Factsheet for TraesCS5B01G048900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G284200.2
TraesCS2A01G504600.1
TraesCS2B01G301100.1
TraesCS2D01G283100.2
TraesCS2D01G505300.1
TraesCS3A01G435100.1
TraesCS3A01G536400.1
TraesCS3B01G470100.1
TraesCS3B01G607500.1
TraesCS3D01G541800.1
TraesCS4B01G319100.1
TraesCS4D01G315600.1
TraesCS5A01G493100.1
TraesCS6A01G274500.1
TraesCS6A01G324500.1
TraesCS6A01G412800.1
TraesCS6B01G302000.1
TraesCS6B01G354900.3
TraesCS6B01G462100.1
TraesCS6D01G254800.1
TraesCS6D01G304300.1
TraesCS6D01G397000.1
TraesCS7A01G167900.1
TraesCS7B01G072700.1
TraesCS7D01G168700.1
TraesCSU01G150000.1
TraesCSU01G244000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT4G15700.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS6A01G324500.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS6B01G354900.3	AT1G73360.1	21798944
AT4G15700.1	TraesCS6D01G304300.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7A01G167900.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7B01G072700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7D01G168700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G150000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G244000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS6A01G412800.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6B01G462100.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6D01G397000.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G054800.1	Wheat	cytosol	100.0	100.0
HORVU5Hr1G010960.1	Barley	cytosol	99.03	99.03
TraesCS5A01G044700.1	Wheat	cytosol	99.03	99.03
TraesCS5B01G049100.1	Wheat	cytosol	91.26	91.26
TraesCS5B01G048400.1	Wheat	cytosol	90.29	90.29
TraesCS5B01G049200.1	Wheat	cytosol	90.29	90.29
TraesCS5B01G049000.1	Wheat	cytosol	74.76	89.53
TraesCS5B01G048300.1	Wheat	cytosol	89.32	89.32
TraesCS5B01G048600.1	Wheat	cytosol	89.32	89.32
Zm00001d040837_P001	Maize	cytosol	88.35	88.35
EES00746	Sorghum	cytosol	85.44	85.44
Os01t0368900-01	Rice	cytosol	85.44	85.44
Zm00001d027695_P001	Maize	cytosol	83.5	82.69
EES00745	Sorghum	cytosol	79.61	79.61
Zm00001d040836_P001	Maize	cytosol	79.61	79.61
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	68.93	68.93
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	68.93	68.93
TraesCS5B01G100900.1	Wheat	cytosol	66.99	66.99
TraesCS3B01G506200.1	Wheat	cytosol	66.02	65.38
TraesCS5B01G100700.1	Wheat	cytosol	66.02	65.38
TraesCS5B01G101000.1	Wheat	cytosol	64.08	64.08
Bra006467.1-P	Field mustard	cytosol	62.14	62.75
Bra023688.1-P	Field mustard	cytosol	62.14	62.75
CDX70828	Canola	cytosol	62.14	62.75
CDX88929	Canola	cytosol	62.14	62.75
TraesCS3B01G504700.1	Wheat	cytosol	63.11	62.5
Bra002171.1-P	Field mustard	cytosol	61.16	61.76
CDX92597	Canola	cytosol	61.16	61.76
CDY02610	Canola	cytosol	61.16	61.76
CDY68328	Canola	cytosol	61.16	61.76
KRH11237	Soybean	cytosol	61.16	61.76
KRH11238	Soybean	cytosol	61.16	61.76
KRH21035	Soybean	cytosol	61.16	61.76
VIT_05s0020g01760.t01	Wine grape	cytosol	61.16	61.76
TraesCS3B01G506400.1	Wheat	cytosol	62.14	61.54
TraesCS5B01G100600.1	Wheat	cytosol	62.14	61.54
VIT_05s0020g01750.t01	Wine grape	cytosol	61.16	61.16
CDY13904	Canola	cytosol	60.19	60.78
TraesCS3B01G505300.1	Wheat	cytosol	61.16	60.58
AT5G18600.1	Thale cress	cytosol	59.22	59.8
KRH02215	Soybean	cytosol	59.22	59.8
KRH21036	Soybean	cytosol	59.22	59.8
KRH50911	Soybean	cytosol	59.22	59.8
TraesCS3B01G506500.1	Wheat	cytosol	60.19	59.62
Solyc01g067440.2.1	Tomato	cytosol	58.25	58.82
Os05t0149950-00	Rice	cytosol, mitochondrion	65.05	58.77
AT4G15700.1	Thale cress	cytosol	57.28	57.84
KRH50912	Soybean	cytosol	57.28	57.84
PGSC0003DMT400058325	Potato	cytosol	57.28	57.84
