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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 3
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
 extracellular: 18372294
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0923800-01
Os02t0510000-01
Os02t0708400-01
Os02t0828566-01
Os03t0401200-01
Os03t0422702-00
Os04t0388800-01
Os04t0654700-02
Os06t0207966-00
Os06t0208100-00

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Os02t0708400-01 AT3G27960.1 21798944
AT4G15700.1 Os04t0654700-02 AT1G22920.1 21798944
AT4G15700.1 Os06t0207966-00 AT1G73360.1 21798944
AT4G15700.1 Os06t0208100-00 AT1G73360.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05230.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05230.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05230.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05230.1 21798944
AT4G15700.1 Os01t0923800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0510000-01 AT2G05250.1 21798944
AT4G15700.1 Os03t0401200-01 AT2G05250.1 21798944
AT4G15700.1 Os04t0388800-01 AT2G05250.1 21798944
AT4G15700.1 Os02t0828566-01 AT5G08330.1 21798944
AT4G15700.1 Os03t0422702-00 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0656400-00 Rice cytosol, plastid 73.15 72.48
Os11t0656700-00 Rice cytosol, plastid 73.15 72.48
Os12t0538700-01 Rice cytosol 69.44 72.12
Os11t0656000-00 Rice cytosol, plastid 71.3 70.64
Os12t0538600-00 Rice cytosol, extracellular 66.67 69.9
GSMUA_Achr8P09970_001 Banana cytosol 62.04 65.05
GSMUA_Achr11P... Banana cytosol, extracellular 60.19 63.11
Os01t0368900-01 Rice cytosol 60.19 63.11
KRH02215 Soybean cytosol 58.33 61.76
KRH50911 Soybean cytosol 56.48 59.8
Solyc01g067440.2.1 Tomato cytosol 56.48 59.8
Bra023688.1-P Field mustard cytosol 55.56 58.82
CDY68328 Canola cytosol 55.56 58.82
KRH11238 Soybean cytosol 55.56 58.82
KRH21035 Soybean cytosol 55.56 58.82
PGSC0003DMT400058325 Potato cytosol 55.56 58.82
Os05t0149950-00 Rice cytosol, mitochondrion 62.04 58.77
VIT_05s0020g01750.t01 Wine grape cytosol 55.56 58.25
Bra002171.1-P Field mustard cytosol 54.63 57.84
Bra006467.1-P Field mustard cytosol 54.63 57.84
CDX70828 Canola cytosol 54.63 57.84
CDX88929 Canola cytosol 54.63 57.84
CDX92597 Canola cytosol 54.63 57.84
CDY02610 Canola cytosol 54.63 57.84
CDY13904 Canola cytosol 54.63 57.84
KRH11237 Soybean cytosol 54.63 57.84
VIT_05s0020g01760.t01 Wine grape cytosol 54.63 57.84
AT2G47870.1 Thale cress cytosol 54.63 57.28
AT3G21460.1 Thale cress mitochondrion 53.7 56.86
KRH21036 Soybean cytosol 53.7 56.86
Bra001831.1-P Field mustard cytosol 52.78 55.88
CDY32431 Canola cytosol 52.78 55.88
CDY48891 Canola cytosol 52.78 55.88
KRH50912 Soybean cytosol 52.78 55.88
Solyc01g067460.1.1 Tomato cytosol 52.78 55.88
AT5G18600.1 Thale cress cytosol 51.85 54.9
