Factsheet for TraesCS5B01G100900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G284200.2
TraesCS2A01G504600.1
TraesCS2B01G301100.1
TraesCS2D01G283100.2
TraesCS2D01G505300.1
TraesCS3A01G435100.1
TraesCS3A01G536400.1
TraesCS3B01G470100.1
TraesCS3B01G607500.1
TraesCS3D01G541800.1
TraesCS4B01G319100.1
TraesCS4D01G315600.1
TraesCS5A01G493100.1
TraesCS6A01G274500.1
TraesCS6A01G324500.1
TraesCS6A01G412800.1
TraesCS6B01G302000.1
TraesCS6B01G354900.3
TraesCS6B01G462100.1
TraesCS6D01G254800.1
TraesCS6D01G304300.1
TraesCS6D01G397000.1
TraesCS7A01G167900.1
TraesCS7B01G072700.1
TraesCS7D01G168700.1
TraesCSU01G150000.1
TraesCSU01G244000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30540.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G30540.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT4G15700.1	TraesCS2A01G504600.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS2D01G505300.1	AT1G22920.1	21798944
AT4G15700.1	TraesCS6A01G324500.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS6B01G354900.3	AT1G73360.1	21798944
AT4G15700.1	TraesCS6D01G304300.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7A01G167900.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7B01G072700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS7D01G168700.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G150000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCSU01G244000.1	AT1G73360.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05230.1	21798944
AT4G15700.1	TraesCS2A01G284200.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS2B01G301100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS2D01G283100.2	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G435100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3A01G536400.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G470100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3B01G607500.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS3D01G541800.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4B01G319100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS4D01G315600.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS5A01G493100.1	AT2G05250.1	21798944
AT4G15700.1	TraesCS6A01G412800.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6B01G462100.1	AT5G08330.1	21798944
AT4G15700.1	TraesCS6D01G397000.1	AT5G08330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G094700.1	Wheat	cytosol	99.03	99.03
TraesCS5D01G107200.1	Wheat	cytosol	99.03	99.03
HORVU5Hr1G025680.1	Barley	cytosol	97.09	97.09
Os12t0538600-00	Rice	cytosol, extracellular	87.38	87.38
TraesCS5B01G101100.1	Wheat	cytosol, extracellular	85.44	85.44
TraesCS5B01G101600.1	Wheat	cytosol, extracellular	85.44	85.44
TraesCS5B01G100700.1	Wheat	cytosol	82.52	81.73
GSMUA_Achr11P...	Banana	cytosol	70.87	70.87
GSMUA_Achr11P...	Banana	cytosol, extracellular	70.87	70.87
GSMUA_Achr5P00380_001	Banana	extracellular	69.9	69.9
TraesCS5B01G048300.1	Wheat	cytosol	69.9	69.9
GSMUA_Achr1P26720_001	Banana	cytosol	68.93	68.93
TraesCS5B01G048400.1	Wheat	cytosol	68.93	68.93
TraesCS5B01G049000.1	Wheat	cytosol	57.28	68.6
GSMUA_Achr8P33660_001	Banana	cytosol	66.99	66.99
TraesCS5B01G048900.1	Wheat	cytosol	66.99	66.99
TraesCS5B01G049100.1	Wheat	cytosol	66.99	66.99
TraesCS5B01G049200.1	Wheat	cytosol	66.99	66.99
KRH11237	Soybean	cytosol	65.05	65.69
TraesCS5B01G048600.1	Wheat	cytosol	65.05	65.05
KRG96386	Soybean	cytosol	63.11	64.36
GSMUA_Achr5P00370_001	Banana	cytosol	64.08	64.08
KRH21036	Soybean	cytosol	63.11	63.73
GSMUA_AchrUn_...	Banana	cytosol, extracellular	63.11	63.11
TraesCS3B01G504700.1	Wheat	cytosol	63.11	62.5
KRH68125	Soybean	cytosol	61.16	62.38
GSMUA_Achr7P03690_001	Banana	cytosol	62.14	62.14
AT4G15700.1	Thale cress	cytosol	61.16	61.76
Bra033503.1-P	Field mustard	cytosol	61.16	61.76
CDY66333	Canola	cytosol	61.16	61.76
Solyc01g067460.1.1	Tomato	cytosol	61.16	61.76
TraesCS3B01G506400.1	Wheat	cytosol	62.14	61.54
TraesCS3B01G506500.1	Wheat	cytosol	62.14	61.54
TraesCS5B01G101000.1	Wheat	cytosol	61.16	61.16
