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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400077393 Potato cytosol 96.12 96.12
Solyc05g051720.1.1 Tomato cytosol 88.35 87.5
Solyc04g011790.1.1 Tomato cytosol, plastid 76.7 77.45
Solyc04g011870.1.1 Tomato cytosol, plastid 76.7 77.45
Solyc04g011850.1.1 Tomato cytosol 75.73 76.47
Solyc04g011860.1.1 Tomato cytosol, plastid 75.73 76.47
Solyc04g011810.1.1 Tomato cytosol, plastid 74.76 75.49
Solyc04g011830.1.1 Tomato cytosol, plastid 74.76 75.49
Solyc04g011800.1.1 Tomato cytosol, plastid 73.79 74.51
Solyc04g011840.1.1 Tomato cytosol 72.82 73.53
Solyc04g011880.1.1 Tomato cytosol, plastid 72.82 73.53
Solyc04g053110.1.1 Tomato cytosol 72.82 73.53
Solyc04g011780.1.1 Tomato extracellular 70.87 71.57
Solyc04g011820.1.1 Tomato cytosol 65.05 70.53
VIT_07s0104g01420.t01 Wine grape cytosol 59.22 57.55
Solyc09g074590.1.1 Tomato cytosol 56.31 56.86
Solyc09g074600.1.1 Tomato cytosol 55.34 55.88
GSMUA_Achr5P00380_001 Banana extracellular 52.43 52.43
GSMUA_Achr11P... Banana cytosol 51.46 51.46
TraesCS5B01G049000.1 Wheat cytosol 42.72 51.16
HORVU5Hr1G025610.1 Barley cytosol 51.46 50.96
EES00745 Sorghum cytosol 50.49 50.49
TraesCS5D01G054900.1 Wheat cytosol 50.49 50.49
Zm00001d040837_P001 Maize cytosol 50.49 50.49
Solyc01g067460.1.1 Tomato cytosol 49.51 50.0
TraesCS5A01G094600.1 Wheat cytosol 50.49 50.0
TraesCS5B01G100700.1 Wheat cytosol 50.49 50.0
EES00746 Sorghum cytosol 49.51 49.51
GSMUA_Achr11P... Banana cytosol, extracellular 49.51 49.51
Os12t0538600-00 Rice cytosol, extracellular 49.51 49.51
TraesCS5A01G044100.1 Wheat cytosol 49.51 49.51
TraesCS5B01G048300.1 Wheat cytosol 49.51 49.51
TraesCS5B01G048400.1 Wheat cytosol 49.51 49.51
TraesCS5B01G049200.1 Wheat cytosol 49.51 49.51
TraesCS5D01G054200.1 Wheat cytosol 49.51 49.51
TraesCS5D01G106900.1 Wheat cytosol 49.51 49.04
Zm00001d027695_P001 Maize cytosol 49.51 49.04
Solyc06g008750.1.1 Tomato cytosol 48.54 49.02
GSMUA_Achr1P26720_001 Banana cytosol 48.54 48.54
HORVU5Hr1G010960.1 Barley cytosol 48.54 48.54
Solyc06g054570.1.1 Tomato cytosol 48.54 48.54
TraesCS5A01G044700.1 Wheat cytosol 48.54 48.54
TraesCS5A01G044800.1 Wheat cytosol 48.54 48.54
TraesCS5A01G044900.1 Wheat cytosol 48.54 48.54
TraesCS5A01G045000.1 Wheat cytosol 48.54 48.54
TraesCS5B01G048900.1 Wheat cytosol 48.54 48.54
TraesCS5B01G049100.1 Wheat cytosol 48.54 48.54
TraesCS5B01G101100.1 Wheat cytosol, extracellular 48.54 48.54
TraesCS5D01G054000.1 Wheat cytosol 48.54 48.54
TraesCS5D01G054800.1 Wheat cytosol 48.54 48.54
TraesCS5D01G055000.1 Wheat cytosol 48.54 48.54