Bra023883.1-P Field mustard cytosol, plastid 51.85 54.9
CDY19270 Canola cytosol, plastid 51.85 54.9
CDY37292 Canola cytosol, plastid 51.85 54.9
PGSC0003DMT400058374 Potato cytosol 51.85 54.9
KRG96386 Soybean cytosol 50.93 54.46
KRH68125 Soybean cytosol 50.93 54.46
KRH71536 Soybean extracellular 50.93 54.46
CDY53023 Canola cytosol 51.85 54.37
AT4G15700.1 Thale cress cytosol 50.93 53.92
CDY32430 Canola cytosol, plastid 50.93 53.92
Bra004426.1-P Field mustard cytosol 50.93 53.4
CDX80138 Canola cytosol 50.93 53.4
AT4G15690.1 Thale cress cytosol 50.0 52.94
Bra001830.1-P Field mustard cytosol, plastid 50.0 52.94
CDY48890 Canola cytosol, plastid 50.0 52.94
Os01t0936000-00 Rice cytosol 61.11 52.8
KRH31919 Soybean cytosol, plasma membrane 49.07 52.48
AT4G15660.1 Thale cress cytosol, extracellular 49.07 51.96
Bra033501.1-P Field mustard cytosol 49.07 51.96
Bra033503.1-P Field mustard cytosol 49.07 51.96
CDY66333 Canola cytosol 49.07 51.96
KRH31918 Soybean cytosol 49.07 51.96
KRH71537 Soybean cytosol 49.07 51.96
VIT_07s0104g01390.t01 Wine grape plasma membrane 49.07 51.96
AT3G62950.1 Thale cress cytosol 49.07 51.46
Bra033504.1-P Field mustard cytosol 45.37 51.04
AT4G15670.1 Thale cress cytosol 48.15 50.98
AT4G15680.1 Thale cress cytosol 48.15 50.98
CDY54294 Canola cytosol 48.15 50.98
CDY66332 Canola cytosol 48.15 50.98
PGSC0003DMT400029525 Potato cytosol 48.15 50.98
Solyc09g074590.1.1 Tomato cytosol 48.15 50.98
Bra007717.1-P Field mustard cytosol 36.11 50.65
Bra014380.1-P Field mustard cytosol 48.15 50.49
CDX76677 Canola cytosol 48.15 50.49
CDX89161 Canola cytosol 48.15 50.49
CDY11464 Canola cytosol 48.15 50.49
CDY11465 Canola cytosol 48.15 50.49
Bra012773.1-P Field mustard cytosol 47.22 50.0
CDX90576 Canola cytosol 47.22 50.0
CDY09747 Canola cytosol 47.22 50.0
CDY22746 Canola cytosol 47.22 50.0
CDY54296 Canola cytosol 47.22 50.0
PGSC0003DMT400029597 Potato cytosol 47.22 50.0
Solyc09g074600.1.1 Tomato cytosol 47.22 50.0
VIT_07s0104g01400.t01 Wine grape cytosol 47.22 50.0
Solyc06g054570.1.1 Tomato cytosol 47.22 49.51
Bra038076.1-P Field mustard cytosol, extracellular 46.3 49.51
CDY09078 Canola cytosol, extracellular 46.3 49.51
CDY22745 Canola cytosol, extracellular 46.3 49.51
PGSC0003DMT400079099 Potato cytosol 44.44 49.48
CDY69190 Canola cytosol 47.22 49.04
Bra004424.1-P Field mustard cytosol 46.3 49.02
Bra038075.1-P Field mustard cytosol 46.3 49.02
CDX80139 Canola cytosol 46.3 49.02
CDY53024 Canola cytosol 46.3 49.02
Bra033499.1-P Field mustard cytosol 44.44 48.98
Os04t0393500-01 Rice cytosol 61.11 48.89
AT2G30540.1 Thale cress cytosol 45.37 48.04
CDY09079 Canola cytosol 45.37 48.04
KRG96387 Soybean cytosol 45.37 48.04
KRH68127 Soybean cytosol 45.37 48.04
PGSC0003DMT400029596 Potato cytosol 45.37 48.04
Solyc09g074580.1.1 Tomato cytosol 45.37 48.04