AT4G15680.1	Thale cress	cytosol	60.19	60.78
KRH02215	Soybean	cytosol	60.19	60.78
KRH50911	Soybean	cytosol	60.19	60.78
PGSC0003DMT400058374	Potato	cytosol	60.19	60.78
TraesCS3B01G505300.1	Wheat	cytosol	61.16	60.58
TraesCS5B01G100600.1	Wheat	cytosol	61.16	60.58
AT4G15660.1	Thale cress	cytosol, extracellular	59.22	59.8
AT4G15690.1	Thale cress	cytosol	59.22	59.8
Bra004424.1-P	Field mustard	cytosol	59.22	59.8
Bra023688.1-P	Field mustard	cytosol	59.22	59.8
Bra033501.1-P	Field mustard	cytosol	59.22	59.8
CDX80139	Canola	cytosol	59.22	59.8
CDY02610	Canola	cytosol	59.22	59.8
CDY53024	Canola	cytosol	59.22	59.8
VIT_05s0020g01760.t01	Wine grape	cytosol	59.22	59.8
VIT_07s0104g01390.t01	Wine grape	plasma membrane	59.22	59.8
TraesCS3B01G506200.1	Wheat	cytosol	60.19	59.62
AT1G06830.1	Thale cress	cytosol	57.28	59.6
KRH71536	Soybean	extracellular	58.25	59.41
VIT_05s0020g01750.t01	Wine grape	cytosol	59.22	59.22
AT2G47880.1	Thale cress	cytosol	58.25	58.82
AT4G15670.1	Thale cress	cytosol	58.25	58.82
Bra006467.1-P	Field mustard	cytosol	58.25	58.82
Bra007718.1-P	Field mustard	cytosol	58.25	58.82
CDX70828	Canola	cytosol	58.25	58.82
CDX76678	Canola	cytosol	58.25	58.82
CDX88929	Canola	cytosol	58.25	58.82
CDY11466	Canola	cytosol	58.25	58.82
CDY68328	Canola	cytosol	58.25	58.82
CDY10229	Canola	cytosol	56.31	58.59
KRH31919	Soybean	cytosol, plasma membrane	57.28	58.42
Bra033504.1-P	Field mustard	cytosol	54.37	58.33
CDY27469	Canola	cytosol	59.22	58.1
AT5G18600.1	Thale cress	cytosol	57.28	57.84
Bra002171.1-P	Field mustard	cytosol	57.28	57.84
Bra012773.1-P	Field mustard	cytosol	57.28	57.84
CDX90576	Canola	cytosol	57.28	57.84
CDX92597	Canola	cytosol	57.28	57.84
CDY09747	Canola	cytosol	57.28	57.84
CDY13904	Canola	cytosol	57.28	57.84
CDY22746	Canola	cytosol	57.28	57.84
CDY54294	Canola	cytosol	57.28	57.84
KRH11238	Soybean	cytosol	57.28	57.84
KRH50912	Soybean	cytosol	57.28	57.84
Bra031540.1-P	Field mustard	cytosol	55.34	57.58
CDY06230	Canola	cytosol	55.34	57.58
CDY09953	Canola	cytosol	55.34	57.58
Bra038076.1-P	Field mustard	cytosol, extracellular	56.31	57.43
CDY09078	Canola	cytosol, extracellular	56.31	57.43
CDY22745	Canola	cytosol, extracellular	56.31	57.43
AT2G30540.1	Thale cress	cytosol	56.31	56.86
AT3G62960.1	Thale cress	cytosol	56.31	56.86
Bra003517.1-P	Field mustard	cytosol, extracellular	56.31	56.86
Bra014379.1-P	Field mustard	cytosol	56.31	56.86
Bra038075.1-P	Field mustard	cytosol	56.31	56.86
CDX89162	Canola	cytosol	56.31	56.86
CDX95739	Canola	cytosol	56.31	56.86
CDY66332	Canola	cytosol	56.31	56.86
CDY68061	Canola	cytosol	56.31	56.86
KRH21035	Soybean	cytosol	56.31	56.86
PGSC0003DMT400058325	Potato	cytosol	56.31	56.86
Solyc01g067440.2.1	Tomato	cytosol	56.31	56.86
CDY54881	Canola	cytosol	54.37	56.57
Solyc06g008760.1.1	Tomato	cytosol	55.34	56.44
CDY55528	Canola	cytosol	57.28	56.19
Bra033499.1-P	Field mustard	cytosol	53.4	56.12
TraesCS3B01G506000.1	Wheat	mitochondrion	44.66	56.1
Bra021641.1-P	Field mustard	cytosol	55.34	55.88
CDY09079	Canola	cytosol	55.34	55.88
CDY23990	Canola	cytosol	55.34	55.88
CDY29666	Canola	cytosol	55.34	55.88
CDY52638	Canola	cytosol	55.34	55.88
CDY54296	Canola	cytosol	55.34	55.88
Bra021444.1-P	Field mustard	cytosol	56.31	55.24
Bra018307.1-P	Field mustard	cytosol	54.37	54.9
CDX84825	Canola	cytosol	54.37	54.9
CDY10745	Canola	cytosol	54.37	54.9
PGSC0003DMT400029597	Potato	cytosol	54.37	54.9
Solyc06g008750.1.1	Tomato	cytosol	54.37	54.9
CDY69190	Canola	cytosol	55.34	54.81
CDX97824	Canola	cytosol	53.4	53.92
KRG96387	Soybean	cytosol	53.4	53.92
KRH31918	Soybean	cytosol	53.4	53.92
KRH68127	Soybean	cytosol	53.4	53.92
KRH71537	Soybean	cytosol	53.4	53.92
PGSC0003DMT400013649	Potato	cytosol	53.4	53.92
PGSC0003DMT400029525	Potato	cytosol	53.4	53.92
Solyc06g054570.1.1	Tomato	cytosol	53.4	53.4
AT3G21460.1	Thale cress	mitochondrion	52.43	52.94
Solyc09g074590.1.1	Tomato	cytosol	52.43	52.94
Solyc09g074600.1.1	Tomato	cytosol	52.43	52.94
PGSC0003DMT400079099	Potato	cytosol	49.51	52.58
Bra001831.1-P	Field mustard	cytosol	51.46	51.96
CDY32431	Canola	cytosol	51.46	51.96
