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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • mitochondrion 1
  • cytosol 2
  • plastid 2
  • extracellular 2
  • endoplasmic reticulum 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
EER89393
EES05647
EES05874
EES07800
EES07899
EES10633
EES10933
KXG27287
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G30540.1 EES05647 AT3G27960.1 21798944
AT4G15700.1 KXG27287 AT1G22920.1 21798944
AT4G15700.1 EER89393 AT1G73360.1 21798944
AT4G15700.1 EES05874 AT1G73360.1 21798944
AT4G15700.1 EES07899 AT2G05230.1 21798944
AT4G15700.1 EES10633 AT2G05230.1 21798944
AT4G15700.1 EES10933 AT2G05230.1 21798944
AT4G15700.1 KXG34016 AT2G05230.1 21798944
AT4G15700.1 OQU85000 AT2G05230.1 21798944
AT4G15700.1 EES07899 AT2G05250.1 21798944
AT4G15700.1 EES10633 AT2G05250.1 21798944
AT4G15700.1 EES10933 AT2G05250.1 21798944
AT4G15700.1 KXG34016 AT2G05250.1 21798944
AT4G15700.1 OQU85000 AT2G05250.1 21798944
AT4G15700.1 EES07800 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES16097 Sorghum cytosol 99.07 99.07
Zm00001d023870_P001 Maize cytosol, extracellular 86.92 89.42
EES16092 Sorghum cytosol 85.98 87.62
HORVU5Hr1G025610.1 Barley cytosol 78.5 80.77
HORVU5Hr1G025710.1 Barley cytosol, extracellular 77.57 80.58
TraesCS5B01G100700.1 Wheat cytosol 77.57 79.81
TraesCS5B01G101600.1 Wheat cytosol, extracellular 76.64 79.61
TraesCS5D01G108100.1 Wheat cytosol, extracellular 76.64 79.61
TraesCS5A01G094600.1 Wheat cytosol 76.64 78.85
TraesCS5A01G094900.1 Wheat extracellular 75.7 78.64
TraesCS5D01G107500.1 Wheat cytosol, extracellular 75.7 78.64
TraesCS5D01G106900.1 Wheat cytosol 75.7 77.88
TraesCS5A01G095500.1 Wheat cytosol 74.77 77.67
TraesCS5B01G101100.1 Wheat cytosol, extracellular 74.77 77.67
EES16096 Sorghum cytosol 71.96 73.33
EES00746 Sorghum cytosol 65.42 67.96
EES00745 Sorghum cytosol 63.55 66.02
GSMUA_Achr11P... Banana cytosol, extracellular 63.55 66.02
EES08918 Sorghum cytosol, plastid 64.49 65.71
EES08919 Sorghum cytosol 66.36 65.14
GSMUA_Achr11P... Banana cytosol 62.62 65.05
GSMUA_Achr1P26720_001 Banana cytosol 61.68 64.08
GSMUA_Achr5P00370_001 Banana cytosol 61.68 64.08
EES16093 Sorghum cytosol 62.62 63.81
KRH11237 Soybean cytosol 60.75 63.73
GSMUA_Achr5P00380_001 Banana extracellular 59.81 62.14
GSMUA_Achr7P03690_001 Banana cytosol 59.81 62.14
KRH02215 Soybean cytosol 58.88 61.76
KRH21036 Soybean cytosol 58.88 61.76
GSMUA_Achr8P33660_001 Banana cytosol 58.88 61.16
EES17138 Sorghum cytosol 59.81 60.38
GSMUA_AchrUn_... Banana cytosol, extracellular 57.94 60.19
EES02025 Sorghum cytosol 59.81 59.81
Bra023688.1-P Field mustard cytosol 57.01 59.8
KRH50911 Soybean cytosol 57.01 59.8
Bra002171.1-P Field mustard cytosol 56.07 58.82
CDX70828 Canola cytosol 56.07 58.82
CDX92597 Canola cytosol 56.07 58.82
CDY02610 Canola cytosol 56.07 58.82
CDY13904 Canola cytosol 56.07 58.82
CDY68328 Canola cytosol 56.07 58.82
VIT_05s0020g01750.t01 Wine grape cytosol 56.07 58.25