TraesCS5D01G055100.1 Wheat cytosol 48.54 48.54
Solyc01g067440.2.1 Tomato cytosol 47.57 48.04
Solyc09g074580.1.1 Tomato cytosol 47.57 48.04
HORVU5Hr1G010870.1 Barley cytosol 47.57 47.57
HORVU5Hr1G010950.1 Barley cytosol 47.57 47.57
HORVU5Hr1G025710.1 Barley cytosol, extracellular 47.57 47.57
Os01t0368900-01 Rice cytosol 47.57 47.57
TraesCS5A01G044400.1 Wheat cytosol 47.57 47.57
TraesCS5A01G094900.1 Wheat extracellular 47.57 47.57
TraesCS5A01G095500.1 Wheat cytosol 47.57 47.57
TraesCS5B01G048600.1 Wheat cytosol 47.57 47.57
TraesCS5B01G100900.1 Wheat cytosol 47.57 47.57
TraesCS5B01G101600.1 Wheat cytosol, extracellular 47.57 47.57
TraesCS5D01G107500.1 Wheat cytosol, extracellular 47.57 47.57
TraesCS5D01G108100.1 Wheat cytosol, extracellular 47.57 47.57
Zm00001d040836_P001 Maize cytosol 47.57 47.57
Solyc06g008760.1.1 Tomato cytosol 46.6 47.52
GSMUA_Achr8P09970_001 Banana cytosol 46.6 46.6
GSMUA_Achr8P33660_001 Banana cytosol 46.6 46.6
GSMUA_AchrUn_... Banana cytosol, extracellular 46.6 46.6
HORVU5Hr1G025680.1 Barley cytosol 46.6 46.6
TraesCS5A01G094700.1 Wheat cytosol 46.6 46.6
TraesCS5D01G054400.1 Wheat cytosol 46.6 46.6
TraesCS5D01G107200.1 Wheat cytosol 46.6 46.6
GSMUA_Achr11P... Banana cytosol, extracellular 44.66 44.66
TraesCS5B01G101000.1 Wheat cytosol 44.66 44.66
TraesCS4D01G147300.1 Wheat cytosol 44.66 44.23
Zm00001d023870_P001 Maize cytosol, extracellular 44.66 44.23
Zm00001d023873_P001 Maize cytosol 44.66 44.23
GSMUA_Achr5P00370_001 Banana cytosol 43.69 43.69
TraesCS5A01G094800.1 Wheat cytosol 43.69 43.69
TraesCS5D01G107300.1 Wheat cytosol 43.69 43.69
EES02025 Sorghum cytosol 44.66 42.99
EES16097 Sorghum cytosol 44.66 42.99
OQU79243 Sorghum cytosol 44.66 42.99
EES16092 Sorghum cytosol 43.69 42.86
TraesCS5A01G094500.1 Wheat cytosol 42.72 42.31
TraesCS5B01G100600.1 Wheat cytosol 42.72 42.31
TraesCS5D01G106800.1 Wheat cytosol 42.72 42.31
HORVU5Hr1G033140.1 Barley cytosol 42.72 41.9
TraesCS3A01G463200.1 Wheat cytosol 41.75 41.35
TraesCS3B01G504700.1 Wheat cytosol 41.75 41.35
TraesCS3B01G506400.1 Wheat cytosol 41.75 41.35
TraesCS3B01G506500.1 Wheat cytosol 41.75 41.35
GSMUA_Achr7P03690_001 Banana cytosol 40.78 40.78
HORVU3Hr1G099050.2 Barley cytosol 42.72 40.74
HORVU3Hr1G099090.1 Barley cytosol 40.78 40.38
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 40.78 40.38
TraesCS3A01G462200.1 Wheat cytosol 40.78 40.38
TraesCS3A01G463000.1 Wheat cytosol 40.78 40.38
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 40.78 40.38
TraesCS3D01G456900.1 Wheat cytosol 40.78 40.38
TraesCS3D01G457200.1 Wheat cytosol 40.78 40.38
