CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 4
extracellular 3
endoplasmic reticulum 3
plasma membrane 3
golgi 3
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89393
EES05647
EES05874
EES07800
EES07899
EES10633
EES10933
KXG27287
KXG34016
OQU85000

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	EES05647	AT3G27960.1	21798944
AT4G15700.1	KXG27287	AT1G22920.1	21798944
AT4G15700.1	EER89393	AT1G73360.1	21798944
AT4G15700.1	EES05874	AT1G73360.1	21798944
AT4G15700.1	EES07899	AT2G05230.1	21798944
AT4G15700.1	EES10633	AT2G05230.1	21798944
AT4G15700.1	EES10933	AT2G05230.1	21798944
AT4G15700.1	KXG34016	AT2G05230.1	21798944
AT4G15700.1	OQU85000	AT2G05230.1	21798944
AT4G15700.1	EES07899	AT2G05250.1	21798944
AT4G15700.1	EES10633	AT2G05250.1	21798944
AT4G15700.1	EES10933	AT2G05250.1	21798944
AT4G15700.1	KXG34016	AT2G05250.1	21798944
AT4G15700.1	OQU85000	AT2G05250.1	21798944
AT4G15700.1	EES07800	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023873_P001	Maize	cytosol	97.14	98.08
HORVU5Hr1G025610.1	Barley	cytosol	85.71	86.54
TraesCS5A01G094600.1	Wheat	cytosol	85.71	86.54
OQU79243	Sorghum	cytosol	87.62	85.98
TraesCS5B01G100700.1	Wheat	cytosol	84.76	85.58
TraesCS5D01G106900.1	Wheat	cytosol	84.76	85.58
EES16097	Sorghum	cytosol	86.67	85.05
HORVU5Hr1G025710.1	Barley	cytosol, extracellular	81.9	83.5
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	81.9	83.5
TraesCS5D01G108100.1	Wheat	cytosol, extracellular	81.9	83.5
TraesCS5A01G094900.1	Wheat	extracellular	80.95	82.52
TraesCS5D01G107500.1	Wheat	cytosol, extracellular	80.95	82.52
TraesCS5A01G095500.1	Wheat	cytosol	80.0	81.55
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	80.0	81.55
EES16096	Sorghum	cytosol	75.24	75.24
GSMUA_Achr11P...	Banana	cytosol, extracellular	68.57	69.9
EES00746	Sorghum	cytosol	67.62	68.93
EES08919	Sorghum	cytosol	70.48	67.89
GSMUA_Achr11P...	Banana	cytosol	65.71	66.99
GSMUA_Achr5P00370_001	Banana	cytosol	64.76	66.02
GSMUA_Achr5P00380_001	Banana	extracellular	64.76	66.02
EES16093	Sorghum	cytosol	65.71	65.71
GSMUA_Achr1P26720_001	Banana	cytosol	63.81	65.05
EES08918	Sorghum	cytosol, plastid	63.81	63.81
KRH02215	Soybean	cytosol	61.9	63.73
KRH11237	Soybean	cytosol	61.9	63.73
EES00745	Sorghum	cytosol	61.9	63.11
GSMUA_Achr7P03690_001	Banana	cytosol	61.9	63.11
KRH50911	Soybean	cytosol	60.95	62.75
EES17138	Sorghum	cytosol	62.86	62.26
GSMUA_Achr8P33660_001	Banana	cytosol	60.95	62.14
GSMUA_AchrUn_...	Banana	cytosol, extracellular	60.95	62.14
Bra023688.1-P	Field mustard	cytosol	60.0	61.76
KRH21036	Soybean	cytosol	60.0	61.76
Bra006467.1-P	Field mustard	cytosol	59.05	60.78
CDX70828	Canola	cytosol	59.05	60.78
CDX88929	Canola	cytosol	59.05	60.78
CDY02610	Canola	cytosol	59.05	60.78
CDY68328	Canola	cytosol	59.05	60.78
Solyc01g067440.2.1	Tomato	cytosol	59.05	60.78
EES02025	Sorghum	cytosol	61.9	60.75