CDY48891	Canola	cytosol	51.46	51.96
PGSC0003DMT400029596	Potato	cytosol	51.46	51.96
PGSC0003DMT400041379	Potato	cytosol, plastid	47.57	51.58
Bra023883.1-P	Field mustard	cytosol, plastid	50.49	50.98
CDY19270	Canola	cytosol, plastid	50.49	50.98
CDY37292	Canola	cytosol, plastid	50.49	50.98
PGSC0003DMT400041381	Potato	cytosol, plastid	50.49	50.98
Solyc04g011790.1.1	Tomato	cytosol, plastid	50.49	50.98
Solyc09g074580.1.1	Tomato	cytosol	50.49	50.98
PGSC0003DMT400027952	Potato	cytosol	46.6	50.53
CDY32430	Canola	cytosol, plastid	49.51	50.0
PGSC0003DMT400041380	Potato	cytosol, plastid	49.51	50.0
Solyc04g011800.1.1	Tomato	cytosol, plastid	49.51	50.0
Solyc04g011850.1.1	Tomato	cytosol	49.51	50.0
Solyc04g011860.1.1	Tomato	cytosol, plastid	49.51	50.0
Solyc04g011870.1.1	Tomato	cytosol, plastid	49.51	50.0
Solyc09g074570.1.1	Tomato	cytosol	51.46	50.0
VIT_07s0104g01400.t01	Wine grape	cytosol	49.51	50.0
AT2G47870.1	Thale cress	cytosol	49.51	49.51
Bra004426.1-P	Field mustard	cytosol	49.51	49.51
CDX80138	Canola	cytosol	49.51	49.51
PGSC0003DMT400042706	Potato	cytosol	49.51	49.51
Solyc04g011820.1.1	Tomato	cytosol	45.63	49.47
PGSC0003DMT400029673	Potato	cytosol	50.49	49.06
Bra001830.1-P	Field mustard	cytosol, plastid	48.54	49.02
CDY48890	Canola	cytosol, plastid	48.54	49.02
KRH31917	Soybean	cytosol	48.54	49.02
KRH68129	Soybean	cytosol	48.54	49.02
PGSC0003DMT400027946	Potato	cytosol, plastid	48.54	49.02
PGSC0003DMT400027947	Potato	cytosol, plastid	48.54	49.02
PGSC0003DMT400027948	Potato	cytosol, plastid	48.54	49.02
PGSC0003DMT400027950	Potato	cytosol, plastid	48.54	49.02
PGSC0003DMT400027951	Potato	cytosol, plastid	48.54	49.02
PGSC0003DMT400041382	Potato	cytosol	48.54	49.02
Solyc04g011810.1.1	Tomato	cytosol, plastid	48.54	49.02
Solyc04g011830.1.1	Tomato	cytosol, plastid	48.54	49.02
CDY53023	Canola	cytosol	48.54	48.54
VIT_07s0104g01420.t01	Wine grape	cytosol	49.51	48.11
Bra007717.1-P	Field mustard	cytosol	35.92	48.05
KRG96389	Soybean	cytosol	47.57	48.04
KRH71538	Soybean	cytosol	47.57	48.04
PGSC0003DMT400027949	Potato	cytosol, plastid	47.57	48.04
Solyc05g051730.1.1	Tomato	cytosol	47.57	47.57
PGSC0003DMT400027953	Potato	cytosol, plastid	46.6	47.52
PGSC0003DMT400077394	Potato	cytosol	47.57	47.12
Solyc05g051720.1.1	Tomato	cytosol	47.57	47.12
PGSC0003DMT400027954	Potato	cytosol, plastid	46.6	47.06
Solyc04g011780.1.1	Tomato	extracellular	46.6	47.06
Solyc04g011840.1.1	Tomato	cytosol	46.6	47.06
AT3G62950.1	Thale cress	cytosol	46.6	46.6
Bra014380.1-P	Field mustard	cytosol	46.6	46.6
CDX89161	Canola	cytosol	46.6	46.6
PGSC0003DMT400077393	Potato	cytosol	46.6	46.6
Bra032563.1-P	Field mustard	cytosol	45.63	46.08
CDY32493	Canola	cytosol	45.63	46.08
CDX76677	Canola	cytosol	45.63	45.63
CDY11464	Canola	cytosol	45.63	45.63
CDY11465	Canola	cytosol	45.63	45.63
TraesCS2B01G302700.1	Wheat	cytosol, extracellular	59.22	45.52
AT1G03020.1	Thale cress	cytosol	44.66	45.1
Bra014382.1-P	Field mustard	cytosol	44.66	45.1
CDX89159	Canola	cytosol	44.66	45.1
CDX93949	Canola	cytosol	44.66	45.1
CDY18141	Canola	cytosol	44.66	45.1
PGSC0003DMT400041378	Potato	cytosol, plastid	44.66	45.1
Solyc04g011880.1.1	Tomato	cytosol, plastid	44.66	45.1
AT3G62930.1	Thale cress	cytosol	43.69	44.12
Bra033366.1-P	Field mustard	cytosol	43.69	44.12
CDX89921	Canola	cytosol	43.69	44.12
Solyc04g053110.1.1	Tomato	cytosol	43.69	44.12
Bra003515.1-P	Field mustard	cytosol	42.72	43.14
Bra007714.1-P	Field mustard	cytosol	42.72	43.14
CDX67910	Canola	cytosol	42.72	43.14
CDX76675	Canola	cytosol	42.72	43.14
CDY11462	Canola	cytosol	42.72	43.14
PGSC0003DMT400042707	Potato	cytosol	42.72	43.14
CDY25124	Canola	cytosol	41.75	42.16
KRH31916	Soybean	cytosol	38.84	42.11
TraesCS2B01G271600.1	Wheat	cytosol	53.4	40.15
KRH68130	Soybean	cytosol, plastid	38.84	38.1
KRG96390	Soybean	cytosol, plastid	37.86	37.14
Bra015532.1-P	Field mustard	cytosol	51.46	36.55
KRH31915	Soybean	cytosol, plastid	35.92	35.24
CDY71728	Canola	cytosol	47.57	34.51
CDX97821	Canola	mitochondrion	38.84	30.08
PGSC0003DMT400013650	Potato	cytosol	46.6	16.27

