Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016593_P001 | Maize | cytosol | 97.67 | 96.92 |
| Os02t0512400-01 | Rice | cytosol | 96.12 | 91.85 |
| EES10652 | Sorghum | cytosol | 85.27 | 80.29 |
| GSMUA_Achr10P... | Banana | cytosol | 77.52 | 74.07 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 75.19 | 72.93 |
| GSMUA_Achr6P23860_001 | Banana | plastid | 75.19 | 71.32 |
| KRG94592 | Soybean | plastid | 72.87 | 71.21 |
| KRH06898 | Soybean | plastid | 72.87 | 70.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.54 | 70.0 |
| Solyc05g015910.1.1 | Tomato | cytosol | 67.44 | 66.41 |
| KRH70543 | Soybean | cytosol | 68.22 | 66.17 |
| EES00746 | Sorghum | cytosol | 52.71 | 66.02 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 61.24 | 65.83 |
| PGSC0003DMT400006076 | Potato | plastid | 68.22 | 65.67 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 60.47 | 65.0 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 59.69 | 64.17 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 58.91 | 63.33 |
| EES02025 | Sorghum | cytosol | 51.94 | 62.62 |
| AT3G02000.1 | Thale cress | cytosol | 65.89 | 62.5 |
| CDX74327 | Canola | cytosol | 65.12 | 61.31 |
| Bra000980.1-P | Field mustard | cytosol | 65.12 | 61.31 |
| CDX91918 | Canola | cytosol | 63.57 | 61.19 |
| EES16092 | Sorghum | cytosol | 49.61 | 60.95 |
| KRH01571 | Soybean | cytosol | 66.67 | 60.56 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 60.47 | 60.0 |
| PGSC0003DMT400013430 | Potato | cytosol | 59.69 | 59.23 |
| EES00745 | Sorghum | cytosol | 47.29 | 59.22 |
| EES17138 | Sorghum | cytosol | 48.06 | 58.49 |
| CDX85614 | Canola | cytosol | 62.02 | 58.39 |
| CDX70540 | Canola | cytosol | 62.02 | 58.39 |
| Bra023448.1-P | Field mustard | cytosol | 62.02 | 58.39 |
| Bra006236.1-P | Field mustard | cytosol | 61.24 | 58.09 |
| EES16097 | Sorghum | cytosol | 48.06 | 57.94 |
| AT5G14070.1 | Thale cress | cytosol | 62.79 | 57.86 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 69.77 | 57.69 |
| CDX78558 | Canola | cytosol | 61.24 | 57.66 |
| EES16093 | Sorghum | cytosol | 46.51 | 57.14 |
| OQU79243 | Sorghum | cytosol | 47.29 | 57.01 |
| CDX91084 | Canola | cytosol | 60.47 | 56.93 |
| EES08918 | Sorghum | cytosol, plastid | 45.74 | 56.19 |
| Bra008782.1-P | Field mustard | cytosol | 58.14 | 55.97 |
| EES08919 | Sorghum | cytosol | 46.51 | 55.05 |
| EES16096 | Sorghum | cytosol | 41.09 | 50.48 |
| CDX69609 | Canola | cytosol | 38.76 | 49.51 |
| EER95872 | Sorghum | cytosol | 55.04 | 42.77 |
| CDY58422 | Canola | cytosol | 48.84 | 37.5 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | EntrezGene:8056789 | UniProt:C5XSN4 | EnsemblPlants:EES05136 | ProteinID:EES05136 |
| ProteinID:EES05136.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:IPR002109 |
| PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | EnsemblPlantsGene:SORBI_3004G156900 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001A8566A | RefSeq:XP_002452160.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:49541926..49543116
Molecular Weight (calculated)
13693.9 Da
IEP (calculated)
7.454
GRAVY (calculated)
0.468
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MQYAAAEQAW YMPAATTMAE SAVARVERLA SESAVVVFSV SSCCMCHAVK RLFCGMGVHP TVHELDLDPR GRELERALAR LLGYGPAGAP VVPVVFIGGK
101: LVGAMDRVMA AHINGSLVPL LKEAGALWL
101: LVGAMDRVMA AHINGSLVPL LKEAGALWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.