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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • mitochondrion 1
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra000476.1-P
Bra011357.1-P
Bra025315.1-P
Bra039514.1-P
Bra040086.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 Bra000476.1-P AT2G29310.1 21798944
AT2G30540.1 Bra039514.1-P AT2G29310.1 21798944
AT2G30540.1 Bra025315.1-P AT3G27960.1 21798944
AT2G30540.1 Bra011357.1-P AT4G32570.1 21798944
AT2G30540.1 Bra040086.1-P AT4G32570.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29666 Canola cytosol 100.0 100.0
Bra018307.1-P Field mustard cytosol 97.06 97.06
AT2G30540.1 Thale cress cytosol 96.08 96.08
Bra031540.1-P Field mustard cytosol 82.35 84.85
Bra004424.1-P Field mustard cytosol 78.43 78.43
Bra007718.1-P Field mustard cytosol 75.49 75.49
Bra014379.1-P Field mustard cytosol 75.49 75.49
Bra021444.1-P Field mustard cytosol 77.45 75.24
VIT_07s0104g01390.t01 Wine grape plasma membrane 74.51 74.51
Bra003517.1-P Field mustard cytosol, extracellular 73.53 73.53
KRH31919 Soybean cytosol, plasma membrane 71.57 72.28
KRG96386 Soybean cytosol 68.63 69.31
KRH71536 Soybean extracellular 68.63 69.31
KRH68125 Soybean cytosol 67.65 68.32
Solyc06g008760.1.1 Tomato cytosol 61.76 62.38
PGSC0003DMT400029673 Potato cytosol 61.76 59.43
Solyc09g074570.1.1 Tomato cytosol 58.82 56.6
Os01t0368900-01 Rice cytosol 56.86 56.31
Zm00001d040837_P001 Maize cytosol 56.86 56.31
Bra023688.1-P Field mustard cytosol 55.88 55.88
EES00746 Sorghum cytosol 55.88 55.34
GSMUA_Achr11P... Banana cytosol, extracellular 55.88 55.34
TraesCS5B01G100900.1 Wheat cytosol 55.88 55.34
GSMUA_Achr11P... Banana cytosol 54.9 54.37
TraesCS5A01G094700.1 Wheat cytosol 54.9 54.37
TraesCS5B01G101100.1 Wheat cytosol, extracellular 54.9 54.37
TraesCS5D01G107200.1 Wheat cytosol 54.9 54.37
Bra002171.1-P Field mustard cytosol 53.92 53.92
Bra033503.1-P Field mustard cytosol 53.92 53.92
TraesCS5B01G049000.1 Wheat cytosol 45.1 53.49
TraesCS5A01G094900.1 Wheat extracellular 53.92 53.4
TraesCS5B01G101600.1 Wheat cytosol, extracellular 53.92 53.4
TraesCS5D01G107300.1 Wheat cytosol 53.92 53.4
TraesCS5D01G107500.1 Wheat cytosol, extracellular 53.92 53.4
TraesCS5D01G108100.1 Wheat cytosol, extracellular 53.92 53.4
Zm00001d040836_P001 Maize cytosol 53.92 53.4
Bra006467.1-P Field mustard cytosol 52.94 52.94
Bra033501.1-P Field mustard cytosol 52.94 52.94
TraesCS5A01G094500.1 Wheat cytosol 53.92 52.88
TraesCS5B01G100600.1 Wheat cytosol 53.92 52.88
TraesCS5D01G106800.1 Wheat cytosol 53.92 52.88
Zm00001d027695_P001 Maize cytosol 53.92 52.88
EES00745 Sorghum cytosol 52.94 52.43
GSMUA_Achr1P26720_001 Banana cytosol 52.94 52.43
HORVU5Hr1G025680.1 Barley cytosol 52.94 52.43
HORVU5Hr1G025710.1 Barley cytosol, extracellular 52.94 52.43
TraesCS5A01G095500.1 Wheat cytosol 52.94 52.43
TraesCS5B01G101000.1 Wheat cytosol 52.94 52.43
Bra015532.1-P Field mustard cytosol 74.51 52.41
HORVU5Hr1G033140.1 Barley cytosol 53.92 52.38
Bra001831.1-P Field mustard cytosol 51.96 51.96