VIT_05s0020g01750.t01	Wine grape	cytosol	59.05	60.19
AT4G15700.1	Thale cress	cytosol	58.1	59.8
Bra002171.1-P	Field mustard	cytosol	58.1	59.8
CDX92597	Canola	cytosol	58.1	59.8
CDY13904	Canola	cytosol	58.1	59.8
PGSC0003DMT400058325	Potato	cytosol	58.1	59.8
Solyc01g067460.1.1	Tomato	cytosol	58.1	59.8
PGSC0003DMT400058374	Potato	cytosol	57.14	58.82
VIT_05s0020g01760.t01	Wine grape	cytosol	57.14	58.82
KRG96386	Soybean	cytosol	56.19	58.42
KRH71536	Soybean	extracellular	56.19	58.42
AT4G15660.1	Thale cress	cytosol, extracellular	56.19	57.84
AT5G18600.1	Thale cress	cytosol	56.19	57.84
Bra033503.1-P	Field mustard	cytosol	56.19	57.84
CDY66333	Canola	cytosol	56.19	57.84
KRH68125	Soybean	cytosol	55.24	57.43
AT4G15670.1	Thale cress	cytosol	55.24	56.86
AT4G15680.1	Thale cress	cytosol	55.24	56.86
AT4G15690.1	Thale cress	cytosol	55.24	56.86
Bra033501.1-P	Field mustard	cytosol	55.24	56.86
KRH11238	Soybean	cytosol	55.24	56.86
Bra033504.1-P	Field mustard	cytosol	51.43	56.25
Bra012773.1-P	Field mustard	cytosol	54.29	55.88
CDX90576	Canola	cytosol	54.29	55.88
CDY09747	Canola	cytosol	54.29	55.88
CDY22746	Canola	cytosol	54.29	55.88
CDY54294	Canola	cytosol	54.29	55.88
CDY66332	Canola	cytosol	54.29	55.88
KRH21035	Soybean	cytosol	54.29	55.88
PGSC0003DMT400029525	Potato	cytosol	54.29	55.88
KRH31919	Soybean	cytosol, plasma membrane	53.33	55.45
Bra038075.1-P	Field mustard	cytosol	53.33	54.9
CDY54296	Canola	cytosol	53.33	54.9
KRH50912	Soybean	cytosol	53.33	54.9
PGSC0003DMT400029597	Potato	cytosol	53.33	54.9
Solyc09g074590.1.1	Tomato	cytosol	53.33	54.9
Solyc09g074600.1.1	Tomato	cytosol	53.33	54.9
VIT_07s0104g01390.t01	Wine grape	plasma membrane	53.33	54.9
Bra038076.1-P	Field mustard	cytosol, extracellular	52.38	54.46
CDY09078	Canola	cytosol, extracellular	52.38	54.46
CDY22745	Canola	cytosol, extracellular	52.38	54.46
AT2G47870.1	Thale cress	cytosol	53.33	54.37
Bra033499.1-P	Field mustard	cytosol	50.48	54.08
Bra004424.1-P	Field mustard	cytosol	52.38	53.92
CDX80139	Canola	cytosol	52.38	53.92
CDY53024	Canola	cytosol	52.38	53.92
CDY69190	Canola	cytosol	53.33	53.85
Solyc06g008760.1.1	Tomato	cytosol	51.43	53.47
AT3G21460.1	Thale cress	mitochondrion	51.43	52.94
CDY09079	Canola	cytosol	51.43	52.94
KRG96387	Soybean	cytosol	51.43	52.94
KRH31918	Soybean	cytosol	51.43	52.94
KRH68127	Soybean	cytosol	51.43	52.94
KRH71537	Soybean	cytosol	51.43	52.94
AT1G06830.1	Thale cress	cytosol	49.52	52.53
CDY53023	Canola	cytosol	51.43	52.43
CDY27469	Canola	cytosol	52.38	52.38
AT2G47880.1	Thale cress	cytosol	50.48	51.96
Bra001831.1-P	Field mustard	cytosol	50.48	51.96
CDY32430	Canola	cytosol, plastid	50.48	51.96
CDY32431	Canola	cytosol	50.48	51.96
CDY48891	Canola	cytosol	50.48	51.96
PGSC0003DMT400041381	Potato	cytosol, plastid	50.48	51.96
Solyc06g008750.1.1	Tomato	cytosol	50.48	51.96
