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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 2
  • cytosol 2
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g008230.2.1
Solyc03g098200.2.1
Solyc04g009180.1.1
Solyc05g040050.1.1
Solyc06g065650.2.1
Solyc06g072310.2.1
Solyc06g073150.2.1
Solyc07g047690.1.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G15700.1 Solyc06g073150.2.1 AT1G22920.1 21798944
AT4G15700.1 Solyc11g017300.1.1 AT1G22920.1 21798944
AT4G15700.1 Solyc03g098200.2.1 AT1G73360.1 21798944
AT4G15700.1 Solyc06g072310.2.1 AT1G73360.1 21798944
AT4G15700.1 Solyc05g040050.1.1 AT2G05230.1 21798944
AT4G15700.1 Solyc07g047690.1.1 AT2G05230.1 21798944
AT4G15700.1 Solyc05g040050.1.1 AT2G05250.1 21798944
AT4G15700.1 Solyc07g047690.1.1 AT2G05250.1 21798944
AT4G15700.1 Solyc06g065650.2.1 AT4G32570.1 21798944
AT4G15700.1 Solyc01g008230.2.1 AT5G08330.1 21798944
AT4G15700.1 Solyc04g009180.1.1 AT5G08330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400058374 Potato cytosol 99.02 99.02
KRH02215 Soybean cytosol 80.39 80.39
KRH50911 Soybean cytosol 79.41 79.41
VIT_05s0020g01750.t01 Wine grape cytosol 78.43 77.67
KRH11237 Soybean cytosol 77.45 77.45
KRH21036 Soybean cytosol 76.47 76.47
Bra033504.1-P Field mustard cytosol 71.57 76.04
Bra002171.1-P Field mustard cytosol 75.49 75.49
CDX92597 Canola cytosol 75.49 75.49
CDY13904 Canola cytosol 75.49 75.49
Solyc06g054570.1.1 Tomato cytosol 75.49 74.76
AT4G15700.1 Thale cress cytosol 74.51 74.51
Bra012773.1-P Field mustard cytosol 74.51 74.51
CDX90576 Canola cytosol 74.51 74.51
CDY09747 Canola cytosol 74.51 74.51
AT4G15690.1 Thale cress cytosol 73.53 73.53
AT5G18600.1 Thale cress cytosol 73.53 73.53
Bra006467.1-P Field mustard cytosol 73.53 73.53
Bra023688.1-P Field mustard cytosol 73.53 73.53
CDX70828 Canola cytosol 73.53 73.53
CDX88929 Canola cytosol 73.53 73.53
CDY02610 Canola cytosol 73.53 73.53
CDY66332 Canola cytosol 73.53 73.53
AT4G15660.1 Thale cress cytosol, extracellular 72.55 72.55
AT4G15670.1 Thale cress cytosol 72.55 72.55
Bra033503.1-P Field mustard cytosol 72.55 72.55
CDY54294 Canola cytosol 72.55 72.55
CDY54296 Canola cytosol 72.55 72.55
CDY66333 Canola cytosol 72.55 72.55
CDY68328 Canola cytosol 72.55 72.55
Bra033499.1-P Field mustard cytosol 69.61 72.45
AT4G15680.1 Thale cress cytosol 71.57 71.57
Bra033501.1-P Field mustard cytosol 70.59 70.59
CDY22746 Canola cytosol 70.59 70.59
CDY69190 Canola cytosol 71.57 70.19
Bra038075.1-P Field mustard cytosol 69.61 69.61
Bra038076.1-P Field mustard cytosol, extracellular 68.63 69.31
CDY09078 Canola cytosol, extracellular 68.63 69.31
