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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • mitochondrion 1
  • extracellular 3
  • plastid 1
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G001860.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU6Hr1G069310.1
HORVU6Hr1G093960.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 HORVU6Hr1G069310.1 AT3G27960.1 21798944
AT4G15700.1 HORVU0Hr1G018470.1 AT1G22920.1 21798944
AT4G15700.1 HORVU0Hr1G025410.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G008160.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G056160.5 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G067660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU2Hr1G112000.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G021300.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G054660.1 AT1G22920.1 21798944
AT4G15700.1 HORVU3Hr1G113750.1 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G047410.2 AT1G22920.1 21798944
AT4G15700.1 HORVU4Hr1G048730.1 AT1G22920.1 21798944
AT4G15700.1 HORVU6Hr1G023630.1 AT1G22920.1 21798944
AT4G15700.1 HORVU7Hr1G078010.1 AT1G22920.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05230.1 21798944
AT4G15700.1 HORVU1Hr1G001860.1 AT2G05250.1 21798944
AT4G15700.1 HORVU6Hr1G093960.1 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G101600.1 Wheat cytosol, extracellular 98.06 98.06
TraesCS5D01G108100.1 Wheat cytosol, extracellular 98.06 98.06
TraesCS5A01G094900.1 Wheat extracellular 97.09 97.09
TraesCS5D01G107500.1 Wheat cytosol, extracellular 97.09 97.09
TraesCS5B01G101100.1 Wheat cytosol, extracellular 96.12 96.12
TraesCS5A01G095500.1 Wheat cytosol 95.15 95.15
HORVU5Hr1G025610.1 Barley cytosol 89.32 88.46
Zm00001d023873_P001 Maize cytosol 85.44 84.62
HORVU5Hr1G025680.1 Barley cytosol 83.5 83.5
EES16092 Sorghum cytosol 83.5 81.9
Zm00001d023870_P001 Maize cytosol, extracellular 81.55 80.77
OQU79243 Sorghum cytosol 80.58 77.57
EES16097 Sorghum cytosol 79.61 76.64
GSMUA_Achr5P00380_001 Banana extracellular 73.79 73.79
GSMUA_Achr11P... Banana cytosol, extracellular 71.84 71.84
GSMUA_Achr11P... Banana cytosol 69.9 69.9
GSMUA_Achr1P26720_001 Banana cytosol 67.96 67.96
GSMUA_Achr5P00370_001 Banana cytosol 67.96 67.96
HORVU5Hr1G010960.1 Barley cytosol 66.99 66.99
HORVU5Hr1G010870.1 Barley cytosol 66.02 66.02
EES16096 Sorghum cytosol 66.99 65.71
KRH11237 Soybean cytosol 65.05 65.69
KRH21036 Soybean cytosol 65.05 65.69
GSMUA_AchrUn_... Banana cytosol, extracellular 65.05 65.05
HORVU5Hr1G010950.1 Barley cytosol 64.08 64.08
KRH02215 Soybean cytosol 63.11 63.73
GSMUA_Achr8P33660_001 Banana cytosol 63.11 63.11
VIT_05s0020g01760.t01 Wine grape cytosol 62.14 62.75
HORVU3Hr1G099090.1 Barley cytosol 63.11 62.5
GSMUA_Achr7P03690_001 Banana cytosol 62.14 62.14
HORVU5Hr1G033140.1 Barley cytosol 63.11 61.9
Bra023688.1-P Field mustard cytosol 61.16 61.76
KRH50911 Soybean cytosol 61.16 61.76
KRG96386 Soybean cytosol 60.19 61.39
VIT_05s0020g01750.t01 Wine grape cytosol 61.16 61.16
AT4G15700.1 Thale cress cytosol 60.19 60.78