VIT_07s0104g01390.t01	Wine grape	plasma membrane	57.28	57.84
KRH71536	Soybean	extracellular	56.31	57.43
AT3G21460.1	Thale cress	mitochondrion	56.31	56.86
PGSC0003DMT400058374	Potato	cytosol	56.31	56.86
Solyc01g067460.1.1	Tomato	cytosol	56.31	56.86
KRH31919	Soybean	cytosol, plasma membrane	55.34	56.44
Bra033504.1-P	Field mustard	cytosol	52.43	56.25
AT4G15660.1	Thale cress	cytosol, extracellular	55.34	55.88
Bra001831.1-P	Field mustard	cytosol	55.34	55.88
Bra012773.1-P	Field mustard	cytosol	55.34	55.88
Bra033503.1-P	Field mustard	cytosol	55.34	55.88
CDX90576	Canola	cytosol	55.34	55.88
CDY09747	Canola	cytosol	55.34	55.88
CDY32431	Canola	cytosol	55.34	55.88
CDY48891	Canola	cytosol	55.34	55.88
CDY66332	Canola	cytosol	55.34	55.88
CDY66333	Canola	cytosol	55.34	55.88
Bra031540.1-P	Field mustard	cytosol	53.4	55.56
CDY06230	Canola	cytosol	53.4	55.56
CDY09953	Canola	cytosol	53.4	55.56
Bra038076.1-P	Field mustard	cytosol, extracellular	54.37	55.45
CDY09078	Canola	cytosol, extracellular	54.37	55.45
CDY22745	Canola	cytosol, extracellular	54.37	55.45
KRG96386	Soybean	cytosol	54.37	55.45
KRH68125	Soybean	cytosol	54.37	55.45
AT4G15670.1	Thale cress	cytosol	54.37	54.9
AT4G15680.1	Thale cress	cytosol	54.37	54.9
AT4G15690.1	Thale cress	cytosol	54.37	54.9
Bra033501.1-P	Field mustard	cytosol	54.37	54.9
CDY32430	Canola	cytosol, plastid	54.37	54.9
KRG96387	Soybean	cytosol	54.37	54.9
KRH68127	Soybean	cytosol	54.37	54.9
PGSC0003DMT400042706	Potato	cytosol	54.37	54.37
Bra001830.1-P	Field mustard	cytosol, plastid	53.4	53.92
Bra023883.1-P	Field mustard	cytosol, plastid	53.4	53.92
CDY19270	Canola	cytosol, plastid	53.4	53.92
CDY22746	Canola	cytosol	53.4	53.92
CDY37292	Canola	cytosol, plastid	53.4	53.92
CDY48890	Canola	cytosol, plastid	53.4	53.92
CDY54294	Canola	cytosol	53.4	53.92
CDY54296	Canola	cytosol	53.4	53.92
PGSC0003DMT400029596	Potato	cytosol	53.4	53.92
PGSC0003DMT400041380	Potato	cytosol, plastid	53.4	53.92
Solyc06g008750.1.1	Tomato	cytosol	53.4	53.92
TraesCS3B01G506000.1	Wheat	mitochondrion	42.72	53.66
AT1G06830.1	Thale cress	cytosol	51.46	53.54
CDY10229	Canola	cytosol	51.46	53.54
CDY54881	Canola	cytosol	51.46	53.54
AT2G47870.1	Thale cress	cytosol	53.4	53.4
Bra007717.1-P	Field mustard	cytosol	39.81	53.25
AT2G30540.1	Thale cress	cytosol	52.43	52.94
Bra038075.1-P	Field mustard	cytosol	52.43	52.94
PGSC0003DMT400013649	Potato	cytosol	52.43	52.94
PGSC0003DMT400027946	Potato	cytosol, plastid	52.43	52.94
PGSC0003DMT400041381	Potato	cytosol, plastid	52.43	52.94
PGSC0003DMT400041382	Potato	cytosol	52.43	52.94
Solyc04g011790.1.1	Tomato	cytosol, plastid	52.43	52.94
Solyc09g074580.1.1	Tomato	cytosol	52.43	52.94
VIT_07s0104g01400.t01	Wine grape	cytosol	52.43	52.94
PGSC0003DMT400041379	Potato	cytosol, plastid	48.54	52.63
PGSC0003DMT400027953	Potato	cytosol, plastid	51.46	52.48
Bra004426.1-P	Field mustard	cytosol	52.43	52.43
CDX80138	Canola	cytosol	52.43	52.43
Bra033499.1-P	Field mustard	cytosol	49.51	52.04
AT2G47880.1	Thale cress	cytosol	51.46	51.96
Bra018307.1-P	Field mustard	cytosol	51.46	51.96
Bra021641.1-P	Field mustard	cytosol	51.46	51.96
CDY09079	Canola	cytosol	51.46	51.96
CDY10745	Canola	cytosol	51.46	51.96
CDY23990	Canola	cytosol	51.46	51.96
CDY29666	Canola	cytosol	51.46	51.96
CDY52638	Canola	cytosol	51.46	51.96
KRH31918	Soybean	cytosol	51.46	51.96
KRH71537	Soybean	cytosol	51.46	51.96
PGSC0003DMT400027948	Potato	cytosol, plastid	51.46	51.96
PGSC0003DMT400027950	Potato	cytosol, plastid	51.46	51.96
PGSC0003DMT400027951	Potato	cytosol, plastid	51.46	51.96
PGSC0003DMT400029525	Potato	cytosol	51.46	51.96
PGSC0003DMT400041378	Potato	cytosol, plastid	51.46	51.96
Solyc04g011810.1.1	Tomato	cytosol, plastid	51.46	51.96
