Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- vacuole 1
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400006076 | Potato | plastid | 94.66 | 92.54 |
Solyc01g009910.1.1 | Tomato | mitochondrion, plastid | 71.76 | 78.33 |
Solyc01g009900.2.1 | Tomato | cytosol, plastid | 70.23 | 76.67 |
GSMUA_Achr10P... | Banana | cytosol | 75.57 | 73.33 |
Solyc01g009890.1.1 | Tomato | cytosol, plastid | 72.52 | 73.08 |
KRG94592 | Soybean | plastid | 71.76 | 71.21 |
GSMUA_Achr6P23860_001 | Banana | plastid | 72.52 | 69.85 |
KRH06898 | Soybean | plastid | 70.99 | 69.4 |
KRH70543 | Soybean | cytosol | 69.47 | 68.42 |
GSMUA_Achr3P18710_001 | Banana | cytosol | 68.7 | 67.67 |
EES05136 | Sorghum | cytosol | 66.41 | 67.44 |
GSMUA_AchrUn_... | Banana | cytosol | 65.65 | 66.15 |
Zm00001d016593_P001 | Maize | cytosol | 64.89 | 65.38 |
HORVU0Hr1G003840.1 | Barley | extracellular | 66.41 | 64.93 |
Os04t0393500-01 | Rice | cytosol | 66.41 | 64.44 |
TraesCS2D01G284300.1 | Wheat | cytosol, extracellular | 64.89 | 63.43 |
TraesCS2B01G302700.1 | Wheat | cytosol, extracellular | 64.89 | 63.43 |
TraesCS2A01G285600.1 | Wheat | cytosol, extracellular | 64.89 | 63.43 |
KRH01571 | Soybean | cytosol | 68.7 | 63.38 |
Os02t0512400-01 | Rice | cytosol | 64.89 | 62.96 |
VIT_01s0146g00220.t01 | Wine grape | cytosol | 74.81 | 62.82 |
EES10652 | Sorghum | cytosol | 65.65 | 62.77 |
Zm00001d003927_P001 | Maize | cytosol | 65.65 | 62.77 |
Solyc01g067440.2.1 | Tomato | cytosol | 48.85 | 62.75 |
AT3G02000.1 | Thale cress | cytosol | 61.07 | 58.82 |
CDX91918 | Canola | cytosol | 58.78 | 57.46 |
Bra000980.1-P | Field mustard | cytosol | 59.54 | 56.93 |
CDX74327 | Canola | cytosol | 59.54 | 56.93 |
Bra006236.1-P | Field mustard | cytosol | 58.02 | 55.88 |
Bra023448.1-P | Field mustard | cytosol | 58.02 | 55.47 |
CDX70540 | Canola | cytosol | 58.02 | 55.47 |
CDX78558 | Canola | cytosol | 58.02 | 55.47 |
CDX85614 | Canola | cytosol | 58.02 | 55.47 |
Solyc01g067460.1.1 | Tomato | cytosol | 42.75 | 54.9 |
CDX91084 | Canola | cytosol | 56.49 | 54.01 |
Bra008782.1-P | Field mustard | cytosol | 54.96 | 53.73 |
AT5G14070.1 | Thale cress | cytosol | 56.49 | 52.86 |
Solyc09g074590.1.1 | Tomato | cytosol | 39.69 | 50.98 |
Solyc08g036570.1.1 | Tomato | cytosol | 48.85 | 50.79 |
CDX69609 | Canola | cytosol | 38.93 | 50.49 |
Solyc06g008760.1.1 | Tomato | cytosol | 38.93 | 50.49 |
Solyc09g074600.1.1 | Tomato | cytosol | 38.93 | 50.0 |
Solyc06g008750.1.1 | Tomato | cytosol | 38.17 | 49.02 |
Solyc04g011790.1.1 | Tomato | cytosol, plastid | 35.88 | 46.08 |
Solyc09g074580.1.1 | Tomato | cytosol | 35.88 | 46.08 |
Solyc04g011880.1.1 | Tomato | cytosol, plastid | 35.11 | 45.1 |
Solyc04g011830.1.1 | Tomato | cytosol, plastid | 35.11 | 45.1 |
Solyc06g054570.1.1 | Tomato | cytosol | 35.11 | 44.66 |
Solyc04g053110.1.1 | Tomato | cytosol | 34.35 | 44.12 |
Solyc04g011870.1.1 | Tomato | cytosol, plastid | 34.35 | 44.12 |
Solyc04g011850.1.1 | Tomato | cytosol | 34.35 | 44.12 |
Solyc04g011840.1.1 | Tomato | cytosol | 34.35 | 44.12 |
Solyc05g051730.1.1 | Tomato | cytosol | 34.35 | 43.69 |
Solyc09g074570.1.1 | Tomato | cytosol | 34.35 | 42.45 |
Solyc04g011860.1.1 | Tomato | cytosol, plastid | 32.82 | 42.16 |
Solyc04g011810.1.1 | Tomato | cytosol, plastid | 32.82 | 42.16 |
Solyc04g011780.1.1 | Tomato | extracellular | 32.82 | 42.16 |
Solyc04g011820.1.1 | Tomato | cytosol | 30.53 | 42.11 |
Solyc04g011800.1.1 | Tomato | cytosol, plastid | 32.06 | 41.18 |
Solyc05g051720.1.1 | Tomato | cytosol | 32.06 | 40.38 |
CDY58422 | Canola | cytosol | 49.62 | 38.69 |
Protein Annotations
MapMan:18.8.2 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0015035 |
GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GlrX-like_pln_2 | InterPro:Glutaredoxin |
InterPro:IPR002109 | UniProt:K4BYV7 | PFAM:PF00462 | PFscan:PS51354 | PANTHER:PTHR10168 | PANTHER:PTHR10168:SF62 |
SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc05g015910.1 | EnsemblPlants:Solyc05g015910.1.1 | TIGRFAMs:TIGR02189 | InterPro:Thioredoxin-like_sf | UniParc:UPI0002766C76 |
Description
No Description!
Coordinates
chr5:+:12973179..12973574
Molecular Weight (calculated)
14059.2 Da
IEP (calculated)
7.884
GRAVY (calculated)
0.181
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQAAESSSW GGNYHSIETR CASSSSDPLE RVIRLASGSA VVIFSMSTCC MCHAVKRLFC GMGVHPTVYE LDQDPKGKDM ERALSRLLGN SPAVPVVFIG
101: GKLIGAMDRV MASHINGTLV PLLKEAGALW L
101: GKLIGAMDRV MASHINGTLV PLLKEAGALW L
001: MQYKTETRGS LSYNNNSKVM NNMNVFPSET LAKIESMAAE NAVVIFSVST CCMCHAIKRL FRGMGVSPAV HELDLLPYGV EIHRALLRLL GCSSGGATSP
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
101: GALPVVFIGG KMVGAMERVM ASHINGSLVP LLKDAGALWL
Arabidopsis Description
GRXC8Glutaredoxin-C8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LF89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.