AT5G18600.1 Thale cress cytosol 60.19 60.78
Bra006467.1-P Field mustard cytosol 60.19 60.78
Bra033503.1-P Field mustard cytosol 60.19 60.78
CDX70828 Canola cytosol 60.19 60.78
CDX88929 Canola cytosol 60.19 60.78
CDY02610 Canola cytosol 60.19 60.78
CDY66333 Canola cytosol 60.19 60.78
CDY68328 Canola cytosol 60.19 60.78
KRH11238 Soybean cytosol 60.19 60.78
KRH50912 Soybean cytosol 60.19 60.78
KRH68125 Soybean cytosol 59.22 60.4
HORVU3Hr1G099150.1 Barley cytosol, extracellular 37.86 60.0
AT4G15680.1 Thale cress cytosol 59.22 59.8
Bra002171.1-P Field mustard cytosol 59.22 59.8
CDX92597 Canola cytosol 59.22 59.8
CDY13904 Canola cytosol 59.22 59.8
KRH21035 Soybean cytosol 59.22 59.8
Solyc01g067460.1.1 Tomato cytosol 59.22 59.8
VIT_07s0104g01390.t01 Wine grape plasma membrane 59.22 59.8
HORVU5Hr1G025690.1 Barley cytosol 64.08 58.93
AT4G15660.1 Thale cress cytosol, extracellular 58.25 58.82
Bra033501.1-P Field mustard cytosol 58.25 58.82
PGSC0003DMT400058374 Potato cytosol 58.25 58.82
AT4G15670.1 Thale cress cytosol 57.28 57.84
AT4G15690.1 Thale cress cytosol 57.28 57.84
PGSC0003DMT400058325 Potato cytosol 57.28 57.84
Solyc01g067440.2.1 Tomato cytosol 57.28 57.84
KRH71536 Soybean extracellular 56.31 57.43
HORVU3Hr1G099050.2 Barley cytosol 60.19 57.41
Bra033504.1-P Field mustard cytosol 53.4 57.29
Bra012773.1-P Field mustard cytosol 56.31 56.86
CDX90576 Canola cytosol 56.31 56.86
CDY09747 Canola cytosol 56.31 56.86
CDY22746 Canola cytosol 56.31 56.86
AT1G06830.1 Thale cress cytosol 54.37 56.57
Bra031540.1-P Field mustard cytosol 54.37 56.57
CDY06230 Canola cytosol 54.37 56.57
CDY09953 Canola cytosol 54.37 56.57
KRH31919 Soybean cytosol, plasma membrane 55.34 56.44
Bra038075.1-P Field mustard cytosol 55.34 55.88
CDY66332 Canola cytosol 55.34 55.88
KRG96387 Soybean cytosol 55.34 55.88
KRH68127 Soybean cytosol 55.34 55.88
CDY10229 Canola cytosol 53.4 55.56
Bra038076.1-P Field mustard cytosol, extracellular 54.37 55.45
CDY09078 Canola cytosol, extracellular 54.37 55.45
CDY22745 Canola cytosol, extracellular 54.37 55.45
AT3G21460.1 Thale cress mitochondrion 54.37 54.9
Bra004424.1-P Field mustard cytosol 54.37 54.9
CDX80139 Canola cytosol 54.37 54.9
CDY09079 Canola cytosol 54.37 54.9
CDY32430 Canola cytosol, plastid 54.37 54.9
CDY53024 Canola cytosol 54.37 54.9
CDY54294 Canola cytosol 54.37 54.9
CDY54296 Canola cytosol 54.37 54.9
KRH31918 Soybean cytosol 54.37 54.9
KRH71537 Soybean cytosol 54.37 54.9
PGSC0003DMT400029525 Potato cytosol 54.37 54.9
PGSC0003DMT400029596 Potato cytosol 54.37 54.9
PGSC0003DMT400041381 Potato cytosol, plastid 54.37 54.9
Solyc06g008750.1.1 Tomato cytosol 54.37 54.9
Bra033499.1-P Field mustard cytosol 51.46 54.08
Bra001830.1-P Field mustard cytosol, plastid 53.4 53.92
Bra001831.1-P Field mustard cytosol 53.4 53.92
CDY32431 Canola cytosol 53.4 53.92
CDY48890 Canola cytosol, plastid 53.4 53.92
CDY48891 Canola cytosol 53.4 53.92
PGSC0003DMT400013649 Potato cytosol 53.4 53.92
PGSC0003DMT400029597 Potato cytosol 53.4 53.92
Solyc09g074580.1.1 Tomato cytosol 53.4 53.92