Solyc04g011830.1.1	Tomato	cytosol, plastid	51.46	51.96
Solyc04g011850.1.1	Tomato	cytosol	51.46	51.96
Solyc04g011870.1.1	Tomato	cytosol, plastid	51.46	51.96
Solyc09g074590.1.1	Tomato	cytosol	51.46	51.96
CDY69190	Canola	cytosol	52.43	51.92
Solyc04g011820.1.1	Tomato	cytosol	47.57	51.58
PGSC0003DMT400079099	Potato	cytosol	48.54	51.55
Solyc06g008760.1.1	Tomato	cytosol	50.49	51.49
CDY53023	Canola	cytosol	51.46	51.46
Solyc06g054570.1.1	Tomato	cytosol	51.46	51.46
AT3G62960.1	Thale cress	cytosol	50.49	50.98
Bra004424.1-P	Field mustard	cytosol	50.49	50.98
CDX76678	Canola	cytosol	50.49	50.98
CDX80139	Canola	cytosol	50.49	50.98
CDX84825	Canola	cytosol	50.49	50.98
CDX97824	Canola	cytosol	50.49	50.98
CDY53024	Canola	cytosol	50.49	50.98
PGSC0003DMT400027947	Potato	cytosol, plastid	50.49	50.98
PGSC0003DMT400027949	Potato	cytosol, plastid	50.49	50.98
PGSC0003DMT400027954	Potato	cytosol, plastid	50.49	50.98
PGSC0003DMT400029597	Potato	cytosol	50.49	50.98
Solyc04g011800.1.1	Tomato	cytosol, plastid	50.49	50.98
Solyc04g011840.1.1	Tomato	cytosol	50.49	50.98
Solyc04g011860.1.1	Tomato	cytosol, plastid	50.49	50.98
Solyc04g053110.1.1	Tomato	cytosol	50.49	50.98
Solyc09g074600.1.1	Tomato	cytosol	50.49	50.98
PGSC0003DMT400027952	Potato	cytosol	46.6	50.53
AT3G62950.1	Thale cress	cytosol	50.49	50.49
Bra014380.1-P	Field mustard	cytosol	50.49	50.49
CDX89161	Canola	cytosol	50.49	50.49
CDY27469	Canola	cytosol	51.46	50.48
Bra003517.1-P	Field mustard	cytosol, extracellular	49.51	50.0
Bra007718.1-P	Field mustard	cytosol	49.51	50.0
Bra014379.1-P	Field mustard	cytosol	49.51	50.0
Bra032563.1-P	Field mustard	cytosol	49.51	50.0
CDX89162	Canola	cytosol	49.51	50.0
CDX95739	Canola	cytosol	49.51	50.0
CDY11466	Canola	cytosol	49.51	50.0
CDY32493	Canola	cytosol	49.51	50.0
CDY68061	Canola	cytosol	49.51	50.0
PGSC0003DMT400042707	Potato	cytosol	49.51	50.0
Solyc04g011880.1.1	Tomato	cytosol, plastid	49.51	50.0
CDX76677	Canola	cytosol	49.51	49.51
CDY11464	Canola	cytosol	49.51	49.51
CDY11465	Canola	cytosol	49.51	49.51
CDY18141	Canola	cytosol	48.54	49.02
KRH31917	Soybean	cytosol	48.54	49.02
KRH68129	Soybean	cytosol	48.54	49.02
Solyc04g011780.1.1	Tomato	extracellular	48.54	49.02
CDY55528	Canola	cytosol	49.51	48.57
PGSC0003DMT400077393	Potato	cytosol	48.54	48.54
Solyc05g051730.1.1	Tomato	cytosol	48.54	48.54
AT1G03020.1	Thale cress	cytosol	47.57	48.04
Bra014382.1-P	Field mustard	cytosol	47.57	48.04
Bra033366.1-P	Field mustard	cytosol	47.57	48.04
CDX89159	Canola	cytosol	47.57	48.04
CDX89921	Canola	cytosol	47.57	48.04
CDX93949	Canola	cytosol	47.57	48.04
KRG96389	Soybean	cytosol	47.57	48.04
KRH71538	Soybean	cytosol	47.57	48.04
Bra021444.1-P	Field mustard	cytosol	48.54	47.62
Solyc09g074570.1.1	Tomato	cytosol	48.54	47.17
PGSC0003DMT400077394	Potato	cytosol	47.57	47.12
Solyc05g051720.1.1	Tomato	cytosol	47.57	47.12
Bra007714.1-P	Field mustard	cytosol	46.6	47.06
CDX76675	Canola	cytosol	46.6	47.06
CDY11462	Canola	cytosol	46.6	47.06
PGSC0003DMT400029673	Potato	cytosol	47.57	46.23
AT3G62930.1	Thale cress	cytosol	45.63	46.08
CDY25124	Canola	cytosol	45.63	46.08
VIT_07s0104g01420.t01	Wine grape	cytosol	46.6	45.28
Bra003515.1-P	Field mustard	cytosol	44.66	45.1
CDX67910	Canola	cytosol	44.66	45.1
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	58.25	44.78
KRG96390	Soybean	cytosol, plastid	44.66	43.81
KRH68130	Soybean	cytosol, plastid	44.66	43.81
KRH31916	Soybean	cytosol	38.84	42.11
KRH31915	Soybean	cytosol, plastid	39.81	39.05
TraesCS2B01G271600.1	Wheat	cytosol	51.46	38.69
Bra015532.1-P	Field mustard	cytosol	45.63	32.41
CDY71728	Canola	cytosol	41.75	30.28
CDX97821	Canola	mitochondrion	36.89	28.57
PGSC0003DMT400013650	Potato	cytosol	39.81	13.9