Bra023883.1-P Field mustard cytosol, plastid 51.96 51.96
GSMUA_Achr5P00380_001 Banana extracellular 51.96 51.46
GSMUA_Achr8P33660_001 Banana cytosol 51.96 51.46
GSMUA_AchrUn_... Banana cytosol, extracellular 51.96 51.46
HORVU5Hr1G010960.1 Barley cytosol 51.96 51.46
Os12t0538600-00 Rice cytosol, extracellular 51.96 51.46
TraesCS5A01G044700.1 Wheat cytosol 51.96 51.46
TraesCS5A01G044900.1 Wheat cytosol 51.96 51.46
TraesCS5A01G094800.1 Wheat cytosol 51.96 51.46
TraesCS5B01G048900.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054000.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054200.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054800.1 Wheat cytosol 51.96 51.46
TraesCS5D01G054900.1 Wheat cytosol 51.96 51.46
Bra033504.1-P Field mustard cytosol 48.04 51.04
Bra033499.1-P Field mustard cytosol 49.02 51.02
Bra012773.1-P Field mustard cytosol 50.98 50.98
Bra038076.1-P Field mustard cytosol, extracellular 50.0 50.49
GSMUA_Achr5P00370_001 Banana cytosol 50.98 50.49
GSMUA_Achr7P03690_001 Banana cytosol 50.98 50.49
TraesCS5A01G044100.1 Wheat cytosol 50.98 50.49
TraesCS5A01G045000.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048300.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048400.1 Wheat cytosol 50.98 50.49
TraesCS5B01G048600.1 Wheat cytosol 50.98 50.49
TraesCS5B01G049100.1 Wheat cytosol 50.98 50.49
TraesCS5B01G049200.1 Wheat cytosol 50.98 50.49
TraesCS5D01G055000.1 Wheat cytosol 50.98 50.49
HORVU5Hr1G025610.1 Barley cytosol 50.98 50.0
Os12t0538700-01 Rice cytosol 50.98 50.0
EES02025 Sorghum cytosol 51.96 49.53
GSMUA_Achr8P09970_001 Banana cytosol 50.0 49.51
HORVU5Hr1G010870.1 Barley cytosol 50.0 49.51
TraesCS5A01G044400.1 Wheat cytosol 50.0 49.51
TraesCS5A01G044800.1 Wheat cytosol 50.0 49.51
TraesCS5D01G054400.1 Wheat cytosol 50.0 49.51
TraesCS5D01G055100.1 Wheat cytosol 50.0 49.51
HORVU5Hr1G025690.1 Barley cytosol 53.92 49.11
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 50.0 49.04
TraesCS3A01G462200.1 Wheat cytosol 50.0 49.04
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 50.0 49.04
TraesCS5A01G094600.1 Wheat cytosol 50.0 49.04
TraesCS5B01G100700.1 Wheat cytosol 50.0 49.04
Zm00001d023869_P001 Maize cytosol 50.0 49.04
Zm00001d023873_P001 Maize cytosol 50.0 49.04
Bra001830.1-P Field mustard cytosol, plastid 49.02 49.02
Bra038075.1-P Field mustard cytosol 49.02 49.02
GSMUA_Achr11P... Banana cytosol, extracellular 49.02 48.54
TraesCS3A01G463000.1 Wheat cytosol 49.02 48.08
TraesCS3B01G504700.1 Wheat cytosol 49.02 48.08
TraesCS3D01G456900.1 Wheat cytosol 49.02 48.08
TraesCS5D01G106900.1 Wheat cytosol 49.02 48.08
Zm00001d023870_P001 Maize cytosol, extracellular 49.02 48.08
EES16092 Sorghum cytosol 49.02 47.62
EES16093 Sorghum cytosol 49.02 47.62
TraesCS3B01G506200.1 Wheat cytosol 48.04 47.12
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 48.04 47.12
TraesCS4D01G147300.1 Wheat cytosol 48.04 47.12
Os11t0656000-00 Rice cytosol, plastid 50.0 46.79
Bra007717.1-P Field mustard cytosol 35.29 46.75