Solyc09g074590.1.1 Tomato cytosol 53.4 53.92
Solyc09g074600.1.1 Tomato cytosol 53.4 53.92
VIT_07s0104g01400.t01 Wine grape cytosol 53.4 53.92
CDY54881 Canola cytosol 51.46 53.54
CDY27469 Canola cytosol 54.37 53.33
AT2G47880.1 Thale cress cytosol 52.43 52.94
Bra021641.1-P Field mustard cytosol 52.43 52.94
CDY23990 Canola cytosol 52.43 52.94
CDY29666 Canola cytosol 52.43 52.94
CDY52638 Canola cytosol 52.43 52.94
Solyc04g011790.1.1 Tomato cytosol, plastid 52.43 52.94
CDY69190 Canola cytosol 53.4 52.88
PGSC0003DMT400041379 Potato cytosol, plastid 48.54 52.63
AT2G47870.1 Thale cress cytosol 52.43 52.43
CDY55528 Canola cytosol 53.4 52.38
AT2G30540.1 Thale cress cytosol 51.46 51.96
Bra018307.1-P Field mustard cytosol 51.46 51.96
Bra023883.1-P Field mustard cytosol, plastid 51.46 51.96
CDX84825 Canola cytosol 51.46 51.96
CDX95739 Canola cytosol 51.46 51.96
CDY10745 Canola cytosol 51.46 51.96
CDY19270 Canola cytosol, plastid 51.46 51.96
CDY37292 Canola cytosol, plastid 51.46 51.96
PGSC0003DMT400041380 Potato cytosol, plastid 51.46 51.96
Solyc04g011830.1.1 Tomato cytosol, plastid 51.46 51.96
Solyc04g011870.1.1 Tomato cytosol, plastid 51.46 51.96
Solyc04g011820.1.1 Tomato cytosol 47.57 51.58
Solyc06g008760.1.1 Tomato cytosol 50.49 51.49
Bra004426.1-P Field mustard cytosol 51.46 51.46
CDX80138 Canola cytosol 51.46 51.46
PGSC0003DMT400042706 Potato cytosol 51.46 51.46
Solyc06g054570.1.1 Tomato cytosol 51.46 51.46
Bra021444.1-P Field mustard cytosol 52.43 51.43
AT3G62960.1 Thale cress cytosol 50.49 50.98
Bra007718.1-P Field mustard cytosol 50.49 50.98
CDX76678 Canola cytosol 50.49 50.98
CDX97824 Canola cytosol 50.49 50.98
CDY11466 Canola cytosol 50.49 50.98
PGSC0003DMT400027946 Potato cytosol, plastid 50.49 50.98
PGSC0003DMT400041382 Potato cytosol 50.49 50.98
Solyc04g011850.1.1 Tomato cytosol 50.49 50.98
PGSC0003DMT400079099 Potato cytosol 47.57 50.52
CDY53023 Canola cytosol 50.49 50.49
Bra014379.1-P Field mustard cytosol 49.51 50.0
CDX89162 Canola cytosol 49.51 50.0
CDY68061 Canola cytosol 49.51 50.0
HORVU0Hr1G003840.1 Barley extracellular 65.05 50.0
PGSC0003DMT400027948 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027949 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027950 Potato cytosol, plastid 49.51 50.0
PGSC0003DMT400027951 Potato cytosol, plastid 49.51 50.0
Solyc04g011810.1.1 Tomato cytosol, plastid 49.51 50.0
Solyc04g011860.1.1 Tomato cytosol, plastid 49.51 50.0
PGSC0003DMT400027952 Potato cytosol 45.63 49.47
Bra007717.1-P Field mustard cytosol 36.89 49.35
Bra003517.1-P Field mustard cytosol, extracellular 48.54 49.02
KRH31917 Soybean cytosol 48.54 49.02
PGSC0003DMT400027947 Potato cytosol, plastid 48.54 49.02
PGSC0003DMT400027954 Potato cytosol, plastid 48.54 49.02
Solyc04g011800.1.1 Tomato cytosol, plastid 48.54 49.02
Solyc04g011840.1.1 Tomato cytosol 48.54 49.02
AT3G62950.1 Thale cress cytosol 48.54 48.54
Bra014380.1-P Field mustard cytosol 48.54 48.54
CDX89161 Canola cytosol 48.54 48.54
PGSC0003DMT400027953 Potato cytosol, plastid 47.57 48.51
