Factsheet for GSMUA_Achr4P22980_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P01150_001	Banana	endoplasmic reticulum, extracellular	87.74	86.11
TraesCS2A01G251700.1	Wheat	cytosol	76.42	59.12
TraesCS2B01G271600.1	Wheat	cytosol	76.42	59.12
TraesCS2D01G252500.1	Wheat	cytosol	76.42	59.12
KRH58685	Soybean	cytosol	58.49	56.88
Solyc08g036570.1.1	Tomato	cytosol	63.21	53.17
GSMUA_Achr5P00370_001	Banana	cytosol	50.94	52.43
GSMUA_Achr8P09970_001	Banana	cytosol	50.94	52.43
PGSC0003DMT400046079	Potato	cytosol	63.21	51.94
Zm00001d018802_P001	Maize	cytosol	77.36	51.57
GSMUA_Achr11P...	Banana	cytosol, extracellular	50.0	51.46
GSMUA_Achr5P00380_001	Banana	extracellular	50.0	51.46
GSMUA_Achr11P...	Banana	cytosol	50.0	51.46
GSMUA_Achr11P...	Banana	cytosol, extracellular	50.0	51.46
GSMUA_Achr8P33660_001	Banana	cytosol	50.0	51.46
GSMUA_Achr1P26720_001	Banana	cytosol	47.17	48.54
EER95872	Sorghum	cytosol	75.47	48.19
GSMUA_AchrUn_...	Banana	cytosol, extracellular	46.23	47.57
GSMUA_Achr7P03690_001	Banana	cytosol	45.28	46.6
KRH12792	Soybean	plastid	55.66	45.74
GSMUA_Achr3P18710_001	Banana	cytosol	56.6	45.11
GSMUA_Achr10P...	Banana	cytosol	56.6	44.44
GSMUA_Achr6P23860_001	Banana	plastid	55.66	43.38
KRH37754	Soybean	plastid	53.77	42.86
GSMUA_AchrUn_...	Banana	cytosol	51.89	42.31
Os07t0151100-01	Rice	cytosol	71.7	39.58
VIT_10s0003g03940.t01	Wine grape	mitochondrion	65.09	38.55
HORVU2Hr1G060300.1	Barley	cytosol	59.43	36.0

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr4G22980_001	EnsemblPlants:GSMUA_Achr4P22980_001
EnsemblPlants:GSMUA_Achr4T22980_001	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0SRA9	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF86	SUPFAM:SSF52833	TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf
UniParc:UPI000296396D	SEG:seg	:	:	:	:

Description

Glutaredoxin-C8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G22980_001]

Coordinates

chr4:+:23208061..23208381

Molecular Weight (calculated)

10736.4 Da

IEP (calculated)

8.346

GRAVY (calculated)

0.649

Length

106 amino acids

Sequence
(BLAST)

001: MASGNAVVVF SVSGCCMCHV VKRLLLGLGV GPTVYELDQE KGGREMQAVL AHLLSGSPST SASSASAALP AVFVGGKLLG GVEKVMSCHI NGSLVPLLKQ
101: AGALWL

Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)

001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL

Arabidopsis Description

GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.