700.1 Os06t0207966-00 AT1G73360.1 21798944
AT4G15700.1 Os06t0208100-00 AT1G73360.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05230.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05230.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05230.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05230.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05250.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05250.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0828566-01 AT5G08330.1 21798944
AT4G15700.1 Os03t0422702-00 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G107300.1 Wheat cytosol 85.58 86.41
TraesCS5B01G101000.1 Wheat cytosol 84.62 85.44
TraesCS5A01G094500.1 Wheat cytosol 84.62 84.62
TraesCS5B01G100600.1 Wheat cytosol 84.62 84.62
TraesCS5D01G106800.1 Wheat cytosol 84.62 84.62
HORVU5Hr1G033140.1 Barley cytosol 84.62 83.81
Zm00001d023869_P001 Maize cytosol 83.65 83.65
TraesCS5A01G094800.1 Wheat cytosol 82.69 83.5
EES16093 Sorghum cytosol 81.73 80.95
EES17138 Sorghum cytosol 79.81 78.3
HORVU5Hr1G025690.1 Barley cytosol 83.65 77.68
Zm00001d023872_P001 Maize cytosol, mitochondrion 73.08 72.38
Os11t0655900-01 Rice extracellular 72.12 69.44
Os12t0538600-00 Rice cytosol, extracellular 66.35 66.99
GSMUA_Achr8P09970_001 Banana cytosol 64.42 65.05
HORVU5Hr1G025560.1 Barley cytosol 84.62 64.71
Os01t0368900-01 Rice cytosol 63.46 64.08
GSMUA_Achr11P... Banana cytosol, extracellular 62.5 63.11
Os11t0656700-00 Rice cytosol, plastid 64.42 61.47
Os11t0656400-00 Rice cytosol, plastid 63.46 60.55
KRH50911 Soybean cytosol 58.65 59.8
Os11t0656000-00 Rice cytosol, plastid 62.5 59.63
KRH02215 Soybean cytosol 57.69 58.82
VIT_05s0020g01760.t01 Wine grape cytosol 57.69 58.82
Os01t0936000-00 Rice cytosol 70.19 58.4
VIT_05s0020g01750.t01 Wine grape cytosol 57.69 58.25
PGSC0003DMT400058374 Potato cytosol 56.73 57.84
Solyc01g067440.2.1 Tomato cytosol 56.73 57.84
Solyc01g067460.1.1 Tomato cytosol 56.73 57.84
AT2G47870.1 Thale cress cytosol 56.73 57.28
HORVU0Hr1G010190.2 Barley cytosol 57.69 57.14
KRH11237 Soybean cytosol 55.77 56.86
PGSC0003DMT400058325 Potato cytosol 55.77 56.86
KRH11238 Soybean cytosol 54.81 55.88
KRH21035 Soybean cytosol 54.81 55.88
KRH21036 Soybean cytosol 54.81 55.88
KRH31918 Soybean cytosol 54.81 55.88
KRH71537 Soybean cytosol 54.81 55.88
KRG96386 Soybean cytosol 53.85 55.45
KRH68125 Soybean cytosol 53.85 55.45
KRH71536 Soybean extracellular 53.85 55.45
Bra023688.1-P Field mustard cytosol 53.85 54.9
CDY68328 Canola cytosol 53.85 54.9
KRH50912 Soybean cytosol 53.85 54.9
CDY53023 Canola cytosol 53.85 54.37
AT4G15690.1 Thale cress cytosol 52.88 53.92
AT4G15700.1 Thale cress cytosol 52.88 53.92
Bra002171.1-P Field mustard cytosol 52.88 53.92
