CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 3
mitochondrion 1
cytosol 2
plastid 2
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89393
EES05647
EES05874
EES07800
EES07899
EES10633
EES10933
KXG27287
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	EES05647	AT3G27960.1	21798944
AT4G15700.1	KXG27287	AT1G22920.1	21798944
AT4G15700.1	EER89393	AT1G73360.1	21798944
AT4G15700.1	EES05874	AT1G73360.1	21798944
AT4G15700.1	EES07899	AT2G05230.1	21798944
AT4G15700.1	EES10633	AT2G05230.1	21798944
AT4G15700.1	EES10933	AT2G05230.1	21798944
AT4G15700.1	KXG34016	AT2G05230.1	21798944
AT4G15700.1	OQU85000	AT2G05230.1	21798944
AT4G15700.1	EES07899	AT2G05250.1	21798944
AT4G15700.1	EES10633	AT2G05250.1	21798944
AT4G15700.1	EES10933	AT2G05250.1	21798944
AT4G15700.1	KXG34016	AT2G05250.1	21798944
AT4G15700.1	OQU85000	AT2G05250.1	21798944
AT4G15700.1	EES07800	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79243	Sorghum	cytosol	99.07	99.07
Zm00001d023870_P001	Maize	cytosol, extracellular	85.98	88.46
EES16092	Sorghum	cytosol	85.05	86.67
HORVU5Hr1G025610.1	Barley	cytosol	77.57	79.81
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	76.64	79.61
TraesCS5B01G100700.1	Wheat	cytosol	76.64	78.85
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	75.7	78.64
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	75.7	78.64
TraesCS5A01G094600.1	Wheat	cytosol	75.7	77.88
TraesCS5A01G094900.1	Wheat	extracellular	74.77	77.67
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	74.77	77.67
TraesCS5D01G106900.1	Wheat	cytosol	74.77	76.92
TraesCS5A01G095500.1	Wheat	cytosol	73.83	76.7
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	73.83	76.7
EES16096	Sorghum	cytosol	71.03	72.38
EES00746	Sorghum	cytosol	64.49	66.99
EES00745	Sorghum	cytosol	62.62	65.05
GSMUA_Achr11P...	Banana	cytosol, extracellular	62.62	65.05
EES08918	Sorghum	cytosol, plastid	63.55	64.76
EES08919	Sorghum	cytosol	65.42	64.22
GSMUA_Achr11P...	Banana	cytosol	61.68	64.08
KRH11237	Soybean	cytosol	60.75	63.73
GSMUA_Achr1P26720_001	Banana	cytosol	60.75	63.11
GSMUA_Achr5P00370_001	Banana	cytosol	60.75	63.11
EES16093	Sorghum	cytosol	61.68	62.86
KRH02215	Soybean	cytosol	58.88	61.76
KRH21036	Soybean	cytosol	58.88	61.76
GSMUA_Achr5P00380_001	Banana	extracellular	58.88	61.16
GSMUA_Achr7P03690_001	Banana	cytosol	58.88	61.16
GSMUA_Achr8P33660_001	Banana	cytosol	57.94	60.19
Bra023688.1-P	Field mustard	cytosol	57.01	59.8
KRH50911	Soybean	cytosol	57.01	59.8
EES17138	Sorghum	cytosol	58.88	59.43
GSMUA_AchrUn_...	Banana	cytosol, extracellular	57.01	59.22
EES02025	Sorghum	cytosol	58.88	58.88
Bra002171.1-P	Field mustard	cytosol	56.07	58.82
CDX70828	Canola	cytosol	56.07	58.82
CDX92597	Canola	cytosol	56.07	58.82
CDY02610	Canola	cytosol	56.07	58.82
CDY13904	Canola	cytosol	56.07	58.82
CDY68328	Canola	cytosol	56.07	58.82
VIT_05s0020g01750.t01	Wine grape	cytosol	56.07	58.25
