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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • mitochondrion 2
  • cytosol 2
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000476.1-P
Bra011357.1-P
Bra025315.1-P
Bra039514.1-P
Bra040086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Bra000476.1-P AT2G29310.1 21798944
AT2G30540.1 Bra039514.1-P AT2G29310.1 21798944
AT2G30540.1 Bra025315.1-P AT3G27960.1 21798944
AT2G30540.1 Bra011357.1-P AT4G32570.1 21798944
AT2G30540.1 Bra040086.1-P AT4G32570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10745 Canola cytosol 100.0 100.0
Bra021641.1-P Field mustard cytosol 97.06 97.06
AT2G30540.1 Thale cress cytosol 95.1 95.1
Bra031540.1-P Field mustard cytosol 81.37 83.84
Bra004424.1-P Field mustard cytosol 77.45 77.45
Bra007718.1-P Field mustard cytosol 75.49 75.49
Bra014379.1-P Field mustard cytosol 75.49 75.49
Bra003517.1-P Field mustard cytosol, extracellular 74.51 74.51
Bra021444.1-P Field mustard cytosol 76.47 74.29
VIT_07s0104g01390.t01 Wine grape plasma membrane 73.53 73.53
KRH31919 Soybean cytosol, plasma membrane 68.63 69.31
KRG96386 Soybean cytosol 67.65 68.32
KRH68125 Soybean cytosol 66.67 67.33
KRH71536 Soybean extracellular 65.69 66.34
Solyc06g008760.1.1 Tomato cytosol 60.78 61.39
PGSC0003DMT400029673 Potato cytosol 60.78 58.49
Solyc09g074570.1.1 Tomato cytosol 59.8 57.55
Os01t0368900-01 Rice cytosol 56.86 56.31
Zm00001d040837_P001 Maize cytosol 56.86 56.31
EES00746 Sorghum cytosol 55.88 55.34
GSMUA_Achr11P... Banana cytosol, extracellular 55.88 55.34
Bra023688.1-P Field mustard cytosol 54.9 54.9
GSMUA_Achr11P... Banana cytosol 54.9 54.37
TraesCS5B01G100900.1 Wheat cytosol 54.9 54.37
TraesCS5B01G049000.1 Wheat cytosol 45.1 53.49
TraesCS5A01G094700.1 Wheat cytosol 53.92 53.4
TraesCS5B01G101100.1 Wheat cytosol, extracellular 53.92 53.4
TraesCS5D01G107200.1 Wheat cytosol 53.92 53.4
Zm00001d040836_P001 Maize cytosol 53.92 53.4
Bra002171.1-P Field mustard cytosol 52.94 52.94
Bra033503.1-P Field mustard cytosol 52.94 52.94
Zm00001d027695_P001 Maize cytosol 53.92 52.88
EES00745 Sorghum cytosol 52.94 52.43
GSMUA_Achr1P26720_001 Banana cytosol 52.94 52.43
TraesCS5A01G094900.1 Wheat extracellular 52.94 52.43
TraesCS5B01G101600.1 Wheat cytosol, extracellular 52.94 52.43
TraesCS5D01G107300.1 Wheat cytosol 52.94 52.43
TraesCS5D01G107500.1 Wheat cytosol, extracellular 52.94 52.43
TraesCS5D01G108100.1 Wheat cytosol, extracellular 52.94 52.43
Bra001831.1-P Field mustard cytosol 51.96 51.96
Bra006467.1-P Field mustard cytosol 51.96 51.96
Bra023883.1-P Field mustard cytosol, plastid 51.96 51.96
Bra033501.1-P Field mustard cytosol 51.96 51.96
TraesCS5A01G094500.1 Wheat cytosol 52.94 51.92
TraesCS5B01G100600.1 Wheat cytosol 52.94 51.92
TraesCS5D01G106800.1 Wheat cytosol 52.94 51.92
Bra015532.1-P Field mustard cytosol 73.53 51.72
GSMUA_Achr5P00380_001 Banana extracellular 51.96 51.46
GSMUA_Achr8P33660_001 Banana cytosol 51.96 51.46
GSMUA_AchrUn_... Banana cytosol, extracellular 51.96 51.46
HORVU5Hr1G010960.1 Barley cytosol 51.96 51.46