Bra031540.1-P	Field mustard	cytosol	48.57	51.52
CDY06230	Canola	cytosol	48.57	51.52
CDY09953	Canola	cytosol	48.57	51.52
CDY10229	Canola	cytosol	48.57	51.52
Bra004426.1-P	Field mustard	cytosol	50.48	51.46
CDX80138	Canola	cytosol	50.48	51.46
CDY55528	Canola	cytosol	51.43	51.43
Bra001830.1-P	Field mustard	cytosol, plastid	49.52	50.98
CDX95739	Canola	cytosol	49.52	50.98
CDY48890	Canola	cytosol, plastid	49.52	50.98
PGSC0003DMT400013649	Potato	cytosol	49.52	50.98
PGSC0003DMT400079099	Potato	cytosol	46.67	50.52
PGSC0003DMT400042706	Potato	cytosol	49.52	50.49
Solyc06g054570.1.1	Tomato	cytosol	49.52	50.49
Bra021444.1-P	Field mustard	cytosol	50.48	50.48
AT2G30540.1	Thale cress	cytosol	48.57	50.0
AT3G62960.1	Thale cress	cytosol	48.57	50.0
Bra007718.1-P	Field mustard	cytosol	48.57	50.0
Bra023883.1-P	Field mustard	cytosol, plastid	48.57	50.0
CDX76678	Canola	cytosol	48.57	50.0
CDY11466	Canola	cytosol	48.57	50.0
CDY19270	Canola	cytosol, plastid	48.57	50.0
CDY37292	Canola	cytosol, plastid	48.57	50.0
PGSC0003DMT400029596	Potato	cytosol	48.57	50.0
Solyc04g011790.1.1	Tomato	cytosol, plastid	48.57	50.0
EES05136	Sorghum	cytosol	60.95	49.61
CDY54881	Canola	cytosol	46.67	49.49
PGSC0003DMT400041379	Potato	cytosol, plastid	44.76	49.47
Bra014379.1-P	Field mustard	cytosol	47.62	49.02
Bra021641.1-P	Field mustard	cytosol	47.62	49.02
CDX89162	Canola	cytosol	47.62	49.02
CDY23990	Canola	cytosol	47.62	49.02
CDY29666	Canola	cytosol	47.62	49.02
CDY52638	Canola	cytosol	47.62	49.02
CDY68061	Canola	cytosol	47.62	49.02
PGSC0003DMT400041380	Potato	cytosol, plastid	47.62	49.02
Solyc04g011870.1.1	Tomato	cytosol, plastid	47.62	49.02
Solyc09g074580.1.1	Tomato	cytosol	47.62	49.02
VIT_07s0104g01400.t01	Wine grape	cytosol	47.62	49.02
AT3G62950.1	Thale cress	cytosol	47.62	48.54
Bra014380.1-P	Field mustard	cytosol	47.62	48.54
CDX89161	Canola	cytosol	47.62	48.54
Bra007717.1-P	Field mustard	cytosol	35.24	48.05
Bra003517.1-P	Field mustard	cytosol, extracellular	46.67	48.04
Bra018307.1-P	Field mustard	cytosol	46.67	48.04
CDX84825	Canola	cytosol	46.67	48.04
CDY10745	Canola	cytosol	46.67	48.04
PGSC0003DMT400027946	Potato	cytosol, plastid	46.67	48.04
PGSC0003DMT400041382	Potato	cytosol	46.67	48.04
Solyc04g011830.1.1	Tomato	cytosol, plastid	46.67	48.04
Solyc04g011850.1.1	Tomato	cytosol	46.67	48.04
CDX76677	Canola	cytosol	46.67	47.57
CDY11464	Canola	cytosol	46.67	47.57
CDY11465	Canola	cytosol	46.67	47.57
Solyc04g011820.1.1	Tomato	cytosol	42.86	47.37
CDX97824	Canola	cytosol	45.71	47.06
KRH31917	Soybean	cytosol	45.71	47.06
PGSC0003DMT400027948	Potato	cytosol, plastid	45.71	47.06
PGSC0003DMT400027950	Potato	cytosol, plastid	45.71	47.06
PGSC0003DMT400027951	Potato	cytosol, plastid	45.71	47.06
Solyc04g011810.1.1	Tomato	cytosol, plastid	45.71	47.06
Solyc04g011860.1.1	Tomato	cytosol, plastid	45.71	47.06
PGSC0003DMT400027953	Potato	cytosol, plastid	44.76	46.53