Bra006467.1-P	Field mustard	cytosol	55.14	57.84
CDX88929	Canola	cytosol	55.14	57.84
Solyc01g067440.2.1	Tomato	cytosol	55.14	57.84
KRG96386	Soybean	cytosol	53.27	56.44
KRH71536	Soybean	extracellular	53.27	56.44
AT5G18600.1	Thale cress	cytosol	53.27	55.88
PGSC0003DMT400058325	Potato	cytosol	53.27	55.88
Solyc01g067460.1.1	Tomato	cytosol	53.27	55.88
VIT_05s0020g01760.t01	Wine grape	cytosol	53.27	55.88
KRH68125	Soybean	cytosol	52.34	55.45
Bra033504.1-P	Field mustard	cytosol	49.53	55.21
CDY54296	Canola	cytosol	52.34	54.9
KRH11238	Soybean	cytosol	52.34	54.9
PGSC0003DMT400058374	Potato	cytosol	52.34	54.9
AT4G15700.1	Thale cress	cytosol	51.4	53.92
Bra012773.1-P	Field mustard	cytosol	51.4	53.92
CDX90576	Canola	cytosol	51.4	53.92
CDY09747	Canola	cytosol	51.4	53.92
CDY66332	Canola	cytosol	51.4	53.92
KRG96387	Soybean	cytosol	51.4	53.92
KRH21035	Soybean	cytosol	51.4	53.92
KRH31918	Soybean	cytosol	51.4	53.92
KRH68127	Soybean	cytosol	51.4	53.92
KRH71537	Soybean	cytosol	51.4	53.92
KRH31919	Soybean	cytosol, plasma membrane	50.47	53.47
Bra004424.1-P	Field mustard	cytosol	50.47	52.94
Bra033503.1-P	Field mustard	cytosol	50.47	52.94
CDX80139	Canola	cytosol	50.47	52.94
CDY53024	Canola	cytosol	50.47	52.94
CDY66333	Canola	cytosol	50.47	52.94
PGSC0003DMT400029525	Potato	cytosol	50.47	52.94
PGSC0003DMT400041381	Potato	cytosol, plastid	50.47	52.94
VIT_07s0104g01390.t01	Wine grape	plasma membrane	50.47	52.94
AT2G47870.1	Thale cress	cytosol	50.47	52.43
AT3G21460.1	Thale cress	mitochondrion	49.53	51.96
AT4G15660.1	Thale cress	cytosol, extracellular	49.53	51.96
AT4G15680.1	Thale cress	cytosol	49.53	51.96
AT4G15690.1	Thale cress	cytosol	49.53	51.96
Bra033501.1-P	Field mustard	cytosol	49.53	51.96
KRH50912	Soybean	cytosol	49.53	51.96
PGSC0003DMT400029597	Potato	cytosol	49.53	51.96
Solyc09g074590.1.1	Tomato	cytosol	49.53	51.96
Solyc09g074600.1.1	Tomato	cytosol	49.53	51.96
Bra004426.1-P	Field mustard	cytosol	49.53	51.46
CDX80138	Canola	cytosol	49.53	51.46
CDY53023	Canola	cytosol	49.53	51.46
PGSC0003DMT400042706	Potato	cytosol	49.53	51.46
Bra033499.1-P	Field mustard	cytosol	46.73	51.02
AT2G47880.1	Thale cress	cytosol	48.6	50.98
AT4G15670.1	Thale cress	cytosol	48.6	50.98
Bra001831.1-P	Field mustard	cytosol	48.6	50.98
CDX95739	Canola	cytosol	48.6	50.98
CDY22746	Canola	cytosol	48.6	50.98
CDY32430	Canola	cytosol, plastid	48.6	50.98
CDY32431	Canola	cytosol	48.6	50.98
CDY48891	Canola	cytosol	48.6	50.98
CDY54294	Canola	cytosol	48.6	50.98
Solyc04g011790.1.1	Tomato	cytosol, plastid	48.6	50.98
Solyc06g008750.1.1	Tomato	cytosol	48.6	50.98
Bra038076.1-P	Field mustard	cytosol, extracellular	47.66	50.49
CDY09078	Canola	cytosol, extracellular	47.66	50.49
CDY22745	Canola	cytosol, extracellular	47.66	50.49
Solyc06g008760.1.1	Tomato	cytosol	47.66	50.49
CDY27469	Canola	cytosol	49.53	50.48
CDY55528	Canola	cytosol	49.53	50.48