Bra006467.1-P Field mustard cytosol 52.88 53.92
CDX70828 Canola cytosol 52.88 53.92
CDX88929 Canola cytosol 52.88 53.92
CDX92597 Canola cytosol 52.88 53.92
CDY02610 Canola cytosol 52.88 53.92
CDY13904 Canola cytosol 52.88 53.92
Solyc06g008750.1.1 Tomato cytosol 52.88 53.92
VIT_07s0104g01390.t01 Wine grape plasma membrane 52.88 53.92
PGSC0003DMT400079099 Potato cytosol 50.0 53.61
Bra031540.1-P Field mustard cytosol 50.96 53.54
CDY06230 Canola cytosol 50.96 53.54
CDY09953 Canola cytosol 50.96 53.54
Os05t0149950-00 Rice cytosol, mitochondrion 58.65 53.51
KRH31919 Soybean cytosol, plasma membrane 51.92 53.47
Bra004426.1-P Field mustard cytosol 52.88 53.4
CDX80138 Canola cytosol 52.88 53.4
Solyc06g054570.1.1 Tomato cytosol 52.88 53.4
CDY32430 Canola cytosol, plastid 51.92 52.94
KRG96387 Soybean cytosol 51.92 52.94
KRH68127 Soybean cytosol 51.92 52.94
PGSC0003DMT400013649 Potato cytosol 51.92 52.94
VIT_07s0104g01400.t01 Wine grape cytosol 51.92 52.94
AT1G06830.1 Thale cress cytosol 50.0 52.53
AT3G62950.1 Thale cress cytosol 51.92 52.43
Bra014380.1-P Field mustard cytosol 51.92 52.43
CDX89161 Canola cytosol 51.92 52.43
AT2G30540.1 Thale cress cytosol 50.96 51.96
AT2G47880.1 Thale cress cytosol 50.96 51.96
AT3G21460.1 Thale cress mitochondrion 50.96 51.96
AT4G15660.1 Thale cress cytosol, extracellular 50.96 51.96
Bra001830.1-P Field mustard cytosol, plastid 50.96 51.96
Bra033503.1-P Field mustard cytosol 50.96 51.96
CDY48890 Canola cytosol, plastid 50.96 51.96
CDY52638 Canola cytosol 50.96 51.96
CDY66333 Canola cytosol 50.96 51.96
CDY10229 Canola cytosol 49.04 51.52
CDY54881 Canola cytosol 49.04 51.52
Solyc06g008760.1.1 Tomato cytosol 50.0 51.49
AT3G62960.1 Thale cress cytosol 50.0 50.98
AT4G15670.1 Thale cress cytosol 50.0 50.98
AT4G15680.1 Thale cress cytosol 50.0 50.98
AT5G18600.1 Thale cress cytosol 50.0 50.98
Bra001831.1-P Field mustard cytosol 50.0 50.98
Bra007718.1-P Field mustard cytosol 50.0 50.98
Bra018307.1-P Field mustard cytosol 50.0 50.98
Bra021641.1-P Field mustard cytosol 50.0 50.98
Bra023883.1-P Field mustard cytosol, plastid 50.0 50.98
Bra033501.1-P Field mustard cytosol 50.0 50.98
CDX76678 Canola cytosol 50.0 50.98
CDY10745 Canola cytosol 50.0 50.98
CDY11466 Canola cytosol 50.0 50.98
CDY19270 Canola cytosol, plastid 50.0 50.98
CDY23990 Canola cytosol 50.0 50.98
CDY29666 Canola cytosol 50.0 50.98
CDY32431 Canola cytosol 50.0 50.98
CDY37292 Canola cytosol, plastid 50.0 50.98
CDY48891 Canola cytosol 50.0 50.98
CDY54294 Canola cytosol 50.0 50.98
PGSC0003DMT400029525 Potato cytosol 50.0 50.98
PGSC0003DMT400029596 Potato cytosol 50.0 50.98
Solyc09g074590.1.1 Tomato cytosol 50.0 50.98
CDX76677 Canola cytosol 50.0 50.49
CDY11464 Canola cytosol 50.0 50.49
CDY11465 Canola cytosol 50.0 50.49