PGSC0003DMT400027952	Potato	cytosol	41.9	46.32
KRH68129	Soybean	cytosol	44.76	46.08
KRH71538	Soybean	cytosol	44.76	46.08
PGSC0003DMT400027947	Potato	cytosol, plastid	44.76	46.08
PGSC0003DMT400027949	Potato	cytosol, plastid	44.76	46.08
PGSC0003DMT400027954	Potato	cytosol, plastid	44.76	46.08
PGSC0003DMT400041378	Potato	cytosol, plastid	44.76	46.08
Solyc04g011800.1.1	Tomato	cytosol, plastid	44.76	46.08
Solyc04g011840.1.1	Tomato	cytosol	44.76	46.08
PGSC0003DMT400029673	Potato	cytosol	45.71	45.28
EES10652	Sorghum	cytosol	59.05	45.26
Bra032563.1-P	Field mustard	cytosol	43.81	45.1
CDY32493	Canola	cytosol	43.81	45.1
KRG96389	Soybean	cytosol	43.81	45.1
Solyc04g011780.1.1	Tomato	extracellular	43.81	45.1
Solyc04g011880.1.1	Tomato	cytosol, plastid	43.81	45.1
VIT_07s0104g01420.t01	Wine grape	cytosol	44.76	44.34
AT1G03020.1	Thale cress	cytosol	42.86	44.12
CDY18141	Canola	cytosol	42.86	44.12
Solyc05g051730.1.1	Tomato	cytosol	42.86	43.69
Solyc09g074570.1.1	Tomato	cytosol	43.81	43.4
PGSC0003DMT400077394	Potato	cytosol	42.86	43.27
Solyc05g051720.1.1	Tomato	cytosol	42.86	43.27
Bra003515.1-P	Field mustard	cytosol	41.9	43.14
Bra014382.1-P	Field mustard	cytosol	41.9	43.14
Bra033366.1-P	Field mustard	cytosol	41.9	43.14
CDX67910	Canola	cytosol	41.9	43.14
CDX76675	Canola	cytosol	41.9	43.14
CDX89159	Canola	cytosol	41.9	43.14
CDX89921	Canola	cytosol	41.9	43.14
CDX93949	Canola	cytosol	41.9	43.14
PGSC0003DMT400077393	Potato	cytosol	41.9	42.72
AT3G62930.1	Thale cress	cytosol	40.95	42.16
Bra007714.1-P	Field mustard	cytosol	40.95	42.16
CDY11462	Canola	cytosol	40.95	42.16
CDY25124	Canola	cytosol	40.95	42.16
Solyc04g053110.1.1	Tomato	cytosol	40.0	41.18
KRH31916	Soybean	cytosol	37.14	41.05
PGSC0003DMT400042707	Potato	cytosol	39.05	40.2
KRH68130	Soybean	cytosol, plastid	38.1	38.1
KRG96390	Soybean	cytosol, plastid	37.14	37.14
KRH31915	Soybean	cytosol, plastid	35.24	35.24
EER95872	Sorghum	cytosol	51.43	32.53
Bra015532.1-P	Field mustard	cytosol	43.81	31.72
CDY71728	Canola	cytosol	39.05	28.87
CDX97821	Canola	mitochondrion	35.24	27.82
PGSC0003DMT400013650	Potato	cytosol	39.05	13.9

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	UniProt:C5YPC9	EnsemblPlants:EES16092	ProteinID:EES16092	ProteinID:EES16092.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF98	EnsemblPlantsGene:SORBI_3008G117300	SUPFAM:SSF52833	TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A88425	RefSeq:XP_002442254.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:52741409..52741726

Molecular Weight (calculated)

11235.1 Da

IEP (calculated)

8.525

GRAVY (calculated)

0.394

Length

105 amino acids

Sequence
(BLAST)

001: MERVMKIASE RAVVVFTLSS CCMCHTVTQL MADQLSVNAL VHELDSDPRG KDMERALLKM LGGRGPAVPA VFIGGKLVGG TNRVMSLHLA GELVPMLKSA
101: GALWL

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.