Bra001830.1-P	Field mustard	cytosol, plastid	47.66	50.0
Bra038075.1-P	Field mustard	cytosol	47.66	50.0
CDY48890	Canola	cytosol, plastid	47.66	50.0
CDY69190	Canola	cytosol	48.6	50.0
PGSC0003DMT400013649	Potato	cytosol	47.66	50.0
PGSC0003DMT400029596	Potato	cytosol	47.66	50.0
PGSC0003DMT400041380	Potato	cytosol, plastid	47.66	50.0
Bra021444.1-P	Field mustard	cytosol	48.6	49.52
AT1G06830.1	Thale cress	cytosol	45.79	49.49
Bra031540.1-P	Field mustard	cytosol	45.79	49.49
CDY06230	Canola	cytosol	45.79	49.49
CDY09953	Canola	cytosol	45.79	49.49
Bra023883.1-P	Field mustard	cytosol, plastid	46.73	49.02
CDY19270	Canola	cytosol, plastid	46.73	49.02
CDY37292	Canola	cytosol, plastid	46.73	49.02
PGSC0003DMT400027946	Potato	cytosol, plastid	46.73	49.02
PGSC0003DMT400041378	Potato	cytosol, plastid	46.73	49.02
PGSC0003DMT400041382	Potato	cytosol	46.73	49.02
Solyc04g011830.1.1	Tomato	cytosol, plastid	46.73	49.02
Solyc04g011850.1.1	Tomato	cytosol	46.73	49.02
Solyc04g011870.1.1	Tomato	cytosol, plastid	46.73	49.02
Solyc09g074580.1.1	Tomato	cytosol	46.73	49.02
CDY10229	Canola	cytosol	44.86	48.48
PGSC0003DMT400079099	Potato	cytosol	43.93	48.45
Solyc04g011820.1.1	Tomato	cytosol	42.99	48.42
EES05136	Sorghum	cytosol	57.94	48.06
Bra007717.1-P	Field mustard	cytosol	34.58	48.05
AT3G62960.1	Thale cress	cytosol	45.79	48.04
Bra007718.1-P	Field mustard	cytosol	45.79	48.04
CDX76678	Canola	cytosol	45.79	48.04
CDY09079	Canola	cytosol	45.79	48.04
CDY11466	Canola	cytosol	45.79	48.04
PGSC0003DMT400027947	Potato	cytosol, plastid	45.79	48.04
PGSC0003DMT400027948	Potato	cytosol, plastid	45.79	48.04
PGSC0003DMT400027950	Potato	cytosol, plastid	45.79	48.04
PGSC0003DMT400027951	Potato	cytosol, plastid	45.79	48.04
Solyc04g011810.1.1	Tomato	cytosol, plastid	45.79	48.04
VIT_07s0104g01400.t01	Wine grape	cytosol	45.79	48.04
Solyc06g054570.1.1	Tomato	cytosol	45.79	47.57
PGSC0003DMT400027953	Potato	cytosol, plastid	44.86	47.52
PGSC0003DMT400027952	Potato	cytosol	42.06	47.37
PGSC0003DMT400041379	Potato	cytosol, plastid	42.06	47.37
AT2G30540.1	Thale cress	cytosol	44.86	47.06
Bra014379.1-P	Field mustard	cytosol	44.86	47.06
CDX89162	Canola	cytosol	44.86	47.06
CDY68061	Canola	cytosol	44.86	47.06
KRH31917	Soybean	cytosol	44.86	47.06
PGSC0003DMT400027949	Potato	cytosol, plastid	44.86	47.06
PGSC0003DMT400027954	Potato	cytosol, plastid	44.86	47.06
Solyc04g011800.1.1	Tomato	cytosol, plastid	44.86	47.06
Solyc04g011840.1.1	Tomato	cytosol	44.86	47.06
Solyc04g011860.1.1	Tomato	cytosol, plastid	44.86	47.06
AT3G62950.1	Thale cress	cytosol	44.86	46.6
Bra014380.1-P	Field mustard	cytosol	44.86	46.6
CDX89161	Canola	cytosol	44.86	46.6
CDY54881	Canola	cytosol	42.99	46.46
Bra003517.1-P	Field mustard	cytosol, extracellular	43.93	46.08
Bra021641.1-P	Field mustard	cytosol	43.93	46.08
CDY23990	Canola	cytosol	43.93	46.08
CDY29666	Canola	cytosol	43.93	46.08