CDY22745 Canola cytosol, extracellular 68.63 69.31
CDY09079 Canola cytosol 67.65 67.65
Solyc01g067440.2.1 Tomato cytosol 61.76 61.76
Os01t0368900-01 Rice cytosol 61.76 61.16
Os12t0538600-00 Rice cytosol, extracellular 61.76 61.16
TraesCS5A01G094700.1 Wheat cytosol 61.76 61.16
TraesCS5A01G094900.1 Wheat extracellular 61.76 61.16
TraesCS5B01G100900.1 Wheat cytosol 61.76 61.16
TraesCS5D01G107200.1 Wheat cytosol 61.76 61.16
GSMUA_Achr5P00380_001 Banana extracellular 60.78 60.19
GSMUA_Achr8P09970_001 Banana cytosol 60.78 60.19
TraesCS5B01G101100.1 Wheat cytosol, extracellular 60.78 60.19
TraesCS5B01G101600.1 Wheat cytosol, extracellular 60.78 60.19
TraesCS5D01G108100.1 Wheat cytosol, extracellular 60.78 60.19
Zm00001d040837_P001 Maize cytosol 60.78 60.19
Zm00001d023873_P001 Maize cytosol 60.78 59.62
TraesCS5B01G049000.1 Wheat cytosol 50.0 59.3
HORVU5Hr1G025680.1 Barley cytosol 59.8 59.22
HORVU5Hr1G025710.1 Barley cytosol, extracellular 59.8 59.22
TraesCS5A01G095500.1 Wheat cytosol 59.8 59.22
TraesCS5D01G054000.1 Wheat cytosol 59.8 59.22
TraesCS5D01G107500.1 Wheat cytosol, extracellular 59.8 59.22
HORVU5Hr1G025610.1 Barley cytosol 59.8 58.65
Zm00001d023870_P001 Maize cytosol, extracellular 59.8 58.65
Zm00001d027695_P001 Maize cytosol 59.8 58.65
EES00746 Sorghum cytosol 58.82 58.25
GSMUA_Achr11P... Banana cytosol, extracellular 58.82 58.25
GSMUA_Achr11P... Banana cytosol 58.82 58.25
GSMUA_Achr11P... Banana cytosol, extracellular 58.82 58.25
TraesCS5A01G044100.1 Wheat cytosol 58.82 58.25
TraesCS5B01G048300.1 Wheat cytosol 58.82 58.25
TraesCS5D01G107300.1 Wheat cytosol 58.82 58.25
EES16092 Sorghum cytosol 59.8 58.1
Solyc09g074590.1.1 Tomato cytosol 57.84 57.84
TraesCS5A01G094600.1 Wheat cytosol 58.82 57.69
TraesCS5B01G100700.1 Wheat cytosol 58.82 57.69
Zm00001d023869_P001 Maize cytosol 58.82 57.69
GSMUA_Achr5P00370_001 Banana cytosol 57.84 57.28
TraesCS5B01G048400.1 Wheat cytosol 57.84 57.28
TraesCS5B01G049200.1 Wheat cytosol 57.84 57.28
TraesCS5B01G101000.1 Wheat cytosol 57.84 57.28
Zm00001d040836_P001 Maize cytosol 57.84 57.28
Solyc09g074600.1.1 Tomato cytosol 56.86 56.86
Os12t0538700-01 Rice cytosol 57.84 56.73
TraesCS5A01G094500.1 Wheat cytosol 57.84 56.73
TraesCS5B01G100600.1 Wheat cytosol 57.84 56.73
TraesCS5D01G106800.1 Wheat cytosol 57.84 56.73
TraesCS5D01G106900.1 Wheat cytosol 57.84 56.73
HORVU5Hr1G010960.1 Barley cytosol 56.86 56.31
TraesCS5A01G044400.1 Wheat cytosol 56.86 56.31
TraesCS5A01G044700.1 Wheat cytosol 56.86 56.31
TraesCS5B01G048600.1 Wheat cytosol 56.86 56.31
TraesCS5B01G048900.1 Wheat cytosol 56.86 56.31