Bra006467.1-P Field mustard cytosol 55.14 57.84
CDX88929 Canola cytosol 55.14 57.84
Solyc01g067440.2.1 Tomato cytosol 55.14 57.84
KRG96386 Soybean cytosol 54.21 57.43
KRH71536 Soybean extracellular 54.21 57.43
Solyc01g067460.1.1 Tomato cytosol 54.21 56.86
KRH68125 Soybean cytosol 53.27 56.44
AT5G18600.1 Thale cress cytosol 53.27 55.88
PGSC0003DMT400058325 Potato cytosol 53.27 55.88
PGSC0003DMT400058374 Potato cytosol 53.27 55.88
VIT_05s0020g01760.t01 Wine grape cytosol 53.27 55.88
Bra033504.1-P Field mustard cytosol 49.53 55.21
AT4G15700.1 Thale cress cytosol 52.34 54.9
CDY54296 Canola cytosol 52.34 54.9
KRG96387 Soybean cytosol 52.34 54.9
KRH11238 Soybean cytosol 52.34 54.9
KRH31918 Soybean cytosol 52.34 54.9
KRH68127 Soybean cytosol 52.34 54.9
KRH71537 Soybean cytosol 52.34 54.9
KRH31919 Soybean cytosol, plasma membrane 51.4 54.46
Bra004424.1-P Field mustard cytosol 51.4 53.92
Bra012773.1-P Field mustard cytosol 51.4 53.92
CDX80139 Canola cytosol 51.4 53.92
CDX90576 Canola cytosol 51.4 53.92
CDY09747 Canola cytosol 51.4 53.92
CDY53024 Canola cytosol 51.4 53.92
CDY66332 Canola cytosol 51.4 53.92
KRH21035 Soybean cytosol 51.4 53.92
VIT_07s0104g01390.t01 Wine grape plasma membrane 51.4 53.92
AT2G47870.1 Thale cress cytosol 51.4 53.4
AT4G15660.1 Thale cress cytosol, extracellular 50.47 52.94
Bra033503.1-P Field mustard cytosol 50.47 52.94
CDY66333 Canola cytosol 50.47 52.94
KRH50912 Soybean cytosol 50.47 52.94
PGSC0003DMT400029525 Potato cytosol 50.47 52.94
PGSC0003DMT400041381 Potato cytosol, plastid 50.47 52.94
Bra004426.1-P Field mustard cytosol 50.47 52.43
CDX80138 Canola cytosol 50.47 52.43
CDY53023 Canola cytosol 50.47 52.43
AT2G47880.1 Thale cress cytosol 49.53 51.96
AT3G21460.1 Thale cress mitochondrion 49.53 51.96
AT4G15670.1 Thale cress cytosol 49.53 51.96
AT4G15680.1 Thale cress cytosol 49.53 51.96
AT4G15690.1 Thale cress cytosol 49.53 51.96
Bra033501.1-P Field mustard cytosol 49.53 51.96
CDX95739 Canola cytosol 49.53 51.96
PGSC0003DMT400029597 Potato cytosol 49.53 51.96
Solyc09g074590.1.1 Tomato cytosol 49.53 51.96
Solyc09g074600.1.1 Tomato cytosol 49.53 51.96
Solyc06g008760.1.1 Tomato cytosol 48.6 51.49
PGSC0003DMT400042706 Potato cytosol 49.53 51.46
CDY27469 Canola cytosol 50.47 51.43
CDY55528 Canola cytosol 50.47 51.43
Bra033499.1-P Field mustard cytosol 46.73 51.02
Bra001831.1-P Field mustard cytosol 48.6 50.98
CDY22746 Canola cytosol 48.6 50.98
CDY32430 Canola cytosol, plastid 48.6 50.98
CDY32431 Canola cytosol 48.6 50.98
CDY48891 Canola cytosol 48.6 50.98
CDY54294 Canola cytosol 48.6 50.98
PGSC0003DMT400029596 Potato cytosol 48.6 50.98
Solyc04g011790.1.1 Tomato cytosol, plastid 48.6 50.98
Solyc06g008750.1.1 Tomato cytosol 48.6 50.98
AT1G06830.1 Thale cress cytosol 46.73 50.51
Bra031540.1-P Field mustard cytosol 46.73 50.51
CDY06230 Canola cytosol 46.73 50.51
CDY09953 Canola cytosol 46.73 50.51
Bra038076.1-P Field mustard cytosol, extracellular 47.66 50.49
CDY09078 Canola cytosol, extracellular 47.66 50.49
