Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P23860_001 | Banana | plastid | 91.85 | 91.18 |
| GSMUA_Achr3P18710_001 | Banana | cytosol | 86.67 | 87.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 80.74 | 83.85 |
| KRG94592 | Soybean | plastid | 78.52 | 80.3 |
| KRH06898 | Soybean | plastid | 77.04 | 77.61 |
| EES05136 | Sorghum | cytosol | 74.07 | 77.52 |
| Solyc05g015910.1.1 | Tomato | cytosol | 73.33 | 75.57 |
| Os04t0393500-01 | Rice | cytosol | 74.81 | 74.81 |
| PGSC0003DMT400006076 | Potato | plastid | 74.07 | 74.63 |
| Zm00001d016593_P001 | Maize | cytosol | 71.85 | 74.62 |
| Os02t0512400-01 | Rice | cytosol | 73.33 | 73.33 |
| HORVU0Hr1G003840.1 | Barley | extracellular | 72.59 | 73.13 |
| TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 71.11 | 71.64 |
| TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 71.11 | 71.64 |
| TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 71.11 | 71.64 |
| Zm00001d003927_P001 | Maize | cytosol | 72.59 | 71.53 |
| EES10652 | Sorghum | cytosol | 71.85 | 70.8 |
| KRH70543 | Soybean | cytosol | 69.63 | 70.68 |
| Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 62.22 | 70.0 |
| PGSC0003DMT400013435 | Potato | cytosol, plastid | 62.22 | 70.0 |
| Solyc01g009900.2.1 | Tomato | cytosol, plastid | 60.74 | 68.33 |
| GSMUA_Achr5P00380_001 | Banana | extracellular | 51.85 | 67.96 |
| PGSC0003DMT400013427 | Potato | mitochondrion, plastid | 59.26 | 66.67 |
| KRH01571 | Soybean | cytosol | 69.63 | 66.2 |
| GSMUA_Achr8P09970_001 | Banana | cytosol | 49.63 | 65.05 |
| Solyc01g009890.1.1 | Tomato | cytosol, plastid | 61.48 | 63.85 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 48.15 | 63.11 |
| PGSC0003DMT400013430 | Potato | cytosol | 60.74 | 63.08 |
| VIT_01s0146g00220.t01 | Wine grape | cytosol | 71.85 | 62.18 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular | 47.41 | 62.14 |
| CDX91918 | Canola | cytosol | 60.74 | 61.19 |
| GSMUA_Achr1P26720_001 | Banana | cytosol | 46.67 | 61.16 |
| Bra000980.1-P | Field mustard | cytosol | 61.48 | 60.58 |
| CDX74327 | Canola | cytosol | 61.48 | 60.58 |
| AT3G02000.1 | Thale cress | cytosol | 60.74 | 60.29 |
| Bra006236.1-P | Field mustard | cytosol | 60.74 | 60.29 |
| GSMUA_Achr11P... | Banana | cytosol | 45.93 | 60.19 |
| CDX78558 | Canola | cytosol | 60.74 | 59.85 |
| GSMUA_Achr7P03690_001 | Banana | cytosol | 45.19 | 59.22 |
| CDX70540 | Canola | cytosol | 60.0 | 59.12 |
| CDX85614 | Canola | cytosol | 59.26 | 58.39 |
| Bra023448.1-P | Field mustard | cytosol | 59.26 | 58.39 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular | 44.44 | 58.25 |
| GSMUA_Achr8P33660_001 | Banana | cytosol | 44.44 | 58.25 |
| AT5G14070.1 | Thale cress | cytosol | 60.0 | 57.86 |
| Bra008782.1-P | Field mustard | cytosol | 57.04 | 57.46 |
| GSMUA_Achr5P00370_001 | Banana | cytosol | 43.7 | 57.28 |
| CDX91084 | Canola | cytosol | 57.78 | 56.93 |
| GSMUA_Achr4P22980_001 | Banana | endoplasmic reticulum, extracellular | 44.44 | 56.6 |
| GSMUA_Achr7P01150_001 | Banana | endoplasmic reticulum, extracellular | 44.44 | 55.56 |
| CDX69609 | Canola | cytosol | 36.3 | 48.51 |
| CDY58422 | Canola | cytosol | 47.41 | 38.1 |
Protein Annotations
| MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
| GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr10G11860_001 | EnsemblPlants:GSMUA_Achr10P11860_001 |
| EnsemblPlants:GSMUA_Achr10T11860_001 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin | InterPro:Glutaredoxin_subgr | InterPro:IPR002109 | UniProt:M0RHG2 |
| PFAM:PF00462 | PRINTS:PR00160 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF128 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR02189 | TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI0002948A9E | SEG:seg | : |
Description
Glutaredoxin-C3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G11860_001]
Coordinates
chr10:+:21146589..21146996
Molecular Weight (calculated)
13900.1 Da
IEP (calculated)
6.762
GRAVY (calculated)
0.524
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYQAAAAAA EAWGYVAAAA ARGATMDALE RVERLAAESA VVIFSVSTCC MCHAVKRLFC GMGVSPTVVE LDEDPRGKEM ERALSRLLGG GAAGGAAVPV
101: VFIGGKLVGA MDRVMAAHIN GTLVPLLKEA GALWL
101: VFIGGKLVGA MDRVMAAHIN GTLVPLLKEA GALWL
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.