TraesCS5B01G049100.1 Wheat cytosol 56.86 56.31
TraesCS5D01G054800.1 Wheat cytosol 56.86 56.31
TraesCS5D01G055100.1 Wheat cytosol 56.86 56.31
EES16093 Sorghum cytosol 57.84 56.19
HORVU5Hr1G033140.1 Barley cytosol 57.84 56.19
EES17138 Sorghum cytosol 57.84 55.66
EES00745 Sorghum cytosol 55.88 55.34
TraesCS5A01G044900.1 Wheat cytosol 55.88 55.34
TraesCS5A01G045000.1 Wheat cytosol 55.88 55.34
TraesCS5A01G094800.1 Wheat cytosol 55.88 55.34
TraesCS5D01G054200.1 Wheat cytosol 55.88 55.34
TraesCS5D01G054400.1 Wheat cytosol 55.88 55.34
TraesCS5D01G054900.1 Wheat cytosol 55.88 55.34
TraesCS5D01G055000.1 Wheat cytosol 55.88 55.34
TraesCS4D01G147300.1 Wheat cytosol 55.88 54.81
Solyc06g008760.1.1 Tomato cytosol 53.92 54.46
GSMUA_AchrUn_... Banana cytosol, extracellular 54.9 54.37
HORVU5Hr1G010870.1 Barley cytosol 54.9 54.37
HORVU5Hr1G010950.1 Barley cytosol 54.9 54.37
TraesCS5A01G044800.1 Wheat cytosol 54.9 54.37
OQU79243 Sorghum cytosol 56.86 54.21
Solyc04g011880.1.1 Tomato cytosol, plastid 53.92 53.92
Solyc06g008750.1.1 Tomato cytosol 53.92 53.92
HORVU5Hr1G025690.1 Barley cytosol 58.82 53.57
GSMUA_Achr1P26720_001 Banana cytosol 53.92 53.4
EES16097 Sorghum cytosol 55.88 53.27
TraesCS3A01G461900.1 Wheat cytosol, mitochondrion 53.92 52.88
TraesCS3A01G462200.1 Wheat cytosol 53.92 52.88
TraesCS3B01G504700.1 Wheat cytosol 53.92 52.88
TraesCS3D01G455600.1 Wheat cytosol, mitochondrion 53.92 52.88
Os11t0655900-01 Rice extracellular 55.88 52.78
GSMUA_Achr7P03690_001 Banana cytosol 52.94 52.43
GSMUA_Achr8P33660_001 Banana cytosol 52.94 52.43
Solyc04g011790.1.1 Tomato cytosol, plastid 51.96 51.96
Solyc04g053110.1.1 Tomato cytosol 51.96 51.96
TraesCS3A01G463000.1 Wheat cytosol 52.94 51.92
TraesCS3D01G456000.1 Wheat cytosol, mitochondrion 52.94 51.92
TraesCS3D01G456900.1 Wheat cytosol 52.94 51.92
Solyc04g011800.1.1 Tomato cytosol, plastid 50.98 50.98
Solyc04g011850.1.1 Tomato cytosol 50.98 50.98
Solyc09g074580.1.1 Tomato cytosol 50.98 50.98
TraesCS3B01G505300.1 Wheat cytosol 51.96 50.96
TraesCS3B01G506200.1 Wheat cytosol 51.96 50.96
Zm00001d023872_P001 Maize cytosol, mitochondrion 51.96 50.48
EES02025 Sorghum cytosol 52.94 50.47
Solyc04g011810.1.1 Tomato cytosol, plastid 50.0 50.0
Solyc04g011830.1.1 Tomato cytosol, plastid 50.0 50.0
Solyc04g011870.1.1 Tomato cytosol, plastid 50.0 50.0
TraesCS3A01G463200.1 Wheat cytosol 50.98 50.0
Zm00001d048720_P001 Maize cytosol 53.92 49.55
Os11t0656400-00 Rice cytosol, plastid 52.94 49.54
EES08918 Sorghum cytosol, plastid 50.98 49.52
Solyc05g051730.1.1 Tomato cytosol 50.0 49.51
Solyc04g011820.1.1 Tomato cytosol 46.08 49.47
