CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68863
CDX75256
CDX83601
CDX86457
CDX95752
CDY23332
CDY30950
CDY51673
CDY58518

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	CDX95752	AT2G29310.1	21798944
AT2G30540.1	CDX86457	AT3G27960.1	21798944
AT2G30540.1	CDY58518	AT3G27960.1	21798944
AT2G30540.1	CDX68863	AT4G32570.1	21798944
AT2G30540.1	CDX75256	AT4G32570.1	21798944
AT2G30540.1	CDX83601	AT4G32570.1	21798944
AT2G30540.1	CDY23332	AT4G32570.1	21798944
AT2G30540.1	CDY30950	AT4G32570.1	21798944
AT2G30540.1	CDY51673	AT4G32570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97824	Canola	cytosol	51.13	66.67
CDY23990	Canola	cytosol	48.87	63.73
CDX84825	Canola	cytosol	48.12	62.75
CDY10745	Canola	cytosol	48.12	62.75
CDY29666	Canola	cytosol	48.12	62.75
CDY52638	Canola	cytosol	48.12	62.75
AT2G30540.1	Thale cress	cytosol	47.37	61.76
CDY54881	Canola	cytosol	41.35	55.56
CDY06230	Canola	cytosol	40.6	54.55
CDY09953	Canola	cytosol	40.6	54.55
CDX80139	Canola	cytosol	41.35	53.92
CDY53024	Canola	cytosol	41.35	53.92
CDY10229	Canola	cytosol	39.85	53.54
CDY27469	Canola	cytosol	41.35	52.38
CDX95739	Canola	cytosol	39.85	51.96
CDY55528	Canola	cytosol	40.6	51.43
CDX76678	Canola	cytosol	39.1	50.98
CDY11466	Canola	cytosol	39.1	50.98
CDX89162	Canola	cytosol	38.35	50.0
CDY68061	Canola	cytosol	38.35	50.0
VIT_07s0104g01390.t01	Wine grape	plasma membrane	38.35	50.0
KRH68125	Soybean	cytosol	36.09	47.52
KRG96386	Soybean	cytosol	35.34	46.53
KRH31919	Soybean	cytosol, plasma membrane	35.34	46.53
KRH71536	Soybean	extracellular	33.83	44.55
CDY02610	Canola	cytosol	32.33	42.16
CDY68328	Canola	cytosol	32.33	42.16
TraesCS5B01G049000.1	Wheat	cytosol	27.07	41.86
Zm00001d040837_P001	Maize	cytosol	32.33	41.75
EES00746	Sorghum	cytosol	31.58	40.78
Os01t0368900-01	Rice	cytosol	31.58	40.78
GSMUA_Achr11P...	Banana	cytosol, extracellular	30.83	39.81
GSMUA_Achr5P00380_001	Banana	extracellular	30.83	39.81
GSMUA_Achr8P33660_001	Banana	cytosol	30.83	39.81
TraesCS5B01G101000.1	Wheat	cytosol	30.83	39.81
TraesCS5D01G107300.1	Wheat	cytosol	30.83	39.81
Zm00001d040836_P001	Maize	cytosol	30.83	39.81
CDX70828	Canola	cytosol	30.08	39.22
CDY66333	Canola	cytosol	30.08	39.22
EES00745	Sorghum	cytosol	30.08	38.84
GSMUA_Achr11P...	Banana	cytosol	30.08	38.84
GSMUA_Achr1P26720_001	Banana	cytosol	30.08	38.84
TraesCS5A01G094800.1	Wheat	cytosol	30.08	38.84
TraesCS5B01G100900.1	Wheat	cytosol	30.08	38.84
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	30.08	38.84
CDY09078	Canola	cytosol, extracellular	29.32	38.61
CDY22745	Canola	cytosol, extracellular	29.32	38.61
Solyc06g008760.1.1	Tomato	cytosol	29.32	38.61
Zm00001d027695_P001	Maize	cytosol	30.08	38.46
CDX88929	Canola	cytosol	29.32	38.24
CDX92597	Canola	cytosol	29.32	38.24
CDY13904	Canola	cytosol	29.32	38.24
CDY32430	Canola	cytosol, plastid	29.32	38.24
CDY32431	Canola	cytosol	29.32	38.24
CDY48891	Canola	cytosol	29.32	38.24
GSMUA_Achr7P03690_001	Banana	cytosol	29.32	37.86
GSMUA_Achr8P09970_001	Banana	cytosol	29.32	37.86
TraesCS5A01G094700.1	Wheat	cytosol	29.32	37.86
TraesCS5A01G094900.1	Wheat	extracellular	29.32	37.86
TraesCS5A01G095500.1	Wheat	cytosol	29.32	37.86
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	29.32	37.86
TraesCS5D01G107200.1	Wheat	cytosol	29.32	37.86