Zm00001d023872_P001 Maize cytosol, mitochondrion 48.04 46.67
HORVU5Hr1G010950.1 Barley cytosol 47.06 46.6
EES17138 Sorghum cytosol 48.04 46.23
HORVU3Hr1G099090.1 Barley cytosol 47.06 46.15
TraesCS3A01G463200.1 Wheat cytosol 47.06 46.15
TraesCS3B01G505300.1 Wheat cytosol 47.06 46.15
TraesCS3B01G506500.1 Wheat cytosol 47.06 46.15
Zm00001d042187_P001 Maize cytosol 50.0 45.95
TraesCS3B01G506400.1 Wheat cytosol 46.08 45.19
TraesCS3D01G457200.1 Wheat cytosol 46.08 45.19
Os11t0656700-00 Rice cytosol, plastid 48.04 44.95
OQU79243 Sorghum cytosol 47.06 44.86
Bra014380.1-P Field mustard cytosol 45.1 44.66
Os11t0655900-01 Rice extracellular 47.06 44.44
TraesCS3A01G462900.1 Wheat cytosol, extracellular 45.1 44.23
Zm00001d048720_P001 Maize cytosol 48.04 44.14
EES16097 Sorghum cytosol 46.08 43.93
HORVU3Hr1G099050.2 Barley cytosol 46.08 43.52
Os11t0656400-00 Rice cytosol, plastid 46.08 43.12
HORVU3Hr1G099150.1 Barley cytosol, extracellular 27.45 43.08
Os05t0149950-00 Rice cytosol, mitochondrion 48.04 42.98
Zm00001d048719_P001 Maize cytosol 46.08 42.73
Bra014382.1-P Field mustard cytosol 42.16 42.16
EES08918 Sorghum cytosol, plastid 43.14 41.9
EES16096 Sorghum cytosol 43.14 41.9
Bra004426.1-P Field mustard cytosol 42.16 41.75
HORVU5Hr1G025560.1 Barley cytosol 53.92 40.44
EES08919 Sorghum cytosol 43.14 40.37
TraesCS3A01G462800.1 Wheat extracellular 32.35 40.24
Bra007714.1-P Field mustard cytosol 40.2 40.2
Os01t0936000-00 Rice cytosol 49.02 40.0
Bra003515.1-P Field mustard cytosol 39.22 39.22
TraesCS3B01G506000.1 Wheat mitochondrion 31.37 39.02
Bra032563.1-P Field mustard cytosol 38.24 38.24
Bra033366.1-P Field mustard cytosol 38.24 38.24
Bra006236.1-P Field mustard cytosol 48.04 36.03
Bra023448.1-P Field mustard cytosol 48.04 35.77
Bra000980.1-P Field mustard cytosol 47.06 35.04
Bra008782.1-P Field mustard cytosol 45.1 34.33
HORVU0Hr1G010190.2 Barley cytosol 32.35 31.43
PGSC0003DMT400013650 Potato cytosol 49.02 16.95
Protein Annotations
MapMan:18.8.2MapMan:25.1.1.3Gene3D:3.40.30.10EnsemblPlantsGene:Bra021641EnsemblPlants:Bra021641.1EnsemblPlants:Bra021641.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900
GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:IPR002109UniProt:M4DYP5
PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF57SUPFAM:SSF52833TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI0002544601::::
Description
AT2G30540 (E=7e-054) | glutaredoxin family protein
Coordinates
chrA04:-:13605087..13605395
Molecular Weight (calculated)
11070.7 Da
IEP (calculated)
7.342
GRAVY (calculated)
0.260
Length
102 amino acids
Sequence
(BLAST)
001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPDCR EIEKAIMRLG CSTPVPAIFV GGKLVGSTNE VMSMHLSGSL VPLVKPFQAN
101: LC
Best Arabidopsis Sequence Match ( AT2G30540.1 )
(BLAST)
001: MDKVVRMSSE KGVVIFSKSS CCMSYAVQVL FQDLGVHPTV HEIDKDPECR EIEKALMRLG CSTPVPAIFV GGKLIGSTNE VMSLHLSGSL VPLVKPFQAN
101: LC
Arabidopsis Description
GRXS9Monothiol glutaredoxin-S9 [Source:UniProtKB/Swiss-Prot;Acc:O04341]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.