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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • vacuole 1
  • cytosol 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400006076 Potato plastid 94.66 92.54
Solyc01g009910.1.1 Tomato mitochondrion, plastid 71.76 78.33
Solyc01g009900.2.1 Tomato cytosol, plastid 70.23 76.67
GSMUA_Achr10P... Banana cytosol 75.57 73.33
Solyc01g009890.1.1 Tomato cytosol, plastid 72.52 73.08
KRG94592 Soybean plastid 71.76 71.21
GSMUA_Achr6P23860_001 Banana plastid 72.52 69.85
KRH06898 Soybean plastid 70.99 69.4
KRH70543 Soybean cytosol 69.47 68.42
GSMUA_Achr3P18710_001 Banana cytosol 68.7 67.67
EES05136 Sorghum cytosol 66.41 67.44
GSMUA_AchrUn_... Banana cytosol 65.65 66.15
Zm00001d016593_P001 Maize cytosol 64.89 65.38
HORVU0Hr1G003840.1 Barley extracellular 66.41 64.93
Os04t0393500-01 Rice cytosol 66.41 64.44
TraesCS2D01G284300.1 Wheat cytosol, extracellular 64.89 63.43
TraesCS2B01G302700.1 Wheat cytosol, extracellular 64.89 63.43
TraesCS2A01G285600.1 Wheat cytosol, extracellular 64.89 63.43
KRH01571 Soybean cytosol 68.7 63.38
Os02t0512400-01 Rice cytosol 64.89 62.96
VIT_01s0146g00220.t01 Wine grape cytosol 74.81 62.82
EES10652 Sorghum cytosol 65.65 62.77
Zm00001d003927_P001 Maize cytosol 65.65 62.77
Solyc01g067440.2.1 Tomato cytosol 48.85 62.75
AT3G02000.1 Thale cress cytosol 61.07 58.82
CDX91918 Canola cytosol 58.78 57.46
Bra000980.1-P Field mustard cytosol 59.54 56.93
CDX74327 Canola cytosol 59.54 56.93
Bra006236.1-P Field mustard cytosol 58.02 55.88
Bra023448.1-P Field mustard cytosol 58.02 55.47
CDX70540 Canola cytosol 58.02 55.47
CDX78558 Canola cytosol 58.02 55.47
CDX85614 Canola cytosol 58.02 55.47
Solyc01g067460.1.1 Tomato cytosol 42.75 54.9
CDX91084 Canola cytosol 56.49 54.01
Bra008782.1-P Field mustard cytosol 54.96 53.73
AT5G14070.1 Thale cress cytosol 56.49 52.86
Solyc09g074590.1.1 Tomato cytosol 39.69 50.98
Solyc08g036570.1.1 Tomato cytosol 48.85 50.79
CDX69609 Canola cytosol 38.93 50.49
Solyc06g008760.1.1 Tomato cytosol 38.93 50.49
Solyc09g074600.1.1 Tomato cytosol 38.93 50.0
Solyc06g008750.1.1 Tomato cytosol 38.17 49.02
Solyc04g011790.1.1 Tomato cytosol, plastid 35.88 46.08
Solyc09g074580.1.1 Tomato cytosol 35.88 46.08
Solyc04g011880.1.1 Tomato cytosol, plastid 35.11 45.1
Solyc04g011830.1.1 Tomato cytosol, plastid 35.11 45.1
Solyc06g054570.1.1 Tomato cytosol 35.11 44.66
Solyc04g053110.1.1 Tomato cytosol 34.35 44.12
Solyc04g011870.1.1 Tomato cytosol, plastid 34.35 44.12
Solyc04g011850.1.1 Tomato cytosol 34.35 44.12
Solyc04g011840.1.1 Tomato cytosol 34.35 44.12
Solyc05g051730.1.1 Tomato cytosol 34.35 43.69
Solyc09g074570.1.1 Tomato cytosol 34.35 42.45
Solyc04g011860.1.1 Tomato cytosol, plastid 32.82 42.16
Solyc04g011810.1.1 Tomato cytosol, plastid 32.82 42.16
Solyc04g011780.1.1 Tomato extracellular 32.82 42.16
Solyc04g011820.1.1 Tomato cytosol 30.53 42.11
Solyc04g011800.1.1 Tomato cytosol, plastid 32.06 41.18
Solyc05g051720.1.1 Tomato cytosol 32.06 40.38
CDY58422 Canola cytosol 49.62 38.69
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:IPR002109UniProt:K4BYV7PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF62
SUPFAM:SSF52833EnsemblPlantsGene:Solyc05g015910.1EnsemblPlants:Solyc05g015910.1.1TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0002766C76
Description
No Description!
Coordinates
chr5:+:12973179..12973574
Molecular Weight (calculated)
14059.2 Da
IEP (calculated)
7.884
GRAVY (calculated)
0.181
Length
131 amino acids
Sequence
(BLAST)
001: MYQAAESSSW GGNYHSIETR CASSSSDPLE RVIRLASGSA VVIFSMSTCC MCHAVKRLFC GMGVHPTVYE LDQDPKGKDM ERALSRLLGN SPAVPVVFIG
101: GKLIGAMDRV MASHINGTLV PLLKEAGALW L
Best Arabidopsis Sequence Match ( AT5G14070.1 )
(BLAST)
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.