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	29.32	37.86
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	29.32	37.86
HORVU5Hr1G025610.1	Barley	cytosol	29.32	37.5
TraesCS3A01G461900.1	Wheat	cytosol, mitochondrion	29.32	37.5
TraesCS3D01G455600.1	Wheat	cytosol, mitochondrion	29.32	37.5
Zm00001d023869_P001	Maize	cytosol	29.32	37.5
CDX90576	Canola	cytosol	28.57	37.25
CDY09747	Canola	cytosol	28.57	37.25
CDY19270	Canola	cytosol, plastid	28.57	37.25
CDY37292	Canola	cytosol, plastid	28.57	37.25
CDY48890	Canola	cytosol, plastid	28.57	37.25
CDY54294	Canola	cytosol	28.57	37.25
CDY54296	Canola	cytosol	28.57	37.25
GSMUA_AchrUn_...	Banana	cytosol, extracellular	28.57	36.89
HORVU5Hr1G010960.1	Barley	cytosol	28.57	36.89
HORVU5Hr1G025680.1	Barley	cytosol	28.57	36.89
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	28.57	36.89
TraesCS5A01G044700.1	Wheat	cytosol	28.57	36.89
TraesCS5B01G048900.1	Wheat	cytosol	28.57	36.89
TraesCS5B01G049200.1	Wheat	cytosol	28.57	36.89
TraesCS5D01G054800.1	Wheat	cytosol	28.57	36.89
TraesCS5D01G054900.1	Wheat	cytosol	28.57	36.89
PGSC0003DMT400029673	Potato	cytosol	29.32	36.79
HORVU5Hr1G025690.1	Barley	cytosol	30.83	36.61
CDY69190	Canola	cytosol	28.57	36.54
Os12t0538700-01	Rice	cytosol	28.57	36.54
TraesCS3A01G462200.1	Wheat	cytosol	28.57	36.54
TraesCS3A01G463000.1	Wheat	cytosol	28.57	36.54
TraesCS3B01G504700.1	Wheat	cytosol	28.57	36.54
TraesCS3D01G456000.1	Wheat	cytosol, mitochondrion	28.57	36.54
TraesCS3D01G456900.1	Wheat	cytosol	28.57	36.54
TraesCS4D01G147300.1	Wheat	cytosol	28.57	36.54
TraesCS5A01G094500.1	Wheat	cytosol	28.57	36.54
TraesCS5A01G094600.1	Wheat	cytosol	28.57	36.54
TraesCS5B01G100600.1	Wheat	cytosol	28.57	36.54
TraesCS5B01G100700.1	Wheat	cytosol	28.57	36.54
TraesCS5D01G106800.1	Wheat	cytosol	28.57	36.54
EES02025	Sorghum	cytosol	29.32	36.45
CDY22746	Canola	cytosol	27.82	36.27
CDY66332	Canola	cytosol	27.82	36.27
EES16093	Sorghum	cytosol	28.57	36.19
HORVU5Hr1G033140.1	Barley	cytosol	28.57	36.19
GSMUA_Achr11P...	Banana	cytosol, extracellular	27.82	35.92
GSMUA_Achr5P00370_001	Banana	cytosol	27.82	35.92
HORVU5Hr1G010870.1	Barley	cytosol	27.82	35.92
Os12t0538600-00	Rice	cytosol, extracellular	27.82	35.92
TraesCS5A01G044900.1	Wheat	cytosol	27.82	35.92
TraesCS5A01G045000.1	Wheat	cytosol	27.82	35.92
TraesCS5B01G048400.1	Wheat	cytosol	27.82	35.92
TraesCS5B01G049100.1	Wheat	cytosol	27.82	35.92
TraesCS5D01G054200.1	Wheat	cytosol	27.82	35.92
TraesCS5D01G055000.1	Wheat	cytosol	27.82	35.92
TraesCS3A01G463200.1	Wheat	cytosol	27.82	35.58
TraesCS3B01G505300.1	Wheat	cytosol	27.82	35.58
TraesCS3B01G506200.1	Wheat	cytosol	27.82	35.58
TraesCS3D01G457200.1	Wheat	cytosol	27.82	35.58
TraesCS5D01G106900.1	Wheat	cytosol	27.82	35.58
Zm00001d023870_P001	Maize	cytosol, extracellular	27.82	35.58
Zm00001d023873_P001	Maize	cytosol	27.82	35.58
CDY09079	Canola	cytosol	27.07	35.29
EES16092	Sorghum	cytosol	27.82	35.24
Zm00001d023872_P001	Maize	cytosol, mitochondrion	27.82	35.24
TraesCS5A01G044100.1	Wheat	cytosol	27.07	34.95
TraesCS5A01G044400.1	Wheat	cytosol	27.07	34.95
TraesCS5A01G044800.1	Wheat	cytosol	27.07	34.95
TraesCS5B01G048300.1	Wheat	cytosol	27.07	34.95
TraesCS5D01G054000.1	Wheat	cytosol	27.07	34.95
TraesCS5D01G055100.1	Wheat	cytosol	27.07	34.95
EES17138	Sorghum	cytosol	27.82	34.91
Solyc09g074570.1.1	Tomato	cytosol	27.82	34.91