Zm00001d048719_P001 Maize cytosol 52.94 49.09
TraesCS3D01G457200.1 Wheat cytosol 50.0 49.04
Solyc04g011860.1.1 Tomato cytosol, plastid 49.02 49.02
Os11t0656000-00 Rice cytosol, plastid 51.96 48.62
Os11t0656700-00 Rice cytosol, plastid 51.96 48.62
Solyc01g009910.1.1 Tomato mitochondrion, plastid 56.86 48.33
Os05t0149950-00 Rice cytosol, mitochondrion 53.92 48.25
Solyc09g074570.1.1 Tomato cytosol 50.0 48.11
HORVU3Hr1G099090.1 Barley cytosol 49.02 48.08
Solyc05g051720.1.1 Tomato cytosol 49.02 48.08
TraesCS3B01G506400.1 Wheat cytosol 49.02 48.08
TraesCS3B01G506500.1 Wheat cytosol 49.02 48.08
Solyc04g011780.1.1 Tomato extracellular 48.04 48.04
Solyc04g011840.1.1 Tomato cytosol 48.04 48.04
Zm00001d042187_P001 Maize cytosol 50.98 46.85
EES08919 Sorghum cytosol 50.0 46.79
EES16096 Sorghum cytosol 48.04 46.67
HORVU3Hr1G099050.2 Barley cytosol 49.02 46.3
TraesCS3A01G462900.1 Wheat cytosol, extracellular 47.06 46.15
Solyc01g009900.2.1 Tomato cytosol, plastid 53.92 45.83
HORVU5Hr1G025560.1 Barley cytosol 57.84 43.38
Solyc05g015910.1.1 Tomato cytosol 54.9 42.75
Os01t0936000-00 Rice cytosol 51.96 42.4
Solyc01g009890.1.1 Tomato cytosol, plastid 53.92 42.31
HORVU3Hr1G099150.1 Barley cytosol, extracellular 26.47 41.54
TraesCS3A01G462800.1 Wheat extracellular 33.33 41.46
TraesCS3B01G506000.1 Wheat mitochondrion 33.33 41.46
Solyc08g036570.1.1 Tomato cytosol 48.04 38.89
HORVU0Hr1G010190.2 Barley cytosol 37.25 36.19
Protein Annotations
MapMan:18.8.2Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0015035
GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055114InterPro:GlrX-like_pln_2InterPro:Glutaredoxin
InterPro:Glutaredoxin_subgrInterPro:IPR002109UniProt:K4AWZ5PFAM:PF00462PRINTS:PR00160PFscan:PS51354
PANTHER:PTHR10168PANTHER:PTHR10168:SF181SUPFAM:SSF52833EnsemblPlantsGene:Solyc01g067460.1EnsemblPlants:Solyc01g067460.1.1TIGRFAMs:TIGR02189
InterPro:Thioredoxin-like_sfUniParc:UPI0002762F73::::
Description
No Description!
Coordinates
chr1:+:76155675..76155983
Molecular Weight (calculated)
11277.9 Da
IEP (calculated)
7.980
GRAVY (calculated)
0.034
Length
102 amino acids
Sequence
(BLAST)
001: MERVSRMVSE KPVVIFSKNS CCMSHTIKSL FCDLGVHPSV HELDEMQRGR EIEAALSRLG CNPTVPAVFI GGELVGGENE VMSLHLQRSL KPMLKRAGAL
101: WV
Best Arabidopsis Sequence Match ( AT4G15700.1 )
(BLAST)
001: MENLQKMISE KSVVIFSKNS CCMSHTIKTL FLDLGVNPTI YELDEISRGK EIEHALAQLG CSPTVPVVFI GGQLVGGANQ VMSLHLNRSL VPMLKRAGAL
101: WL
Arabidopsis Description
GRXS3Monothiol glutaredoxin-S3 [Source:UniProtKB/Swiss-Prot;Acc:O23421]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.