Protein Annotations

MapMan:18.8.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GlrX-like_pln_2	InterPro:Glutaredoxin
InterPro:IPR002109	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10168	PANTHER:PTHR10168:SF98	SUPFAM:SSF52833
TIGRFAMs:TIGR02189	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G100900	EnsemblPlants:TraesCS5B01G100900.1	TIGR:cd03419	SEG:seg

Description

No Description!

Coordinates

chr5B:-:134024601..134024912

Molecular Weight (calculated)

11126.1 Da

IEP (calculated)

8.948

GRAVY (calculated)

0.287

Length

103 amino acids

Sequence
(BLAST)

001: MDRVMKMASE RGVVIFTLNS CCMCHTVTRL FTDLGVNALV HELDHDPKGK EMEKALLKLL GKGPPVPAVF IGGKLVGGTN KVMSLHLGGE LVPMIRNAGA
101: LWL

Best Arabidopsis Sequence Match ( AT2G47880.1 )
(BLAST)

001: MDKVMRMSSE KGVVIFTKSS CCLCYAVQIL FRDLRVQPTI HEIDNDPDCR EIEKALLRLG CSTAVPAVFV GGKLVGSTNE VMSLHLSGSL VPLIKPYQSI
101: LY

Arabidopsis Description

GRXC13Glutaredoxin-C13 [Source:UniProtKB/Swiss-Prot;Acc:O82255]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.