CDY22745 Canola cytosol, extracellular 47.66 50.49
Bra021444.1-P Field mustard cytosol 49.53 50.48
Bra001830.1-P Field mustard cytosol, plastid 47.66 50.0
Bra038075.1-P Field mustard cytosol 47.66 50.0
CDY48890 Canola cytosol, plastid 47.66 50.0
CDY69190 Canola cytosol 48.6 50.0
PGSC0003DMT400013649 Potato cytosol 47.66 50.0
PGSC0003DMT400041380 Potato cytosol, plastid 47.66 50.0
Solyc09g074580.1.1 Tomato cytosol 47.66 50.0
CDY10229 Canola cytosol 45.79 49.49
PGSC0003DMT400079099 Potato cytosol 44.86 49.48
Bra007717.1-P Field mustard cytosol 35.51 49.35
AT3G62960.1 Thale cress cytosol 46.73 49.02
Bra007718.1-P Field mustard cytosol 46.73 49.02
Bra023883.1-P Field mustard cytosol, plastid 46.73 49.02
CDX76678 Canola cytosol 46.73 49.02
CDY11466 Canola cytosol 46.73 49.02
CDY19270 Canola cytosol, plastid 46.73 49.02
CDY37292 Canola cytosol, plastid 46.73 49.02
PGSC0003DMT400027946 Potato cytosol, plastid 46.73 49.02
PGSC0003DMT400041378 Potato cytosol, plastid 46.73 49.02
PGSC0003DMT400041382 Potato cytosol 46.73 49.02
Solyc04g011830.1.1 Tomato cytosol, plastid 46.73 49.02
Solyc04g011850.1.1 Tomato cytosol 46.73 49.02
Solyc04g011870.1.1 Tomato cytosol, plastid 46.73 49.02
VIT_07s0104g01400.t01 Wine grape cytosol 46.73 49.02
Solyc06g054570.1.1 Tomato cytosol 46.73 48.54
Solyc04g011820.1.1 Tomato cytosol 42.99 48.42
AT2G30540.1 Thale cress cytosol 45.79 48.04
Bra014379.1-P Field mustard cytosol 45.79 48.04
CDX89162 Canola cytosol 45.79 48.04
CDY09079 Canola cytosol 45.79 48.04
CDY68061 Canola cytosol 45.79 48.04
PGSC0003DMT400027947 Potato cytosol, plastid 45.79 48.04
PGSC0003DMT400027948 Potato cytosol, plastid 45.79 48.04
PGSC0003DMT400027950 Potato cytosol, plastid 45.79 48.04
PGSC0003DMT400027951 Potato cytosol, plastid 45.79 48.04
Solyc04g011810.1.1 Tomato cytosol, plastid 45.79 48.04
AT3G62950.1 Thale cress cytosol 45.79 47.57
Bra014380.1-P Field mustard cytosol 45.79 47.57
CDX89161 Canola cytosol 45.79 47.57
PGSC0003DMT400027953 Potato cytosol, plastid 44.86 47.52
CDY54881 Canola cytosol 43.93 47.47
PGSC0003DMT400027952 Potato cytosol 42.06 47.37
PGSC0003DMT400041379 Potato cytosol, plastid 42.06 47.37
EES05136 Sorghum cytosol 57.01 47.29
Bra003517.1-P Field mustard cytosol, extracellular 44.86 47.06
Bra021641.1-P Field mustard cytosol 44.86 47.06
CDY23990 Canola cytosol 44.86 47.06
CDY29666 Canola cytosol 44.86 47.06
CDY52638 Canola cytosol 44.86 47.06
KRH31917 Soybean cytosol 44.86 47.06
PGSC0003DMT400027949 Potato cytosol, plastid 44.86 47.06
PGSC0003DMT400027954 Potato cytosol, plastid 44.86 47.06
Solyc04g011800.1.1 Tomato cytosol, plastid 44.86 47.06
Solyc04g011840.1.1 Tomato cytosol 44.86 47.06
Solyc04g011860.1.1 Tomato cytosol, plastid 44.86 47.06
CDX76677 Canola cytosol 44.86 46.6
CDY11464 Canola cytosol 44.86 46.6
CDY11465 Canola cytosol 44.86 46.6
Bra018307.1-P Field mustard cytosol 43.93 46.08
CDX84825 Canola cytosol 43.93 46.08
CDY10745 Canola cytosol 43.93 46.08
KRH68129 Soybean cytosol 43.93 46.08
KRH71538 Soybean cytosol 43.93 46.08