Bra014382.1-P Field mustard cytosol 47.57 48.04
CDX89159 Canola cytosol 47.57 48.04
CDX93949 Canola cytosol 47.57 48.04
KRH71538 Soybean cytosol 47.57 48.04
HORVU5Hr1G025560.1 Barley cytosol 63.11 47.79
CDX76677 Canola cytosol 47.57 47.57
CDY11464 Canola cytosol 47.57 47.57
CDY11465 Canola cytosol 47.57 47.57
Solyc05g051730.1.1 Tomato cytosol 47.57 47.57
PGSC0003DMT400077394 Potato cytosol 47.57 47.12
Solyc05g051720.1.1 Tomato cytosol 47.57 47.12
Bra032563.1-P Field mustard cytosol 46.6 47.06
CDY32493 Canola cytosol 46.6 47.06
KRG96389 Soybean cytosol 46.6 47.06
KRH68129 Soybean cytosol 46.6 47.06
PGSC0003DMT400041378 Potato cytosol, plastid 46.6 47.06
Solyc04g011780.1.1 Tomato extracellular 46.6 47.06
Solyc04g011880.1.1 Tomato cytosol, plastid 46.6 47.06
PGSC0003DMT400077393 Potato cytosol 46.6 46.6
VIT_07s0104g01420.t01 Wine grape cytosol 47.57 46.23
AT1G03020.1 Thale cress cytosol 45.63 46.08
AT3G62930.1 Thale cress cytosol 45.63 46.08
CDY18141 Canola cytosol 45.63 46.08
Solyc09g074570.1.1 Tomato cytosol 46.6 45.28
Bra003515.1-P Field mustard cytosol 44.66 45.1
Bra007714.1-P Field mustard cytosol 44.66 45.1
Bra033366.1-P Field mustard cytosol 44.66 45.1
CDX67910 Canola cytosol 44.66 45.1
CDX76675 Canola cytosol 44.66 45.1
CDX89921 Canola cytosol 44.66 45.1
CDY11462 Canola cytosol 44.66 45.1
PGSC0003DMT400029673 Potato cytosol 45.63 44.34
CDY25124 Canola cytosol 43.69 44.12
Solyc04g053110.1.1 Tomato cytosol 43.69 44.12
KRH31916 Soybean cytosol 39.81 43.16
PGSC0003DMT400042707 Potato cytosol 42.72 43.14
HORVU0Hr1G010190.2 Barley cytosol 43.69 42.86
KRH68130 Soybean cytosol, plastid 42.72 41.9
KRG96390 Soybean cytosol, plastid 41.75 40.95
KRH31915 Soybean cytosol, plastid 38.84 38.1
Bra015532.1-P Field mustard cytosol 47.57 33.79
CDY71728 Canola cytosol 42.72 30.99
CDX97821 Canola mitochondrion 36.89 28.57
HORVU2Hr1G060300.1 Barley cytosol 43.69 25.71
PGSC0003DMT400013650 Potato cytosol 39.81 13.9
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EMBL:AK355123UniProt:F2CU21GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114
InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrEnsemblPlantsGene:HORVU5Hr1G025710EnsemblPlants:HORVU5Hr1G025710.1InterPro:IPR002109
PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF98SUPFAM:SSF52833
TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI000200486A:::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CU21]
Coordinates
chrchr5H:-:141755807..141757033
Molecular Weight (calculated)
11208.2 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.356
Length
103 amino acids
Sequence
(BLAST)
001: MDRVMKLASE RAVVIFTLSS CCMCHTVSRL LCDLGVNALV HELDQDPRGK EMERALLKML GKGPSVPVVF IGGKLVGGTN RVMSMHLSGE LVPMLRNAGA
101: LWL
Best Arabidopsis Sequence Match ( AT5G18600.1 )
(BLAST)
001: MDMITKMVME RPVVIYSKSS CCMSHTIKTL LCDFGANPAV YELDEISRGR EIEQALLRLG CSPAVPGVFI GGELVGGANE VMSLHLNGSL IPMLKRAGAL
101: WV
Arabidopsis Description
GRXS2Monothiol glutaredoxin-S2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Z8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.