Factsheet for GSMUA_Achr7P01150_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P22980_001	Banana	endoplasmic reticulum, extracellular	86.11	87.74
TraesCS2D01G252500.1	Wheat	cytosol	75.0	59.12
TraesCS2A01G251700.1	Wheat	cytosol	75.0	59.12
TraesCS2B01G271600.1	Wheat	cytosol	75.0	59.12
KRH58685	Soybean	cytosol	55.56	55.05
Solyc08g036570.1.1	Tomato	cytosol	62.96	53.97
PGSC0003DMT400046079	Potato	cytosol	62.96	52.71
GSMUA_Achr8P33660_001	Banana	cytosol	50.0	52.43
GSMUA_Achr8P09970_001	Banana	cytosol	49.07	51.46
GSMUA_Achr5P00380_001	Banana	extracellular	48.15	50.49
GSMUA_Achr5P00370_001	Banana	cytosol	48.15	50.49
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.15	50.49
GSMUA_Achr11P...	Banana	cytosol	48.15	50.49
GSMUA_Achr11P...	Banana	cytosol, extracellular	48.15	50.49
Zm00001d018802_P001	Maize	cytosol	73.15	49.69
GSMUA_Achr1P26720_001	Banana	cytosol	46.3	48.54
EER95872	Sorghum	cytosol	73.15	47.59
GSMUA_AchrUn_...	Banana	cytosol, extracellular	45.37	47.57
GSMUA_Achr7P03690_001	Banana	cytosol	45.37	47.57
KRH12792	Soybean	plastid	56.48	47.29
KRH37754	Soybean	plastid	55.56	45.11
GSMUA_Achr10P...	Banana	cytosol	55.56	44.44
GSMUA_Achr3P18710_001	Banana	cytosol	53.7	43.61
GSMUA_AchrUn_...	Banana	cytosol	50.93	42.31
GSMUA_Achr6P23860_001	Banana	plastid	52.78	41.91
Os07t0151100-01	Rice	cytosol	72.22	40.62
VIT_10s0003g03940.t01	Wine grape	mitochondrion	62.04	37.43
HORVU2Hr1G060300.1	Barley	cytosol	57.41	35.43

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr7G01150_001	EnsemblPlants:GSMUA_Achr7P01150_001
EnsemblPlants:GSMUA_Achr7T01150_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0TDQ5	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF86	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000296789C	SEG:seg	:	:	:	:

Description

Glutaredoxin-C8 [Source:GMGC_GENE;Acc:GSMUA_Achr7G01150_001]

Coordinates

chr7:-:882822..883148

Molecular Weight (calculated)

10893.6 Da

IEP (calculated)

7.977

GRAVY (calculated)

0.778

Length

108 amino acids

Sequence
(BLAST)

001: MASGNAVVVF SVSGCCMCHV VKHLLLGLGV GPTVYELDQL GKGGREIQAV LSHLLSAASP SPSTSISAAA VPAVFIGGQL LGGVEKVMSC HINGSLVPLL
101: KQAGALWL

Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)

001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL

Arabidopsis Description

GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.