Solyc04g011780.1.1 Tomato extracellular 43.93 46.08
VIT_07s0104g01420.t01 Wine grape cytosol 44.86 45.28
AT1G03020.1 Thale cress cytosol 42.99 45.1
Bra014382.1-P Field mustard cytosol 42.99 45.1
CDX76675 Canola cytosol 42.99 45.1
CDX89159 Canola cytosol 42.99 45.1
CDX93949 Canola cytosol 42.99 45.1
CDX97824 Canola cytosol 42.99 45.1
KRG96389 Soybean cytosol 42.99 45.1
Solyc04g011880.1.1 Tomato cytosol, plastid 42.99 45.1
Solyc05g051730.1.1 Tomato cytosol 42.99 44.66
PGSC0003DMT400077394 Potato cytosol 42.99 44.23
Solyc05g051720.1.1 Tomato cytosol 42.99 44.23
AT3G62930.1 Thale cress cytosol 42.06 44.12
Bra003515.1-P Field mustard cytosol 42.06 44.12
Bra007714.1-P Field mustard cytosol 42.06 44.12
CDX67910 Canola cytosol 42.06 44.12
CDY11462 Canola cytosol 42.06 44.12
PGSC0003DMT400077393 Potato cytosol 42.06 43.69
Bra032563.1-P Field mustard cytosol 41.12 43.14
CDY18141 Canola cytosol 41.12 43.14
CDY25124 Canola cytosol 41.12 43.14
CDY32493 Canola cytosol 41.12 43.14
Solyc04g053110.1.1 Tomato cytosol 41.12 43.14
EES10652 Sorghum cytosol 55.14 43.07
PGSC0003DMT400029673 Potato cytosol 42.06 42.45
Bra033366.1-P Field mustard cytosol 40.19 42.16
CDX89921 Canola cytosol 40.19 42.16
PGSC0003DMT400042707 Potato cytosol 40.19 42.16
KRH31916 Soybean cytosol 37.38 42.11
Solyc09g074570.1.1 Tomato cytosol 41.12 41.51
KRH68130 Soybean cytosol, plastid 36.45 37.14
KRG96390 Soybean cytosol, plastid 35.51 36.19
KRH31915 Soybean cytosol, plastid 35.51 36.19
EER95872 Sorghum cytosol 48.6 31.33
Bra015532.1-P Field mustard cytosol 41.12 30.34
CDX97821 Canola mitochondrion 34.58 27.82
CDY71728 Canola cytosol 36.45 27.46
PGSC0003DMT400013650 Potato cytosol 36.45 13.22
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10EntrezGene:8066301UniProt:C5YPD2ProteinID:EES16095.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006091GO:GO:0008150GO:GO:0008152
GO:GO:0009055GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0022900GO:GO:0045454
GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:GlutaredoxinInterPro:Glutaredoxin_subgrInterPro:IPR002109ProteinID:OQU79242.1
EnsemblPlants:OQU79243ProteinID:OQU79243ProteinID:OQU79243.1PFAM:PF00462PRINTS:PR00160PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF98EnsemblPlantsGene:SORBI_3008G117600SUPFAM:SSF52833unigene:Sbi.4395TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI0001A88427RefSeq:XP_002442257.1:::
Description
hypothetical protein
Coordinates
chr8:+:52821183..52824493
Molecular Weight (calculated)
11308.2 Da
IEP (calculated)
7.445
GRAVY (calculated)
0.526
Length
107 amino acids
Sequence
(BLAST)
001: MERVMQLASE RAVVVFTLSS CCMCHSVTQL LVADLSVNAL VHELDRDPRG KDMERALLKM LGGGRGSAAV PAVFIGGKLV GGTNSVMSLH LAGELVPMLM
101: NAGALWV
Best Arabidopsis Sequence Match ( AT2G47880.1 )
(BLAST)
001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY
Arabidopsis Description
GRXC13Glutaredoxin-C13 [Source:UniProtKB/Swiss-Prot;Acc:O82255]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.