Os11t0656000-00	Rice	cytosol, plastid	28.57	34.86
HORVU3Hr1G099090.1	Barley	cytosol	27.07	34.62
TraesCS3B01G506400.1	Wheat	cytosol	27.07	34.62
TraesCS3B01G506500.1	Wheat	cytosol	27.07	34.62
EES16097	Sorghum	cytosol	27.82	34.58
OQU79243	Sorghum	cytosol	27.82	34.58
Zm00001d042187_P001	Maize	cytosol	28.57	34.23
CDX89161	Canola	cytosol	26.32	33.98
TraesCS5B01G048600.1	Wheat	cytosol	26.32	33.98
TraesCS5D01G054400.1	Wheat	cytosol	26.32	33.98
HORVU3Hr1G099050.2	Barley	cytosol	27.07	33.33
Os11t0655900-01	Rice	extracellular	27.07	33.33
Os11t0656700-00	Rice	cytosol, plastid	27.07	33.03
HORVU5Hr1G010950.1	Barley	cytosol	25.56	33.01
TraesCS3A01G462900.1	Wheat	cytosol, extracellular	25.56	32.69
CDX76677	Canola	cytosol	24.81	32.04
CDY11464	Canola	cytosol	24.81	32.04
CDY11465	Canola	cytosol	24.81	32.04
CDY53023	Canola	cytosol	24.81	32.04
CDY71728	Canola	cytosol	33.83	31.69
Zm00001d048720_P001	Maize	cytosol	26.32	31.53
EES08918	Sorghum	cytosol, plastid	24.81	31.43
CDY11462	Canola	cytosol	24.06	31.37
Os11t0656400-00	Rice	cytosol, plastid	25.56	31.19
CDX80138	Canola	cytosol	24.06	31.07
Zm00001d048719_P001	Maize	cytosol	25.56	30.91
CDX69609	Canola	cytosol	23.31	30.69
Os01t0936000-00	Rice	cytosol	28.57	30.4
CDX76675	Canola	cytosol	23.31	30.39
CDX89159	Canola	cytosol	23.31	30.39
CDX89921	Canola	cytosol	23.31	30.39
CDX93949	Canola	cytosol	23.31	30.39
CDY18141	Canola	cytosol	23.31	30.39
EES08919	Sorghum	cytosol	24.81	30.28
Os05t0149950-00	Rice	cytosol, mitochondrion	25.56	29.82
EES16096	Sorghum	cytosol	23.31	29.52
CDX67910	Canola	cytosol	22.56	29.41
CDY25124	Canola	cytosol	22.56	29.41
CDY32493	Canola	cytosol	22.56	29.41
TraesCS3A01G462800.1	Wheat	extracellular	18.05	29.27
CDX70540	Canola	cytosol	30.08	29.2
CDX78558	Canola	cytosol	30.08	29.2
CDX74327	Canola	cytosol	29.32	28.47
CDX85614	Canola	cytosol	29.32	28.47
CDX91918	Canola	cytosol	28.57	28.36
TraesCS3B01G506000.1	Wheat	mitochondrion	17.29	28.05
HORVU5Hr1G025560.1	Barley	cytosol	28.57	27.94
CDX91084	Canola	cytosol	27.82	27.01
HORVU0Hr1G010190.2	Barley	cytosol	21.05	26.67
HORVU3Hr1G099150.1	Barley	cytosol, extracellular	12.78	26.15
CDY58422	Canola	cytosol	25.56	20.24
PGSC0003DMT400013650	Potato	cytosol	22.56	10.17

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:A0A078E9D1	EnsemblPlants:CDX97821	ProteinID:CDX97821	ProteinID:CDX97821.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00105130001	InterPro:Glutaredoxin
InterPro:IPR002109	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF57	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0004EADEA7	:	:	:	:	:

Description

BnaC04g41180D

Coordinates

chrLK031901:+:742599..743000

Molecular Weight (calculated)

15034.6 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.065

Length

133 amino acids

Sequence
(BLAST)

001: MLLHQILFQS TRKKQRKIWF LHHQETSPKL ITLPSRNHGQ SCEDVLGERS GYIQQELVLH VLCIQVLFQT VHEIDKDPDC REIEKALMRL GCSTPVPAIF
101: VGGKLMGSTT EAMSMHLSGS LVPLVKPFQA NLC

Best Arabidopsis Sequence Match ( AT2G30540.1 )
(BLAST)

001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPECR EIEKALMRLG CSTPVPAIFV GGKLIGSTNE VMSLHLSGSL VPLVKPFQAN
101: LC

Arabidopsis Description

GRXS9Monothiol glutaredoxin-S9 [Source:UniProtKB/Swiss-Prot;Acc:O04341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.