Zm00001d023869_P001 Maize cytosol 40.78 40.38
HORVU5Hr1G025690.1 Barley cytosol 43.69 40.18
EES16093 Sorghum cytosol 40.78 40.0
Zm00001d042187_P001 Maize cytosol 42.72 39.64
Solyc09g074570.1.1 Tomato cytosol 40.78 39.62
Os05t0149950-00 Rice cytosol, mitochondrion 43.69 39.47
Os11t0656000-00 Rice cytosol, plastid 41.75 39.45
Os12t0538700-01 Rice cytosol 39.81 39.42
TraesCS3A01G462900.1 Wheat cytosol, extracellular 39.81 39.42
TraesCS3B01G506200.1 Wheat cytosol 39.81 39.42
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 39.81 39.42
Os11t0655900-01 Rice extracellular 40.78 38.89
EES17138 Sorghum cytosol 39.81 38.68
HORVU3Hr1G099150.1 Barley cytosol, extracellular 24.27 38.46
TraesCS3B01G505300.1 Wheat cytosol 38.84 38.46
Solyc01g009910.1.1 Tomato mitochondrion, plastid 44.66 38.33
Zm00001d023872_P001 Maize cytosol, mitochondrion 38.84 38.1
Os11t0656400-00 Rice cytosol, plastid 39.81 37.61
Zm00001d048720_P001 Maize cytosol 39.81 36.94
Os11t0656700-00 Rice cytosol, plastid 38.84 36.7
Solyc01g009900.2.1 Tomato cytosol, plastid 42.72 36.67
Zm00001d048719_P001 Maize cytosol 38.84 36.36
EES16096 Sorghum cytosol 36.89 36.19
Solyc01g009890.1.1 Tomato cytosol, plastid 45.63 36.15
TraesCS3A01G462800.1 Wheat extracellular 28.16 35.37
EES08919 Sorghum cytosol 36.89 34.86
Solyc05g015910.1.1 Tomato cytosol 43.69 34.35
EES08918 Sorghum cytosol, plastid 34.95 34.29
TraesCS3B01G506000.1 Wheat mitochondrion 27.18 34.15
Os01t0936000-00 Rice cytosol 40.78 33.6
HORVU5Hr1G025560.1 Barley cytosol 42.72 32.35
Solyc08g036570.1.1 Tomato cytosol 36.89 30.16
HORVU0Hr1G010190.2 Barley cytosol 28.16 27.62
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:IPR002109UniProt:K4C1K4PFAM:PF00462PFscan:PS51354PANTHER:PTHR10168PANTHER:PTHR10168:SF200
SUPFAM:SSF52833EnsemblPlantsGene:Solyc05g051730.1EnsemblPlants:Solyc05g051730.1.1TIGRFAMs:TIGR02189InterPro:Thioredoxin-like_sfUniParc:UPI0002765905
SEG:seg:::::
Description
No Description!
Coordinates
chr5:+:62125435..62125746
Molecular Weight (calculated)
11185.0 Da
IEP (calculated)
8.048
GRAVY (calculated)
0.334
Length
103 amino acids
Sequence
(BLAST)
001: MDMVMKLGSE SPVVILSKST CCISHSIETL IRGFGANPMV YELDKLSNGK EMEKALIELL GCKSSVPAVF IGEEFVGGSN EIISLNVRGK LKKLLLKANA
101: IWI
Best Arabidopsis Sequence Match ( AT3G62930.1 )
(BLAST)
001: MESVRSLVED KPVVIFSKSS CCMSHSIQTL ISGFGAKMTV YELDQFSNGQ EIEKALVQMG CKPSVPAVFI GQQFIGGANQ VMTLQVKNQL AAMLRRAGAI
101: WV
Arabidopsis Description
GRXS6Monothiol glutaredoxin-S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYC8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.