Factsheet for Bra000980.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 2
cytosol 2
plastid 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004329.1-P
Bra015646.1-P
Bra016389.1-P
Bra028713.1-P
Bra031364.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02000.1	Bra016389.1-P	AT1G22070.1	19218396
AT3G02000.1	Bra031364.1-P	AT1G22070.1	19218396
AT3G02000.1	Bra004329.1-P	AT1G68640.1	19218396
AT3G02000.1	Bra015646.1-P	AT1G77920.1	19218396
AT3G02000.1	Bra028713.1-P	AT5G06960.1	19218396

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74327	Canola	cytosol	100.0	100.0
CDX91918	Canola	cytosol	96.35	98.51
AT3G02000.1	Thale cress	cytosol	91.24	91.91
Bra006236.1-P	Field mustard	cytosol	76.64	77.21
Bra023448.1-P	Field mustard	cytosol	73.72	73.72
Bra008782.1-P	Field mustard	cytosol	71.53	73.13
EES05136	Sorghum	cytosol	61.31	65.12
Os04t0393500-01	Rice	cytosol	62.77	63.7
Zm00001d016593_P001	Maize	cytosol	59.85	63.08
TraesCS2A01G285600.1	Wheat	cytosol, extracellular	61.31	62.69
HORVU0Hr1G003840.1	Barley	extracellular	61.31	62.69
GSMUA_AchrUn_...	Banana	cytosol	59.12	62.31
TraesCS2D01G284300.1	Wheat	cytosol, extracellular	60.58	61.94
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	60.58	61.94
GSMUA_Achr10P...	Banana	cytosol	60.58	61.48
GSMUA_Achr6P23860_001	Banana	plastid	60.58	61.03
GSMUA_Achr3P18710_001	Banana	cytosol	59.12	60.9
Os02t0512400-01	Rice	cytosol	59.85	60.74
PGSC0003DMT400013427	Potato	mitochondrion, plastid	52.55	60.0
EES10652	Sorghum	cytosol	59.85	59.85
KRG94592	Soybean	plastid	57.66	59.85
Solyc05g015910.1.1	Tomato	cytosol	56.93	59.54
PGSC0003DMT400013435	Potato	cytosol, plastid	51.82	59.17
Zm00001d003927_P001	Maize	cytosol	59.12	59.12
KRH06898	Soybean	plastid	57.66	58.96
Bra001830.1-P	Field mustard	cytosol, plastid	43.8	58.82
Solyc01g009910.1.1	Tomato	mitochondrion, plastid	51.09	58.33
Solyc01g009900.2.1	Tomato	cytosol, plastid	51.09	58.33
Bra001831.1-P	Field mustard	cytosol	42.34	56.86
PGSC0003DMT400006076	Potato	plastid	55.47	56.72
KRH70543	Soybean	cytosol	54.74	56.39
Bra023883.1-P	Field mustard	cytosol, plastid	41.61	55.88
Bra023688.1-P	Field mustard	cytosol	40.88	54.9
Solyc01g009890.1.1	Tomato	cytosol, plastid	51.82	54.62
PGSC0003DMT400013430	Potato	cytosol	51.82	54.62
Bra033504.1-P	Field mustard	cytosol	37.96	54.17
Bra002171.1-P	Field mustard	cytosol	40.15	53.92
Bra033501.1-P	Field mustard	cytosol	39.42	52.94
Bra033503.1-P	Field mustard	cytosol	39.42	52.94
Bra006467.1-P	Field mustard	cytosol	39.42	52.94
KRH01571	Soybean	cytosol	54.01	52.11
Bra012773.1-P	Field mustard	cytosol	37.96	50.98
VIT_01s0146g00220.t01	Wine grape	cytosol	56.93	50.0
Bra038075.1-P	Field mustard	cytosol	36.5	49.02
Bra004426.1-P	Field mustard	cytosol	36.5	48.54
Bra038076.1-P	Field mustard	cytosol, extracellular	35.77	48.51
Bra031540.1-P	Field mustard	cytosol	35.04	48.48
Bra007717.1-P	Field mustard	cytosol	27.01	48.05
Bra033499.1-P	Field mustard	cytosol	34.31	47.96
Bra014380.1-P	Field mustard	cytosol	35.77	47.57
Bra021641.1-P	Field mustard	cytosol	35.04	47.06
Bra018307.1-P	Field mustard	cytosol	34.31	46.08
Bra004424.1-P	Field mustard	cytosol	33.58	45.1
Bra014382.1-P	Field mustard	cytosol	32.12	43.14
Bra007718.1-P	Field mustard	cytosol	32.12	43.14
Bra021444.1-P	Field mustard	cytosol	32.85	42.86
Bra003515.1-P	Field mustard	cytosol	31.39	42.16
Bra014379.1-P	Field mustard	cytosol	31.39	42.16
Bra007714.1-P	Field mustard	cytosol	30.66	41.18
Bra003517.1-P	Field mustard	cytosol, extracellular	30.66	41.18
Bra032563.1-P	Field mustard	cytosol	29.93	40.2
Bra033366.1-P	Field mustard	cytosol	29.93	40.2
Bra015532.1-P	Field mustard	cytosol	32.85	31.03

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra000980	EnsemblPlants:Bra000980.1	EnsemblPlants:Bra000980.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006091	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009058	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0045892	GO:GO:0048441
GO:GO:0048448	GO:GO:0048451	GO:GO:0055114	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109
UniProt:M4C9V1	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF128	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	UniParc:UPI000254077E	:	:	:

Description

AT3G02000 (E=3e-069) ROXY1 | ROXY1; disulfide oxidoreductase

Coordinates

chrA03:+:14268954..14269367

Molecular Weight (calculated)

14294.6 Da

IEP (calculated)

6.915

GRAVY (calculated)

0.499

Length

137 amino acids

Sequence
(BLAST)

001: MQYQTESWGS YKMSNIGFGG DVGLAADTSL LRLESLVAES AVVIFSVSTC CMCHAVKGLF RGMGVSPAVH ELDLHPYGGD IQRALIRLLG CSGASSPGAL
101: PVVFIGGKLV GAMDRVMASH INGSLVPLLK DAGALWL

Best Arabidopsis Sequence Match ( AT3G02000.1 )
(BLAST)

001: MQYQTESWGS YKMSSLGFGG LGMVADTGLL RIESLASESA VVIFSVSTCC MCHAVKGLFR GMGVSPAVHE LDLHPYGGDI QRALIRLLGC SGSSSPGSLP
101: VVFIGGKLVG AMDRVMASHI NGSLVPLLKD AGALWL

Arabidopsis Description

GRXC7ROXY1 [Source:UniProtKB/TrEMBL;Acc:A0A178VBU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.