CDY52638	Canola	cytosol	43.93	46.08
KRH68129	Soybean	cytosol	43.93	46.08
KRH71538	Soybean	cytosol	43.93	46.08
Solyc04g011780.1.1	Tomato	extracellular	43.93	46.08
CDX76677	Canola	cytosol	43.93	45.63
CDY11464	Canola	cytosol	43.93	45.63
CDY11465	Canola	cytosol	43.93	45.63
VIT_07s0104g01420.t01	Wine grape	cytosol	44.86	45.28
AT1G03020.1	Thale cress	cytosol	42.99	45.1
Bra014382.1-P	Field mustard	cytosol	42.99	45.1
Bra018307.1-P	Field mustard	cytosol	42.99	45.1
CDX76675	Canola	cytosol	42.99	45.1
CDX84825	Canola	cytosol	42.99	45.1
CDX89159	Canola	cytosol	42.99	45.1
CDX93949	Canola	cytosol	42.99	45.1
CDY10745	Canola	cytosol	42.99	45.1
KRG96389	Soybean	cytosol	42.99	45.1
Solyc04g011880.1.1	Tomato	cytosol, plastid	42.99	45.1
Solyc05g051730.1.1	Tomato	cytosol	42.99	44.66
PGSC0003DMT400077394	Potato	cytosol	42.99	44.23
Solyc05g051720.1.1	Tomato	cytosol	42.99	44.23
AT3G62930.1	Thale cress	cytosol	42.06	44.12
Bra003515.1-P	Field mustard	cytosol	42.06	44.12
Bra007714.1-P	Field mustard	cytosol	42.06	44.12
CDX67910	Canola	cytosol	42.06	44.12
CDX97824	Canola	cytosol	42.06	44.12
CDY11462	Canola	cytosol	42.06	44.12
EES10652	Sorghum	cytosol	56.07	43.8
PGSC0003DMT400077393	Potato	cytosol	42.06	43.69
Bra032563.1-P	Field mustard	cytosol	41.12	43.14
CDY18141	Canola	cytosol	41.12	43.14
CDY25124	Canola	cytosol	41.12	43.14
CDY32493	Canola	cytosol	41.12	43.14
Solyc04g053110.1.1	Tomato	cytosol	41.12	43.14
Bra033366.1-P	Field mustard	cytosol	40.19	42.16
CDX89921	Canola	cytosol	40.19	42.16
PGSC0003DMT400042707	Potato	cytosol	40.19	42.16
KRH31916	Soybean	cytosol	37.38	42.11
PGSC0003DMT400029673	Potato	cytosol	41.12	41.51
Solyc09g074570.1.1	Tomato	cytosol	40.19	40.57
KRH68130	Soybean	cytosol, plastid	36.45	37.14
KRG96390	Soybean	cytosol, plastid	35.51	36.19
KRH31915	Soybean	cytosol, plastid	35.51	36.19
EER95872	Sorghum	cytosol	47.66	30.72
Bra015532.1-P	Field mustard	cytosol	40.19	29.66
CDX97821	Canola	mitochondrion	34.58	27.82
CDY71728	Canola	cytosol	35.51	26.76
PGSC0003DMT400013650	Potato	cytosol	35.51	12.88

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EntrezGene:8067246	UniProt:C5YPD7	EnsemblPlants:EES16097	ProteinID:EES16097
ProteinID:EES16097.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:Glutaredoxin_subgr
InterPro:IPR002109	PFAM:PF00462	PRINTS:PR00160	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF98
EnsemblPlantsGene:SORBI_3008G117900	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A88429	RefSeq:XP_002442259.1

Description

hypothetical protein

Coordinates

chr8:+:52979837..52980295

Molecular Weight (calculated)

11326.2 Da

IEP (calculated)

7.445

GRAVY (calculated)

0.508

Length

107 amino acids

Sequence
(BLAST)

001: MERVMQLASE RAVVVFTLSS CCMCHSVTQL LVADMSVNAL VHELDRDPRG KDMERALLKM LGGGRGSAAV PAVFIGGKLV GGTNSVMSLH LAGELVPMLM
101: NAGALWV

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.