CDY27469 Canola cytosol 50.96 50.48
Bra004424.1-P Field mustard cytosol 49.04 50.0
Bra012773.1-P Field mustard cytosol 49.04 50.0
Bra014379.1-P Field mustard cytosol 49.04 50.0
Bra033504.1-P Field mustard cytosol 46.15 50.0
Bra038075.1-P Field mustard cytosol 49.04 50.0
CDX80139 Canola cytosol 49.04 50.0
CDX84825 Canola cytosol 49.04 50.0
CDX89162 Canola cytosol 49.04 50.0
CDX90576 Canola cytosol 49.04 50.0
CDX95739 Canola cytosol 49.04 50.0
CDX97824 Canola cytosol 49.04 50.0
CDY09747 Canola cytosol 49.04 50.0
CDY22746 Canola cytosol 49.04 50.0
CDY53024 Canola cytosol 49.04 50.0
CDY66332 Canola cytosol 49.04 50.0
CDY68061 Canola cytosol 49.04 50.0
PGSC0003DMT400029597 Potato cytosol 49.04 50.0
Solyc09g074580.1.1 Tomato cytosol 49.04 50.0
Solyc09g074600.1.1 Tomato cytosol 49.04 50.0
CDY55528 Canola cytosol 50.0 49.52
PGSC0003DMT400042706 Potato cytosol 49.04 49.51
Bra038076.1-P Field mustard cytosol, extracellular 48.08 49.51
CDY09078 Canola cytosol, extracellular 48.08 49.51
CDY22745 Canola cytosol, extracellular 48.08 49.51
Bra007717.1-P Field mustard cytosol 36.54 49.35
CDY09079 Canola cytosol 48.08 49.02
Bra021444.1-P Field mustard cytosol 49.04 48.57
CDY69190 Canola cytosol 48.08 48.08
Bra003517.1-P Field mustard cytosol, extracellular 47.12 48.04
CDY54296 Canola cytosol 47.12 48.04
Bra033499.1-P Field mustard cytosol 45.19 47.96
PGSC0003DMT400041380 Potato cytosol, plastid 46.15 47.06
PGSC0003DMT400041381 Potato cytosol, plastid 46.15 47.06
Os04t0393500-01 Rice cytosol 59.62 45.93
Bra032563.1-P Field mustard cytosol 44.23 45.1
CDY32493 Canola cytosol 44.23 45.1
Solyc04g011790.1.1 Tomato cytosol, plastid 44.23 45.1
Solyc04g011830.1.1 Tomato cytosol, plastid 44.23 45.1
Solyc04g011870.1.1 Tomato cytosol, plastid 44.23 45.1
PGSC0003DMT400027953 Potato cytosol, plastid 43.27 44.55
Os02t0512400-01 Rice cytosol 57.69 44.44
VIT_07s0104g01420.t01 Wine grape cytosol 45.19 44.34
PGSC0003DMT400041379 Potato cytosol, plastid 40.38 44.21
Solyc04g011820.1.1 Tomato cytosol 40.38 44.21
AT1G03020.1 Thale cress cytosol 43.27 44.12
Bra003515.1-P Field mustard cytosol 43.27 44.12
Bra033366.1-P Field mustard cytosol 43.27 44.12
CDX67910 Canola cytosol 43.27 44.12
CDX89921 Canola cytosol 43.27 44.12
PGSC0003DMT400027946 Potato cytosol, plastid 43.27 44.12
PGSC0003DMT400027948 Potato cytosol, plastid 43.27 44.12
PGSC0003DMT400027951 Potato cytosol, plastid 43.27 44.12
PGSC0003DMT400041378 Potato cytosol, plastid 43.27 44.12
PGSC0003DMT400041382 Potato cytosol 43.27 44.12
Solyc04g011810.1.1 Tomato cytosol, plastid 43.27 44.12
Solyc04g011840.1.1 Tomato cytosol 43.27 44.12
CDY18141 Canola cytosol 42.31 43.14
KRH68129 Soybean cytosol 42.31 43.14
PGSC0003DMT400027949 Potato cytosol, plastid 42.31 43.14