PGSC0003DMT400042706 Potato cytosol 45.37 47.57
Solyc06g008760.1.1 Tomato cytosol 44.44 47.52
AT1G06830.1 Thale cress cytosol 43.52 47.47
Bra031540.1-P Field mustard cytosol 43.52 47.47
CDY06230 Canola cytosol 43.52 47.47
CDY09953 Canola cytosol 43.52 47.47
AT2G47880.1 Thale cress cytosol 44.44 47.06
Bra021641.1-P Field mustard cytosol 44.44 47.06
CDY23990 Canola cytosol 44.44 47.06
CDY29666 Canola cytosol 44.44 47.06
CDY52638 Canola cytosol 44.44 47.06
PGSC0003DMT400041381 Potato cytosol, plastid 44.44 47.06
Solyc06g008750.1.1 Tomato cytosol 44.44 47.06
CDY55528 Canola cytosol 45.37 46.67
Os02t0512400-01 Rice cytosol 58.33 46.67
AT3G62960.1 Thale cress cytosol 43.52 46.08
Bra007718.1-P Field mustard cytosol 43.52 46.08
Bra018307.1-P Field mustard cytosol 43.52 46.08
CDX76678 Canola cytosol 43.52 46.08
CDX84825 Canola cytosol 43.52 46.08
CDX95739 Canola cytosol 43.52 46.08
CDY10745 Canola cytosol 43.52 46.08
CDY11466 Canola cytosol 43.52 46.08
PGSC0003DMT400013649 Potato cytosol 43.52 46.08
Bra021444.1-P Field mustard cytosol 44.44 45.71
CDY27469 Canola cytosol 44.44 45.71
CDY10229 Canola cytosol 41.67 45.45
CDY54881 Canola cytosol 41.67 45.45
Bra014379.1-P Field mustard cytosol 42.59 45.1
CDX89162 Canola cytosol 42.59 45.1
CDX97824 Canola cytosol 42.59 45.1
CDY68061 Canola cytosol 42.59 45.1
PGSC0003DMT400041380 Potato cytosol, plastid 42.59 45.1
Solyc04g011790.1.1 Tomato cytosol, plastid 42.59 45.1
Solyc04g011870.1.1 Tomato cytosol, plastid 41.67 44.12
PGSC0003DMT400041379 Potato cytosol, plastid 37.96 43.16
Bra003517.1-P Field mustard cytosol, extracellular 40.74 43.14
KRH68129 Soybean cytosol 40.74 43.14
PGSC0003DMT400027946 Potato cytosol, plastid 40.74 43.14
PGSC0003DMT400041382 Potato cytosol 40.74 43.14
Solyc04g011830.1.1 Tomato cytosol, plastid 40.74 43.14
Solyc04g011840.1.1 Tomato cytosol 40.74 43.14
Solyc04g011850.1.1 Tomato cytosol 40.74 43.14
AT1G03020.1 Thale cress cytosol 39.81 42.16
Bra032563.1-P Field mustard cytosol 39.81 42.16
CDY32493 Canola cytosol 39.81 42.16
KRG96389 Soybean cytosol 39.81 42.16
KRH31917 Soybean cytosol 39.81 42.16
KRH71538 Soybean cytosol 39.81 42.16
PGSC0003DMT400027947 Potato cytosol, plastid 39.81 42.16
PGSC0003DMT400027948 Potato cytosol, plastid 39.81 42.16
PGSC0003DMT400027950 Potato cytosol, plastid 39.81 42.16
PGSC0003DMT400027951 Potato cytosol, plastid 39.81 42.16
PGSC0003DMT400041378 Potato cytosol, plastid 39.81 42.16
Solyc04g011810.1.1 Tomato cytosol, plastid 39.81 42.16
Solyc04g011860.1.1 Tomato cytosol, plastid 39.81 42.16
Solyc04g011820.1.1 Tomato cytosol 37.04 42.11
PGSC0003DMT400027953 Potato cytosol, plastid 38.89 41.58
VIT_07s0104g01420.t01 Wine grape cytosol 40.74 41.51
PGSC0003DMT400077394 Potato cytosol 39.81 41.35
Solyc05g051720.1.1 Tomato cytosol 39.81 41.35