HORVU5Hr1G025680.1 Barley cytosol 51.96 51.46
HORVU5Hr1G025710.1 Barley cytosol, extracellular 51.96 51.46
TraesCS5A01G044700.1 Wheat cytosol 51.96 51.46
TraesCS5A01G044900.1 Wheat cytosol 51.96 51.46
TraesCS5A01G095500.1 Wheat cytosol 51.96 51.46
TraesCS5B01G048900.1 Wheat cytosol 51.96 51.46
TraesCS5B01G101000.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054000.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054200.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054800.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054900.1 Wheat cytosol 51.96 51.46
TraesCS5D01G055000.1 Wheat cytosol 51.96 51.46
HORVU5Hr1G033140.1 Barley cytosol 52.94 51.43
Bra038076.1-P Field mustard cytosol, extracellular 50.0 50.49
GSMUA_Achr5P00370_001 Banana cytosol 50.98 50.49
GSMUA_Achr7P03690_001 Banana cytosol 50.98 50.49
Os12t0538600-00 Rice cytosol, extracellular 50.98 50.49
TraesCS5A01G044100.1 Wheat cytosol 50.98 50.49
TraesCS5A01G045000.1 Wheat cytosol 50.98 50.49
TraesCS5A01G094800.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048300.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048400.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048600.1 Wheat cytosol 50.98 50.49
TraesCS5B01G049100.1 Wheat cytosol 50.98 50.49
TraesCS5B01G049200.1 Wheat cytosol 50.98 50.49
Bra012773.1-P Field mustard cytosol 50.0 50.0
Bra033499.1-P Field mustard cytosol 48.04 50.0
Bra033504.1-P Field mustard cytosol 47.06 50.0
Os12t0538700-01 Rice cytosol 50.98 50.0
EES02025 Sorghum cytosol 51.96 49.53
GSMUA_Achr8P09970_001 Banana cytosol 50.0 49.51
HORVU5Hr1G010870.1 Barley cytosol 50.0 49.51
TraesCS5A01G044400.1 Wheat cytosol 50.0 49.51
TraesCS5A01G044800.1 Wheat cytosol 50.0 49.51
TraesCS5D01G054400.1 Wheat cytosol 50.0 49.51
TraesCS5D01G055100.1 Wheat cytosol 50.0 49.51
HORVU5Hr1G025610.1 Barley cytosol 50.0 49.04
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 50.0 49.04
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 50.0 49.04
Bra001830.1-P Field mustard cytosol, plastid 49.02 49.02
Bra038075.1-P Field mustard cytosol 49.02 49.02
GSMUA_Achr11P... Banana cytosol, extracellular 49.02 48.54
HORVU5Hr1G025690.1 Barley cytosol 52.94 48.21
TraesCS3A01G462200.1 Wheat cytosol 49.02 48.08
TraesCS3A01G463000.1 Wheat cytosol 49.02 48.08
TraesCS3B01G504700.1 Wheat cytosol 49.02 48.08
TraesCS3D01G456900.1 Wheat cytosol 49.02 48.08
TraesCS5A01G094600.1 Wheat cytosol 49.02 48.08
TraesCS5B01G100700.1 Wheat cytosol 49.02 48.08
Zm00001d023869_P001 Maize cytosol 49.02 48.08
Zm00001d023873_P001 Maize cytosol 49.02 48.08
Zm00001d023872_P001 Maize cytosol, mitochondrion 49.02 47.62
TraesCS3B01G506200.1 Wheat cytosol 48.04 47.12
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 48.04 47.12
TraesCS5D01G106900.1 Wheat cytosol 48.04 47.12
Zm00001d023870_P001 Maize cytosol, extracellular 48.04 47.12
Bra007717.1-P Field mustard cytosol 35.29 46.75
EES16092 Sorghum cytosol 48.04 46.67
EES16093 Sorghum cytosol 48.04 46.67
HORVU5Hr1G010950.1 Barley cytosol 47.06 46.6