Protein Annotations

EnsemblPlants:TraesCS5B01G048900.1	EnsemblPlantsGene:TraesCS5B01G048900	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GlrX-like_pln_2
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Thioredoxin-like_sf	PANTHER:PTHR10168	PANTHER:PTHR10168:SF92	PFAM:PF00462
PFscan:PS51354	SUPFAM:SSF52833	TIGR:cd03419	TIGRFAMs:TIGR02189	MapMan:18.8.2	:

Description

No Description!

Coordinates

chr5B:+:54831147..54831458

Molecular Weight (calculated)

11089.8 Da

IEP (calculated)

8.965

GRAVY (calculated)

0.196

Length

103 amino acids

Sequence
(BLAST)

001: MEQVTKLAGQ RAVVIFSMSS CCMCHTVARL FRDLGANPAE VDLDEDPRGK EMEKALARLL GRNPAVPAVF IGGRLVGSTD KVMSLHLSGK LVPLLRNAGA
101: VWV

Best Arabidopsis Sequence Match ( AT2G47870.1 )
(BLAST)

001: MERVRDLASE KAAVIFTKSS CCMCHSIKTL FYELGASPAI HELDKDPQGP DMERALFRVF GSNPAVPAVF VGGRYVGSAK DVISFHVDGS LKQMLKASNA
101: IWL

Arabidopsis Description

GRXC12Putative glutaredoxin-C12 [Source:UniProtKB/Swiss-Prot;Acc:O82254]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.