Bra003515.1-P Field mustard cytosol 38.89 41.18
CDX67910 Canola cytosol 38.89 41.18
PGSC0003DMT400027949 Potato cytosol, plastid 38.89 41.18
PGSC0003DMT400027954 Potato cytosol, plastid 38.89 41.18
Solyc04g011800.1.1 Tomato cytosol, plastid 38.89 41.18
PGSC0003DMT400027952 Potato cytosol 36.11 41.05
Solyc05g051730.1.1 Tomato cytosol 38.89 40.78
PGSC0003DMT400029673 Potato cytosol 39.81 40.57
Bra014382.1-P Field mustard cytosol 37.96 40.2
Bra033366.1-P Field mustard cytosol 37.96 40.2
CDX89159 Canola cytosol 37.96 40.2
CDX89921 Canola cytosol 37.96 40.2
CDX93949 Canola cytosol 37.96 40.2
CDY18141 Canola cytosol 37.96 40.2
CDY25124 Canola cytosol 37.96 40.2
Solyc04g011780.1.1 Tomato extracellular 37.96 40.2
PGSC0003DMT400077393 Potato cytosol 37.96 39.81
AT3G62930.1 Thale cress cytosol 37.04 39.22
CDX76675 Canola cytosol 37.04 39.22
Solyc04g011880.1.1 Tomato cytosol, plastid 37.04 39.22
Solyc04g053110.1.1 Tomato cytosol 37.04 39.22
KRH31916 Soybean cytosol 34.26 38.95
Solyc09g074570.1.1 Tomato cytosol 37.96 38.68
Bra007714.1-P Field mustard cytosol 36.11 38.24
CDY11462 Canola cytosol 36.11 38.24
PGSC0003DMT400042707 Potato cytosol 36.11 38.24
KRH68130 Soybean cytosol, plastid 36.11 37.14
KRH31915 Soybean cytosol, plastid 35.19 36.19
KRG96390 Soybean cytosol, plastid 34.26 35.24
Os07t0151100-01 Rice cytosol 51.85 29.17
Bra015532.1-P Field mustard cytosol 37.04 27.59
CDY71728 Canola cytosol 36.11 27.46
CDX97821 Canola mitochondrion 33.33 27.07
PGSC0003DMT400013650 Potato cytosol 35.19 12.88
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EntrezGene:4351046ProteinID:ABA95122.1EMBL:AK108017ProteinID:BAF28753.1
ProteinID:BAT15102.1ProteinID:EAZ19160.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454
GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109EnsemblPlantsGene:Os11g0655900
EnsemblPlants:Os11t0655900-01PFAM:PF00462PRINTS:PR00160PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF72
UniProt:Q2R076SUPFAM:SSF52833TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0000681D2BRefSeq:XP_015616678.1
SEG:seg:::::
Description
GLUTAREDOXIN 23Thioredoxin fold domain containing protein. (Os11t0655900-01)
Coordinates
chr11:+:26269974..26270560
Molecular Weight (calculated)
11232.8 Da
IEP (calculated)
8.823
GRAVY (calculated)
0.207
Length
108 amino acids
Sequence
(BLAST)
001: MERVAKLASE RAVVVFTASN CGMCHAVTSL LVGELGVNAA VHELDKDPRG RDMERELARR LNGGGGGGRA LPAVFVGGNL VGGANRVMSL HLAGELVPML
101: KNAGALWL
Best Arabidopsis Sequence Match ( AT4G15700.1 )
(BLAST)
001: MENLQKMISE KSVVIFSKNS CCMSHTIKTL FLDLGVNPTI YELDEISRGK EIEHALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL
Arabidopsis Description
GRXS3Monothiol glutaredoxin-S3 [Source:UniProtKB/Swiss-Prot;Acc:O23421]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.