HORVU3Hr1G099090.1 Barley cytosol 47.06 46.15
TraesCS3A01G463200.1 Wheat cytosol 47.06 46.15
TraesCS3B01G505300.1 Wheat cytosol 47.06 46.15
TraesCS3B01G506500.1 Wheat cytosol 47.06 46.15
TraesCS4D01G147300.1 Wheat cytosol 47.06 46.15
Zm00001d042187_P001 Maize cytosol 50.0 45.95
Os11t0656000-00 Rice cytosol, plastid 49.02 45.87
EES17138 Sorghum cytosol 47.06 45.28
TraesCS3B01G506400.1 Wheat cytosol 46.08 45.19
TraesCS3D01G457200.1 Wheat cytosol 46.08 45.19
Bra014380.1-P Field mustard cytosol 45.1 44.66
HORVU3Hr1G099150.1 Barley cytosol, extracellular 28.43 44.62
TraesCS3A01G462900.1 Wheat cytosol, extracellular 45.1 44.23
Os11t0656700-00 Rice cytosol, plastid 47.06 44.04
OQU79243 Sorghum cytosol 46.08 43.93
HORVU3Hr1G099050.2 Barley cytosol 46.08 43.52
Os11t0655900-01 Rice extracellular 46.08 43.52
Zm00001d048720_P001 Maize cytosol 47.06 43.24
EES16097 Sorghum cytosol 45.1 42.99
Os05t0149950-00 Rice cytosol, mitochondrion 48.04 42.98
Os11t0656400-00 Rice cytosol, plastid 45.1 42.2
EES16096 Sorghum cytosol 43.14 41.9
Zm00001d048719_P001 Maize cytosol 45.1 41.82
Bra004426.1-P Field mustard cytosol 42.16 41.75
TraesCS3A01G462800.1 Wheat extracellular 33.33 41.46
Bra007714.1-P Field mustard cytosol 41.18 41.18
Bra014382.1-P Field mustard cytosol 41.18 41.18
EES08918 Sorghum cytosol, plastid 42.16 40.95
TraesCS3B01G506000.1 Wheat mitochondrion 32.35 40.24
Bra003515.1-P Field mustard cytosol 40.2 40.2
Os01t0936000-00 Rice cytosol 49.02 40.0
HORVU5Hr1G025560.1 Barley cytosol 52.94 39.71
EES08919 Sorghum cytosol 42.16 39.45
Bra032563.1-P Field mustard cytosol 39.22 39.22
Bra033366.1-P Field mustard cytosol 39.22 39.22
Bra006236.1-P Field mustard cytosol 47.06 35.29
Bra023448.1-P Field mustard cytosol 47.06 35.04
Bra000980.1-P Field mustard cytosol 46.08 34.31
Bra008782.1-P Field mustard cytosol 44.12 33.58
HORVU0Hr1G010190.2 Barley cytosol 32.35 31.43
PGSC0003DMT400013650 Potato cytosol 49.02 16.95
Protein Annotations
MapMan:18.8.2MapMan:25.1.1.3Gene3D:3.40.30.10EnsemblPlantsGene:Bra018307EnsemblPlants:Bra018307.1EnsemblPlants:Bra018307.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900
GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:IPR002109UniProt:M4DP67
PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF57SUPFAM:SSF52833TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI0002547ACA::::
Description
AT2G30540 (E=6e-053) | glutaredoxin family protein
Coordinates
chrA05:+:7340695..7341003
Molecular Weight (calculated)
11114.7 Da
IEP (calculated)
6.748
GRAVY (calculated)
0.223
Length
102 amino acids
Sequence
(BLAST)
001: MDKVVRMSSD KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPDCR EIEKALMRLG CSTPVPAIFV DGKLVGSTNE VMSMHLSGSL VPLVKPFQAN
101: LC
Best Arabidopsis Sequence Match ( AT2G30540.1 )
(BLAST)
001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPECR EIEKALMRLG CSTPVPAIFV GGKLIGSTNE VMSLHLSGSL VPLVKPFQAN
101: LC
Arabidopsis Description
GRXS9Monothiol glutaredoxin-S9 [Source:UniProtKB/Swiss-Prot;Acc:O04341]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.