PGSC0003DMT400027950 Potato cytosol, plastid 42.31 43.14
PGSC0003DMT400027954 Potato cytosol, plastid 42.31 43.14
Solyc04g011800.1.1 Tomato cytosol, plastid 42.31 43.14
Solyc04g011850.1.1 Tomato cytosol 42.31 43.14
Solyc04g011860.1.1 Tomato cytosol, plastid 42.31 43.14
PGSC0003DMT400029673 Potato cytosol 43.27 42.45
AT3G62930.1 Thale cress cytosol 41.35 42.16
Bra014382.1-P Field mustard cytosol 41.35 42.16
CDX89159 Canola cytosol 41.35 42.16
CDX93949 Canola cytosol 41.35 42.16
CDY25124 Canola cytosol 41.35 42.16
KRG96389 Soybean cytosol 41.35 42.16
PGSC0003DMT400027947 Potato cytosol, plastid 41.35 42.16
Solyc04g011880.1.1 Tomato cytosol, plastid 41.35 42.16
Solyc04g053110.1.1 Tomato cytosol 41.35 42.16
PGSC0003DMT400027952 Potato cytosol 38.46 42.11
KRH68130 Soybean cytosol, plastid 42.31 41.9
PGSC0003DMT400077394 Potato cytosol 41.35 41.35
Solyc05g051720.1.1 Tomato cytosol 41.35 41.35
KRH31917 Soybean cytosol 40.38 41.18
PGSC0003DMT400042707 Potato cytosol 40.38 41.18
Solyc04g011780.1.1 Tomato extracellular 40.38 41.18
KRH31916 Soybean cytosol 37.5 41.05
Bra007714.1-P Field mustard cytosol 39.42 40.2
CDX76675 Canola cytosol 39.42 40.2
CDY11462 Canola cytosol 39.42 40.2
KRH71538 Soybean cytosol 39.42 40.2
KRG96390 Soybean cytosol, plastid 40.38 40.0
PGSC0003DMT400077393 Potato cytosol 39.42 39.81
Solyc05g051730.1.1 Tomato cytosol 39.42 39.81
Solyc09g074570.1.1 Tomato cytosol 40.38 39.62
KRH31915 Soybean cytosol, plastid 38.46 38.1
Bra015532.1-P Field mustard cytosol 43.27 31.03
CDY71728 Canola cytosol 41.35 30.28
CDX97821 Canola mitochondrion 36.54 28.57
Os07t0151100-01 Rice cytosol 48.08 26.04
PGSC0003DMT400013650 Potato cytosol 38.46 13.56
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EntrezGene:4352426ProteinID:ABA99337.1EMBL:AK063610ProteinID:BAF29962.1
ProteinID:BAT17478.1ProteinID:EAZ20752.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114
InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109EnsemblPlantsGene:Os12g0538700EnsemblPlants:Os12t0538700-01
PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF83UniProt:Q2QP86
SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0000680EE7RefSeq:XP_015619487.1:
Description
GLUTAREDOXIN 29Similar to AT.I.24-1 protein (Fragment). (Os12t0538700-01)
Coordinates
chr12:+:21480112..21481099
Molecular Weight (calculated)
11174.9 Da
IEP (calculated)
9.544
GRAVY (calculated)
0.278
Length
104 amino acids
Sequence
(BLAST)
001: MERVAKLSTE KAVVIFTASN CPMCHTVVSL FSDLGVGAAV HELDRDPLHG RDMERDLARR LGRSPPVPAV FIAGKLVGST DRVMSLHLAG KLVPMLKAAG
101: AIWL
Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)
001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL
Arabidopsis Description
GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.